RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 AKT1S1Q96B36 256 aa15.27■□□□□ 0.04
GTF3C1-203ENST00000562609 ELAC2Q9BQ52 826 aaKnown RBP15.27■□□□□ 0.04
GTF3C1-203ENST00000562609 UBA5Q9GZZ9 404 aa15.27■□□□□ 0.04
GTF3C1-203ENST00000562609 GGT7Q9UJ14 662 aa15.27■□□□□ 0.04
GTF3C1-203ENST00000562609 DLEC1Q9Y238 1755 aa15.27■□□□□ 0.04
GTF3C1-203ENST00000562609 KLRF2D3W0D1 207 aa15.27■□□□□ 0.03
GTF3C1-203ENST00000562609 KIF11P52732 1056 aa15.27■□□□□ 0.03
GTF3C1-203ENST00000562609 NCALDP61601 193 aa15.27■□□□□ 0.03
GTF3C1-203ENST00000562609 KRT71Q3SY84 523 aa15.27■□□□□ 0.03
GTF3C1-203ENST00000562609 ZNF658Q5TYW1 1059 aaPredicted RBP15.27■□□□□ 0.03
GTF3C1-203ENST00000562609 KIF2BQ8N4N8 673 aa15.27■□□□□ 0.03
GTF3C1-203ENST00000562609 LRRC45Q96CN5 670 aa15.27■□□□□ 0.03
GTF3C1-203ENST00000562609 CDK5RAP2Q96SN8 1893 aa15.27■□□□□ 0.03
GTF3C1-203ENST00000562609 EXOC1Q9NV70 894 aa15.27■□□□□ 0.03
GTF3C1-203ENST00000562609 MAGEC2Q9UBF1 373 aaPredicted RBP15.27■□□□□ 0.03
GTF3C1-203ENST00000562609 ANKRD31Q8N7Z5 1873 aa15.27■□□□□ 0.03
GTF3C1-203ENST00000562609 NAV1Q8NEY1 1877 aa15.27■□□□□ 0.03
GTF3C1-203ENST00000562609 UBOX5O94941 541 aa15.26■□□□□ 0.03
GTF3C1-203ENST00000562609 EEF1GP26641 437 aaKnown RBP15.26■□□□□ 0.03
GTF3C1-203ENST00000562609 PMS1P54277 932 aaKnown RBP15.26■□□□□ 0.03
GTF3C1-203ENST00000562609 GRM4Q14833 912 aa15.26■□□□□ 0.03
GTF3C1-203ENST00000562609 ANO7Q6IWH7 933 aa15.26■□□□□ 0.03
GTF3C1-203ENST00000562609 C16orf86Q6ZW13 317 aa15.26■□□□□ 0.03
GTF3C1-203ENST00000562609 DDX42Q86XP3 938 aaKnown RBP eCLIP15.26■□□□□ 0.03
GTF3C1-203ENST00000562609 CCDC155Q8N6L0 562 aa15.26■□□□□ 0.03
GTF3C1-203ENST00000562609 RBM41Q96IZ5 413 aaKnown RBP15.26■□□□□ 0.03
GTF3C1-203ENST00000562609 ZNF317Q96PQ6 595 aaPredicted RBP15.26■□□□□ 0.03
GTF3C1-203ENST00000562609 AKR1B10O60218 316 aa15.26■□□□□ 0.03
GTF3C1-203ENST00000562609 PDHA1P08559 390 aa15.26■□□□□ 0.03
GTF3C1-203ENST00000562609 KRT16P08779 473 aa15.26■□□□□ 0.03
GTF3C1-203ENST00000562609 ERVK-9P63128 1117 aa15.26■□□□□ 0.03
GTF3C1-203ENST00000562609 CUL3Q13618 768 aa15.26■□□□□ 0.03
GTF3C1-203ENST00000562609 IL17AQ16552 155 aa15.26■□□□□ 0.03
GTF3C1-203ENST00000562609 LRRC23Q53EV4 343 aaPredicted RBP15.26■□□□□ 0.03
GTF3C1-203ENST00000562609 PIGWQ7Z7B1 504 aa15.26■□□□□ 0.03
GTF3C1-203ENST00000562609 C2CD5Q86YS7 1000 aa15.26■□□□□ 0.03
GTF3C1-203ENST00000562609 TBC1D5Q92609 795 aa15.26■□□□□ 0.03
GTF3C1-203ENST00000562609 MTMR8Q96EF0 704 aa15.26■□□□□ 0.03
GTF3C1-203ENST00000562609 PSMD1Q99460 953 aa15.26■□□□□ 0.03
GTF3C1-203ENST00000562609 TRIM4Q9C037 500 aa15.26■□□□□ 0.03
GTF3C1-203ENST00000562609 ECT2Q9H8V3 914 aa15.26■□□□□ 0.03
GTF3C1-203ENST00000562609 SAMD15Q9P1V8 674 aa15.26■□□□□ 0.03
GTF3C1-203ENST00000562609 ARHGAP20Q9P2F6 1191 aa15.26■□□□□ 0.03
GTF3C1-203ENST00000562609 RNF14Q9UBS8 474 aa15.26■□□□□ 0.03
GTF3C1-203ENST00000562609 FBXL5Q9UKA1 691 aa15.26■□□□□ 0.03
GTF3C1-203ENST00000562609 FRMPD2Q68DX3 1309 aaPredicted RBP15.26■□□□□ 0.03
GTF3C1-203ENST00000562609 FAM163BP0C2L3 166 aa15.25■□□□□ 0.03
GTF3C1-203ENST00000562609 RARAP10276 462 aa15.25■□□□□ 0.03
GTF3C1-203ENST00000562609 ECHS1P30084 290 aa15.25■□□□□ 0.03
GTF3C1-203ENST00000562609 CHRNA5P30532 468 aa15.25■□□□□ 0.03
GTF3C1-203ENST00000562609 KIAA0825Q8IV33 1275 aa15.25■□□□□ 0.03
GTF3C1-203ENST00000562609 BLIDQ8IZY5 108 aa15.25■□□□□ 0.03
GTF3C1-203ENST00000562609 LRRC47Q8N1G4 583 aaKnown RBP15.25■□□□□ 0.03
GTF3C1-203ENST00000562609 MTRQ99707 1265 aa15.25■□□□□ 0.03
GTF3C1-203ENST00000562609 ISCUQ9H1K1 167 aa15.25■□□□□ 0.03
GTF3C1-203ENST00000562609 ADAM22Q9P0K1 906 aa15.25■□□□□ 0.03
GTF3C1-203ENST00000562609 ROBO3Q96MS0 1386 aa15.25■□□□□ 0.03
GTF3C1-203ENST00000562609 SNED1Q8TER0 1413 aa15.25■□□□□ 0.03
GTF3C1-203ENST00000562609 FAM196BA6NMK8 535 aa15.25■□□□□ 0.03
GTF3C1-203ENST00000562609 ASAP2O43150 1006 aa15.25■□□□□ 0.03
GTF3C1-203ENST00000562609 NPR1P16066 1061 aa15.25■□□□□ 0.03
GTF3C1-203ENST00000562609 EIF4A3P38919 411 aaKnown RBP15.25■□□□□ 0.03
GTF3C1-203ENST00000562609 CDK17Q00537 523 aa15.25■□□□□ 0.03
GTF3C1-203ENST00000562609 CACNA2D4Q7Z3S7 1137 aa15.25■□□□□ 0.03
GTF3C1-203ENST00000562609 LRRC34Q8IZ02 419 aa15.25■□□□□ 0.03
GTF3C1-203ENST00000562609 RETREG2Q8NC44 543 aa15.25■□□□□ 0.03
GTF3C1-203ENST00000562609 KLHL29Q96CT2 875 aa15.25■□□□□ 0.03
GTF3C1-203ENST00000562609 COA1Q9GZY4 146 aa15.25■□□□□ 0.03
GTF3C1-203ENST00000562609 CNOT10Q9H9A5 744 aaKnown RBP15.25■□□□□ 0.03
GTF3C1-203ENST00000562609 LRRC4CQ9HCJ2 640 aa15.25■□□□□ 0.03
GTF3C1-203ENST00000562609 USP40Q9NVE5 1235 aa15.25■□□□□ 0.03
GTF3C1-203ENST00000562609 WDR35Q9P2L0 1181 aa15.25■□□□□ 0.03
GTF3C1-203ENST00000562609 GAKO14976 1311 aa15.25■□□□□ 0.03
GTF3C1-203ENST00000562609 GOLGA6L10A0A0M3HER8 536 aa15.25■□□□□ 0.03
GTF3C1-203ENST00000562609 USP17L5A8MUK1 530 aa15.25■□□□□ 0.03
GTF3C1-203ENST00000562609 MMEP08473 750 aa15.25■□□□□ 0.03
GTF3C1-203ENST00000562609 CNGA1P29973 690 aa15.25■□□□□ 0.03
GTF3C1-203ENST00000562609 ALDH3A1P30838 453 aa15.25■□□□□ 0.03
GTF3C1-203ENST00000562609 MAGEA1P43355 309 aa15.25■□□□□ 0.03
GTF3C1-203ENST00000562609 CCNG1P51959 295 aa15.25■□□□□ 0.03
GTF3C1-203ENST00000562609 NFIAQ12857 509 aa15.25■□□□□ 0.03
GTF3C1-203ENST00000562609 SEPT2Q15019 361 aa15.25■□□□□ 0.03
GTF3C1-203ENST00000562609 KCTD19Q17RG1 926 aaPredicted RBP15.25■□□□□ 0.03
GTF3C1-203ENST00000562609 INF2Q27J81 1249 aa15.25■□□□□ 0.03
GTF3C1-203ENST00000562609 C1QTNF12Q5T7M4 302 aa15.25■□□□□ 0.03
GTF3C1-203ENST00000562609 TRIM47Q96LD4 638 aa15.25■□□□□ 0.03
GTF3C1-203ENST00000562609 NOX5Q96PH1 765 aa15.25■□□□□ 0.03
GTF3C1-203ENST00000562609 SYT15Q9BQS2 421 aa15.25■□□□□ 0.03
GTF3C1-203ENST00000562609 TUBGCP2Q9BSJ2 902 aa15.25■□□□□ 0.03
GTF3C1-203ENST00000562609 MYH1P12882 1939 aa15.25■□□□□ 0.03
GTF3C1-203ENST00000562609 NPTXRO95502 500 aa15.24■□□□□ 0.03
GTF3C1-203ENST00000562609 PLCG2P16885 1265 aa15.24■□□□□ 0.03
GTF3C1-203ENST00000562609 PCK1P35558 622 aa15.24■□□□□ 0.03
GTF3C1-203ENST00000562609 ATP11AP98196 1134 aa15.24■□□□□ 0.03
GTF3C1-203ENST00000562609 TCP10Q12799 353 aa15.24■□□□□ 0.03
GTF3C1-203ENST00000562609 NCAPG2Q86XI2 1143 aa15.24■□□□□ 0.03
GTF3C1-203ENST00000562609 ZFPM1Q8IX07 1006 aa15.24■□□□□ 0.03
GTF3C1-203ENST00000562609 PNMA2Q9UL42 364 aa15.24■□□□□ 0.03
GTF3C1-203ENST00000562609 ASB3Q9Y575 518 aa15.24■□□□□ 0.03
GTF3C1-203ENST00000562609 PALM3A6NDB9 673 aaPredicted RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms