RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 TMEM150BA6NC51 233 aa20.08■□□□□ 0.81
HDDC3-205ENST00000559898 FAM205CA6NFA0 338 aa20.08■□□□□ 0.81
HDDC3-205ENST00000559898 VTNP04004 478 aa20.08■□□□□ 0.81
HDDC3-205ENST00000559898 EARS2Q5JPH6 523 aaKnown RBP20.08■□□□□ 0.81
HDDC3-205ENST00000559898 IER5Q5VY09 327 aa20.08■□□□□ 0.81
HDDC3-205ENST00000559898 TMEM192Q8IY95 271 aa20.08■□□□□ 0.81
HDDC3-205ENST00000559898 CKAP2LQ8IYA6 745 aa20.08■□□□□ 0.81
HDDC3-205ENST00000559898 PCDHA10Q9Y5I2 948 aa20.08■□□□□ 0.81
HDDC3-205ENST00000559898 SLC37A4O43826 429 aa20.07■□□□□ 0.8
HDDC3-205ENST00000559898 PFKFB2O60825 505 aa20.07■□□□□ 0.8
HDDC3-205ENST00000559898 PSAPP07602 524 aa20.07■□□□□ 0.8
HDDC3-205ENST00000559898 SLC26A2P50443 739 aa20.07■□□□□ 0.8
HDDC3-205ENST00000559898 USP11P51784 963 aa20.07■□□□□ 0.8
HDDC3-205ENST00000559898 CLCN3P51790 818 aa20.07■□□□□ 0.8
HDDC3-205ENST00000559898 KRT76Q01546 638 aa20.07■□□□□ 0.8
HDDC3-205ENST00000559898 INF2Q27J81 1249 aa20.07■□□□□ 0.8
HDDC3-205ENST00000559898 ZNF484Q5JVG2 852 aa20.07■□□□□ 0.8
HDDC3-205ENST00000559898 MCTP2Q6DN12 878 aa20.07■□□□□ 0.8
HDDC3-205ENST00000559898 DAGLBQ8NCG7 672 aa20.07■□□□□ 0.8
HDDC3-205ENST00000559898 ZNF689Q96CS4 500 aaPredicted RBP20.07■□□□□ 0.8
HDDC3-205ENST00000559898 IL17RAQ96F46 866 aa20.07■□□□□ 0.8
HDDC3-205ENST00000559898 SH2D3AQ9BRG2 576 aa20.07■□□□□ 0.8
HDDC3-205ENST00000559898 ERVK-5Q9HDB9 667 aa20.07■□□□□ 0.8
HDDC3-205ENST00000559898 DISC1Q9NRI5 854 aa20.07■□□□□ 0.8
HDDC3-205ENST00000559898 SAMM50Q9Y512 469 aa20.07■□□□□ 0.8
HDDC3-205ENST00000559898 TTC28Q96AY4 2481 aa20.07■□□□□ 0.8
HDDC3-205ENST00000559898 MYO7AQ13402 2215 aa20.06■□□□□ 0.8
HDDC3-205ENST00000559898 PSMD10O75832 226 aa20.06■□□□□ 0.8
HDDC3-205ENST00000559898 CSPG5O95196 566 aa20.06■□□□□ 0.8
HDDC3-205ENST00000559898 FDPSP14324 419 aaKnown RBP20.06■□□□□ 0.8
HDDC3-205ENST00000559898 ST3GAL1Q11201 340 aa20.06■□□□□ 0.8
HDDC3-205ENST00000559898 GPM6BQ13491 265 aa20.06■□□□□ 0.8
HDDC3-205ENST00000559898 KIZQ2M2Z5 673 aa20.06■□□□□ 0.8
HDDC3-205ENST00000559898 Q4G0T1 1027 aa20.06■□□□□ 0.8
HDDC3-205ENST00000559898 LRRC71Q8N4P6 559 aa20.06■□□□□ 0.8
HDDC3-205ENST00000559898 LINC01465Q8N7H1 131 aa20.06■□□□□ 0.8
HDDC3-205ENST00000559898 BBXQ8WY36 941 aaPredicted RBP20.06■□□□□ 0.8
HDDC3-205ENST00000559898 OSMRQ99650 979 aa20.06■□□□□ 0.8
HDDC3-205ENST00000559898 PHF20Q9BVI0 1012 aa20.06■□□□□ 0.8
HDDC3-205ENST00000559898 SLKQ9H2G2 1235 aaPredicted RBP20.06■□□□□ 0.8
HDDC3-205ENST00000559898 BRWD1Q9NSI6 2320 aa20.06■□□□□ 0.8
HDDC3-205ENST00000559898 COL1A2P08123 1366 aa20.06■□□□□ 0.8
HDDC3-205ENST00000559898 ADGRA3Q8IWK6 1321 aa20.05■□□□□ 0.8
HDDC3-205ENST00000559898 KDM3AQ9Y4C1 1321 aa20.05■□□□□ 0.8
HDDC3-205ENST00000559898 FNDC1Q4ZHG4 1894 aaPredicted RBP20.05■□□□□ 0.8
HDDC3-205ENST00000559898 H3BNC9 293 aa20.05■□□□□ 0.8
HDDC3-205ENST00000559898 GPR32O75388 356 aa20.05■□□□□ 0.8
HDDC3-205ENST00000559898 DGKIO75912 1065 aa20.05■□□□□ 0.8
HDDC3-205ENST00000559898 STBD1O95210 358 aa20.05■□□□□ 0.8
HDDC3-205ENST00000559898 PRKCEQ02156 737 aa20.05■□□□□ 0.8
HDDC3-205ENST00000559898 NFX1Q12986 1120 aaKnown RBP20.05■□□□□ 0.8
HDDC3-205ENST00000559898 PAK2Q13177 524 aa20.05■□□□□ 0.8
HDDC3-205ENST00000559898 ME3Q16798 604 aa20.05■□□□□ 0.8
HDDC3-205ENST00000559898 PAN2Q504Q3 1202 aaKnown RBP20.05■□□□□ 0.8
HDDC3-205ENST00000559898 LRCH2Q5VUJ6 765 aa20.05■□□□□ 0.8
HDDC3-205ENST00000559898 B3GNT9Q6UX72 402 aa20.05■□□□□ 0.8
HDDC3-205ENST00000559898 SMAP1Q8IYB5 467 aaPredicted RBP20.05■□□□□ 0.8
HDDC3-205ENST00000559898 ETNPPLQ8TBG4 499 aa20.05■□□□□ 0.8
HDDC3-205ENST00000559898 SYMPKQ92797 1274 aaKnown RBP20.05■□□□□ 0.8
HDDC3-205ENST00000559898 MBOAT7Q96N66 472 aa20.05■□□□□ 0.8
HDDC3-205ENST00000559898 HCSTQ9UBK5 93 aa20.05■□□□□ 0.8
HDDC3-205ENST00000559898 CYP3A7-CYP3A51PA0A087WV96 503 aa20.04■□□□□ 0.8
HDDC3-205ENST00000559898 WDR64B1ANS9 1081 aa20.04■□□□□ 0.8
HDDC3-205ENST00000559898 M0QZ92 97 aa20.04■□□□□ 0.8
HDDC3-205ENST00000559898 GAS7O60861 476 aa20.04■□□□□ 0.8
HDDC3-205ENST00000559898 CYP3A7P24462 503 aa20.04■□□□□ 0.8
HDDC3-205ENST00000559898 CTNNB1P35222 781 aa20.04■□□□□ 0.8
HDDC3-205ENST00000559898 FOSBP53539 338 aa20.04■□□□□ 0.8
HDDC3-205ENST00000559898 DRP2Q13474 957 aa20.04■□□□□ 0.8
HDDC3-205ENST00000559898 FAM228AQ86W67 206 aa20.04■□□□□ 0.8
HDDC3-205ENST00000559898 NME8Q8N427 588 aa20.04■□□□□ 0.8
HDDC3-205ENST00000559898 FIBCD1Q8N539 461 aa20.04■□□□□ 0.8
HDDC3-205ENST00000559898 METTL13Q8N6R0 699 aa20.04■□□□□ 0.8
HDDC3-205ENST00000559898 TEKT3Q9BXF9 490 aa20.04■□□□□ 0.8
HDDC3-205ENST00000559898 TSPYL2Q9H2G4 693 aaPredicted RBP20.04■□□□□ 0.8
HDDC3-205ENST00000559898 LMCD1Q9NZU5 365 aa20.04■□□□□ 0.8
HDDC3-205ENST00000559898 MRPL42Q9Y6G3 142 aaKnown RBP20.04■□□□□ 0.8
HDDC3-205ENST00000559898 PLXNA4Q9HCM2 1894 aa20.03■□□□□ 0.8
HDDC3-205ENST00000559898 EML1O00423 815 aa20.03■□□□□ 0.8
HDDC3-205ENST00000559898 GRM6O15303 877 aa20.03■□□□□ 0.8
HDDC3-205ENST00000559898 OATP04181 439 aa20.03■□□□□ 0.8
HDDC3-205ENST00000559898 HLA-CQ95604 372 aa20.03■□□□□ 0.8
HDDC3-205ENST00000559898 CEP89Q96ST8 783 aa20.03■□□□□ 0.8
HDDC3-205ENST00000559898 UHRF1Q96T88 793 aaPredicted RBP20.03■□□□□ 0.8
HDDC3-205ENST00000559898 RIT2Q99578 217 aa20.03■□□□□ 0.8
HDDC3-205ENST00000559898 ST3GAL5Q9UNP4 418 aa20.03■□□□□ 0.8
HDDC3-205ENST00000559898 SQORQ9Y6N5 450 aa20.03■□□□□ 0.8
HDDC3-205ENST00000559898 TNFRSF10AO00220 468 aa20.02■□□□□ 0.8
HDDC3-205ENST00000559898 WNT7AO00755 349 aa20.02■□□□□ 0.8
HDDC3-205ENST00000559898 JAK2O60674 1132 aa20.02■□□□□ 0.8
HDDC3-205ENST00000559898 FGFR4P22455 802 aa20.02■□□□□ 0.8
HDDC3-205ENST00000559898 BTG3Q14201 252 aaPredicted RBP20.02■□□□□ 0.8
HDDC3-205ENST00000559898 NONOQ15233 471 aaKnown RBP eCLIP20.02■□□□□ 0.8
HDDC3-205ENST00000559898 LETM2Q2VYF4 491 aa20.02■□□□□ 0.8
HDDC3-205ENST00000559898 ERICH6BQ5W0A0 696 aa20.02■□□□□ 0.8
HDDC3-205ENST00000559898 EFCAB12Q6NXP0 572 aa20.02■□□□□ 0.8
HDDC3-205ENST00000559898 TNPO1Q92973 898 aaKnown RBP20.02■□□□□ 0.8
HDDC3-205ENST00000559898 MRPL38Q96DV4 380 aaKnown RBP20.02■□□□□ 0.8
HDDC3-205ENST00000559898 TCEAL9Q9UHQ7 104 aa20.02■□□□□ 0.8
HDDC3-205ENST00000559898 STK36Q9NRP7 1315 aa20.02■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms