RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 ZNF213O14771 459 aa7.19□□□□□ -1.26
UBFD1-204ENST00000565634 KHNYNO15037 678 aaKnown RBP7.19□□□□□ -1.26
UBFD1-204ENST00000565634 DYNC1LI2O43237 492 aaPredicted RBP7.19□□□□□ -1.26
UBFD1-204ENST00000565634 AVPR2P30518 371 aa7.19□□□□□ -1.26
UBFD1-204ENST00000565634 GTF2F1P35269 517 aaKnown RBP eCLIP7.19□□□□□ -1.26
UBFD1-204ENST00000565634 USP14P54578 494 aa7.19□□□□□ -1.26
UBFD1-204ENST00000565634 CHMP4BP1P59074 171 aa7.19□□□□□ -1.26
UBFD1-204ENST00000565634 EXOSC10Q01780 885 aaKnown RBP7.19□□□□□ -1.26
UBFD1-204ENST00000565634 ACVR2BQ13705 512 aa7.19□□□□□ -1.26
UBFD1-204ENST00000565634 COL9A2Q14055 689 aaPredicted RBP7.19□□□□□ -1.26
UBFD1-204ENST00000565634 RRP12Q5JTH9 1297 aaKnown RBP7.19□□□□□ -1.26
UBFD1-204ENST00000565634 TATDN1Q6P1N9 297 aa7.19□□□□□ -1.26
UBFD1-204ENST00000565634 RASGRP2Q7LDG7 609 aa7.19□□□□□ -1.26
UBFD1-204ENST00000565634 ERMP1Q7Z2K6 904 aa7.19□□□□□ -1.26
UBFD1-204ENST00000565634 ANKMY2Q8IV38 441 aa7.19□□□□□ -1.26
UBFD1-204ENST00000565634 SUGP1Q8IWZ8 645 aaKnown RBP7.19□□□□□ -1.26
UBFD1-204ENST00000565634 FAM200AQ8TCP9 573 aa7.19□□□□□ -1.26
UBFD1-204ENST00000565634 NEK9Q8TD19 979 aa7.19□□□□□ -1.26
UBFD1-204ENST00000565634 EDAQ92838 391 aa7.19□□□□□ -1.26
UBFD1-204ENST00000565634 DHX36Q9H2U1 1008 aaKnown RBP7.19□□□□□ -1.26
UBFD1-204ENST00000565634 CLDND1Q9NY35 253 aa7.19□□□□□ -1.26
UBFD1-204ENST00000565634 RIPK3Q9Y572 518 aa7.19□□□□□ -1.26
UBFD1-204ENST00000565634 WDR87Q6ZQQ6 2873 aa7.19□□□□□ -1.26
UBFD1-204ENST00000565634 RAD50Q92878 1312 aa7.19□□□□□ -1.26
UBFD1-204ENST00000565634 MYH4Q9Y623 1939 aa7.19□□□□□ -1.26
UBFD1-204ENST00000565634 NCOR2Q9Y618 2525 aa7.19□□□□□ -1.26
UBFD1-204ENST00000565634 MYO15AQ9UKN7 3530 aa7.18□□□□□ -1.26
UBFD1-204ENST00000565634 KMT2BQ9UMN6 2715 aaPredicted RBP7.18□□□□□ -1.26
UBFD1-204ENST00000565634 PRR23AA6NEV1 266 aa7.18□□□□□ -1.26
UBFD1-204ENST00000565634 ZNF16P17020 682 aaPredicted RBP7.18□□□□□ -1.26
UBFD1-204ENST00000565634 ADH6P28332 368 aa7.18□□□□□ -1.26
UBFD1-204ENST00000565634 CHRNA4P43681 627 aa7.18□□□□□ -1.26
UBFD1-204ENST00000565634 PCBP4P57723 403 aaKnown RBP7.18□□□□□ -1.26
UBFD1-204ENST00000565634 GJA9P57773 515 aa7.18□□□□□ -1.26
UBFD1-204ENST00000565634 CLDN10P78369 228 aa7.18□□□□□ -1.26
UBFD1-204ENST00000565634 TFAP4Q01664 338 aa7.18□□□□□ -1.26
UBFD1-204ENST00000565634 DPYDQ12882 1025 aa7.18□□□□□ -1.26
UBFD1-204ENST00000565634 KCTD2Q14681 263 aa7.18□□□□□ -1.26
UBFD1-204ENST00000565634 TCEAL5Q5H9L2 206 aa7.18□□□□□ -1.26
UBFD1-204ENST00000565634 RCSD1Q6JBY9 416 aa7.18□□□□□ -1.26
UBFD1-204ENST00000565634 TMED8Q6PL24 325 aaPredicted RBP7.18□□□□□ -1.26
UBFD1-204ENST00000565634 EEPD1Q7L9B9 569 aa7.18□□□□□ -1.26
UBFD1-204ENST00000565634 TTC6Q86TZ1 520 aa7.18□□□□□ -1.26
UBFD1-204ENST00000565634 ADHFE1Q8IWW8 467 aa7.18□□□□□ -1.26
UBFD1-204ENST00000565634 ADSSL1Q8N142 457 aa7.18□□□□□ -1.26
UBFD1-204ENST00000565634 SLC43A3Q8NBI5 491 aa7.18□□□□□ -1.26
UBFD1-204ENST00000565634 RMDN1Q96DB5 314 aa7.18□□□□□ -1.26
UBFD1-204ENST00000565634 DDX11Q96FC9 970 aa7.18□□□□□ -1.26
UBFD1-204ENST00000565634 NACAP1Q9BZK3 213 aa7.18□□□□□ -1.26
UBFD1-204ENST00000565634 IGFLR1Q9H665 355 aa7.18□□□□□ -1.26
UBFD1-204ENST00000565634 CABP5Q9NP86 173 aa7.18□□□□□ -1.26
UBFD1-204ENST00000565634 PDGFCQ9NRA1 345 aa7.18□□□□□ -1.26
UBFD1-204ENST00000565634 ZDHHC3Q9NYG2 299 aa7.18□□□□□ -1.26
UBFD1-204ENST00000565634 SERPINB13Q9UIV8 391 aa7.18□□□□□ -1.26
UBFD1-204ENST00000565634 MYH7BA7E2Y1 1941 aa7.18□□□□□ -1.26
UBFD1-204ENST00000565634 MICAL3Q7RTP6 2002 aa7.18□□□□□ -1.26
UBFD1-204ENST00000565634 GREB1LQ9C091 1923 aaPredicted RBP7.17□□□□□ -1.26
UBFD1-204ENST00000565634 CFAP47Q6ZTR5 3102 aa7.17□□□□□ -1.26
UBFD1-204ENST00000565634 IGKV6D-41A0A0C4DH26 115 aa7.17□□□□□ -1.26
UBFD1-204ENST00000565634 LINC01553A4QN01 128 aa7.17□□□□□ -1.26
UBFD1-204ENST00000565634 ORC4O43929 436 aa7.17□□□□□ -1.26
UBFD1-204ENST00000565634 RANBP6O60518 1105 aaKnown RBP7.17□□□□□ -1.26
UBFD1-204ENST00000565634 HLA-DOAP06340 250 aa7.17□□□□□ -1.26
UBFD1-204ENST00000565634 ACTN1P12814 892 aa7.17□□□□□ -1.26
UBFD1-204ENST00000565634 LTBRP36941 435 aa7.17□□□□□ -1.26
UBFD1-204ENST00000565634 TXLNAP40222 546 aa7.17□□□□□ -1.26
UBFD1-204ENST00000565634 STAT3P40763 770 aa7.17□□□□□ -1.26
UBFD1-204ENST00000565634 HERC4Q5GLZ8 1057 aaPredicted RBP7.17□□□□□ -1.26
UBFD1-204ENST00000565634 CASC1Q6TDU7 716 aa7.17□□□□□ -1.26
UBFD1-204ENST00000565634 MFSD6Q6ZSS7 791 aa7.17□□□□□ -1.26
UBFD1-204ENST00000565634 FRMD5Q7Z6J6 570 aa7.17□□□□□ -1.26
UBFD1-204ENST00000565634 RAB11FIP4Q86YS3 637 aa7.17□□□□□ -1.26
UBFD1-204ENST00000565634 MB21D2Q8IYB1 491 aaPredicted RBP7.17□□□□□ -1.26
UBFD1-204ENST00000565634 ABRAQ8N0Z2 381 aa7.17□□□□□ -1.26
UBFD1-204ENST00000565634 CPXCR1Q8N123 301 aa7.17□□□□□ -1.26
UBFD1-204ENST00000565634 FBXL6Q8N531 539 aa7.17□□□□□ -1.26
UBFD1-204ENST00000565634 IGDCC4Q8TDY8 1250 aa7.17□□□□□ -1.26
UBFD1-204ENST00000565634 ZDHHC1Q8WTX9 485 aa7.17□□□□□ -1.26
UBFD1-204ENST00000565634 STAG1Q8WVM7 1258 aa7.17□□□□□ -1.26
UBFD1-204ENST00000565634 JAKMIP1Q96N16 626 aaKnown RBP7.17□□□□□ -1.26
UBFD1-204ENST00000565634 SLC9A7Q96T83 725 aa7.17□□□□□ -1.26
UBFD1-204ENST00000565634 C22orf23Q9BZE7 217 aa7.17□□□□□ -1.26
UBFD1-204ENST00000565634 UPF3BQ9BZI7 483 aaKnown RBP7.17□□□□□ -1.26
UBFD1-204ENST00000565634 UPF3AQ9H1J1 476 aaKnown RBP7.17□□□□□ -1.26
UBFD1-204ENST00000565634 MKNK2Q9HBH9 465 aa7.17□□□□□ -1.26
UBFD1-204ENST00000565634 SPC25Q9HBM1 224 aa7.17□□□□□ -1.26
UBFD1-204ENST00000565634 NRBP1Q9UHY1 535 aa7.17□□□□□ -1.26
UBFD1-204ENST00000565634 BRPF3Q9ULD4 1205 aa7.17□□□□□ -1.26
UBFD1-204ENST00000565634 KIAA1024Q9UPX6 916 aa7.17□□□□□ -1.26
UBFD1-204ENST00000565634 GVINP1Q7Z2Y8 2422 aa7.17□□□□□ -1.26
UBFD1-204ENST00000565634 ACACBO00763 2458 aa7.17□□□□□ -1.26
UBFD1-204ENST00000565634 DMXL1Q9Y485 3027 aa7.17□□□□□ -1.26
UBFD1-204ENST00000565634 STXBP3O00186 592 aa7.16□□□□□ -1.26
UBFD1-204ENST00000565634 LINC01565O15544 149 aa7.16□□□□□ -1.26
UBFD1-204ENST00000565634 EFSO43281 561 aa7.16□□□□□ -1.26
UBFD1-204ENST00000565634 LGR5O75473 907 aa7.16□□□□□ -1.26
UBFD1-204ENST00000565634 REC8O95072 547 aa7.16□□□□□ -1.26
UBFD1-204ENST00000565634 IQCF3P0C7M6 154 aa7.16□□□□□ -1.26
UBFD1-204ENST00000565634 FAM157BP0CG42 384 aa7.16□□□□□ -1.26
UBFD1-204ENST00000565634 ITGB7P26010 798 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms