RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 TTC38Q5R3I4 469 aa6.91□□□□□ -1.3
SYNE2-210ENST00000553455 TMEM240Q5SV17 173 aa6.91□□□□□ -1.3
SYNE2-210ENST00000553455 OLFML2BQ68BL8 750 aa6.91□□□□□ -1.3
SYNE2-210ENST00000553455 ESPNLQ6ZVH7 1005 aa6.91□□□□□ -1.3
SYNE2-210ENST00000553455 KANSL1Q7Z3B3 1105 aa6.91□□□□□ -1.3
SYNE2-210ENST00000553455 FAM168AQ92567 244 aa6.91□□□□□ -1.3
SYNE2-210ENST00000553455 E2F7Q96AV8 911 aa6.91□□□□□ -1.3
SYNE2-210ENST00000553455 MAML3Q96JK9 1138 aa6.91□□□□□ -1.3
SYNE2-210ENST00000553455 SYT3Q9BQG1 590 aa6.91□□□□□ -1.3
SYNE2-210ENST00000553455 MYL10Q9BUA6 226 aa6.91□□□□□ -1.3
SYNE2-210ENST00000553455 ANO3Q9BYT9 981 aa6.91□□□□□ -1.3
SYNE2-210ENST00000553455 PRDM12Q9H4Q4 367 aa6.91□□□□□ -1.3
SYNE2-210ENST00000553455 TCF7L1Q9HCS4 588 aa6.91□□□□□ -1.3
SYNE2-210ENST00000553455 MKS1Q9NXB0 559 aa6.91□□□□□ -1.3
SYNE2-210ENST00000553455 ARHGAP28Q9P2N2 729 aa6.91□□□□□ -1.3
SYNE2-210ENST00000553455 ZNF180Q9UJW8 692 aa6.91□□□□□ -1.3
SYNE2-210ENST00000553455 LUC7L2Q9Y383 392 aaKnown RBP6.91□□□□□ -1.3
SYNE2-210ENST00000553455 MYOCOSA0A1B0GUC4 107 aa6.9□□□□□ -1.3
SYNE2-210ENST00000553455 PRPF6O94906 941 aaKnown RBP6.9□□□□□ -1.3
SYNE2-210ENST00000553455 RGS3P49796 1198 aa6.9□□□□□ -1.3
SYNE2-210ENST00000553455 NKX3-2P78367 333 aa6.9□□□□□ -1.3
SYNE2-210ENST00000553455 SLC6A3Q01959 620 aa6.9□□□□□ -1.3
SYNE2-210ENST00000553455 CT83Q5H943 113 aa6.9□□□□□ -1.3
SYNE2-210ENST00000553455 LRSAM1Q6UWE0 723 aa6.9□□□□□ -1.3
SYNE2-210ENST00000553455 UNQ6494/PRO21346Q6UXR6 183 aa6.9□□□□□ -1.3
SYNE2-210ENST00000553455 TMC5Q6UXY8 1006 aa6.9□□□□□ -1.3
SYNE2-210ENST00000553455 CD300LDQ6UXZ3 194 aa6.9□□□□□ -1.3
SYNE2-210ENST00000553455 CHPFQ8IZ52 775 aa6.9□□□□□ -1.3
SYNE2-210ENST00000553455 DTX3Q8N9I9 347 aa6.9□□□□□ -1.3
SYNE2-210ENST00000553455 TUBGCP5Q96RT8 1024 aa6.9□□□□□ -1.3
SYNE2-210ENST00000553455 RNF38Q9H0F5 515 aa6.9□□□□□ -1.3
SYNE2-210ENST00000553455 CNTD2Q9H8S5 307 aa6.9□□□□□ -1.3
SYNE2-210ENST00000553455 LUC7LQ9NQ29 371 aaKnown RBP6.9□□□□□ -1.3
SYNE2-210ENST00000553455 INCENPQ9NQS7 918 aa6.9□□□□□ -1.3
SYNE2-210ENST00000553455 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.9□□□□□ -1.3
SYNE2-210ENST00000553455 IP6K2Q9UHH9 426 aa6.9□□□□□ -1.3
SYNE2-210ENST00000553455 TMPRSS11EQ9UL52 423 aa6.9□□□□□ -1.3
SYNE2-210ENST00000553455 PRSS38A1L453 326 aa6.89□□□□□ -1.31
SYNE2-210ENST00000553455 PRPF3O43395 683 aaKnown RBP6.89□□□□□ -1.31
SYNE2-210ENST00000553455 RFPL1O75677 317 aa6.89□□□□□ -1.31
SYNE2-210ENST00000553455 NCAM1P13591 858 aa6.89□□□□□ -1.31
SYNE2-210ENST00000553455 ATF2P15336 505 aa6.89□□□□□ -1.31
SYNE2-210ENST00000553455 ZSCAN20P17040 1043 aaPredicted RBP6.89□□□□□ -1.31
SYNE2-210ENST00000553455 RECQLP46063 649 aaPredicted RBP6.89□□□□□ -1.31
SYNE2-210ENST00000553455 MTNR1BP49286 362 aa6.89□□□□□ -1.31
SYNE2-210ENST00000553455 CDR1P51861 262 aa6.89□□□□□ -1.31
SYNE2-210ENST00000553455 SRSF3P84103 164 aaKnown RBP6.89□□□□□ -1.31
SYNE2-210ENST00000553455 SRSF2Q01130 221 aaKnown RBP6.89□□□□□ -1.31
SYNE2-210ENST00000553455 PITRM1Q5JRX3 1037 aa6.89□□□□□ -1.31
SYNE2-210ENST00000553455 PRAMEF9Q5VWM5 478 aa6.89□□□□□ -1.31
SYNE2-210ENST00000553455 VASNQ6EMK4 673 aa6.89□□□□□ -1.31
SYNE2-210ENST00000553455 SLFN12LQ6IEE8 588 aa6.89□□□□□ -1.31
SYNE2-210ENST00000553455 KIAA1841Q6NSI8 718 aa6.89□□□□□ -1.31
SYNE2-210ENST00000553455 CCDC62Q6P9F0 684 aa6.89□□□□□ -1.31
SYNE2-210ENST00000553455 KCNK18Q7Z418 384 aa6.89□□□□□ -1.31
SYNE2-210ENST00000553455 ZC3H18Q86VM9 953 aaKnown RBP6.89□□□□□ -1.31
SYNE2-210ENST00000553455 LYSMD2Q8IV50 215 aa6.89□□□□□ -1.31
SYNE2-210ENST00000553455 CMTR2Q8IYT2 770 aaKnown RBP6.89□□□□□ -1.31
SYNE2-210ENST00000553455 CPA6Q8N4T0 437 aa6.89□□□□□ -1.31
SYNE2-210ENST00000553455 IGDCC4Q8TDY8 1250 aa6.89□□□□□ -1.31
SYNE2-210ENST00000553455 JPH3Q8WXH2 748 aaPredicted RBP6.89□□□□□ -1.31
SYNE2-210ENST00000553455 EAF2Q96CJ1 260 aaPredicted RBP6.89□□□□□ -1.31
SYNE2-210ENST00000553455 C8orf48Q96LL4 319 aa6.89□□□□□ -1.31
SYNE2-210ENST00000553455 NGRNQ9NPE2 291 aaKnown RBP6.89□□□□□ -1.31
SYNE2-210ENST00000553455 MBD1Q9UIS9 605 aaPredicted RBP6.89□□□□□ -1.31
SYNE2-210ENST00000553455 PCDHA5Q9Y5H7 936 aa6.89□□□□□ -1.31
SYNE2-210ENST00000553455 PEX10O60683 326 aa6.88□□□□□ -1.31
SYNE2-210ENST00000553455 SNUPNO95149 360 aaKnown RBP6.88□□□□□ -1.31
SYNE2-210ENST00000553455 ZRANB2O95218 330 aaKnown RBP eCLIP6.88□□□□□ -1.31
SYNE2-210ENST00000553455 ENO2P09104 434 aaPredicted RBP6.88□□□□□ -1.31
SYNE2-210ENST00000553455 CCND1P24385 295 aa6.88□□□□□ -1.31
SYNE2-210ENST00000553455 NCKAP1LP55160 1127 aa6.88□□□□□ -1.31
SYNE2-210ENST00000553455 ROM1Q03395 351 aa6.88□□□□□ -1.31
SYNE2-210ENST00000553455 SKIDA1Q1XH10 827 aa6.88□□□□□ -1.31
SYNE2-210ENST00000553455 FAM102BQ5T8I3 360 aa6.88□□□□□ -1.31
SYNE2-210ENST00000553455 NXNQ6DKJ4 435 aa6.88□□□□□ -1.31
SYNE2-210ENST00000553455 MPZL3Q6UWV2 235 aa6.88□□□□□ -1.31
SYNE2-210ENST00000553455 PNMA8AQ86V59 439 aaPredicted RBP6.88□□□□□ -1.31
SYNE2-210ENST00000553455 LDHDQ86WU2 507 aa6.88□□□□□ -1.31
SYNE2-210ENST00000553455 WDR75Q8IWA0 830 aaKnown RBP6.88□□□□□ -1.31
SYNE2-210ENST00000553455 AMOTL1Q8IY63 956 aa6.88□□□□□ -1.31
SYNE2-210ENST00000553455 JADE3Q92613 823 aa6.88□□□□□ -1.31
SYNE2-210ENST00000553455 DDX11Q96FC9 970 aa6.88□□□□□ -1.31
SYNE2-210ENST00000553455 TEKT5Q96M29 485 aa6.88□□□□□ -1.31
SYNE2-210ENST00000553455 MCOLN1Q9GZU1 580 aa6.88□□□□□ -1.31
SYNE2-210ENST00000553455 QRSL1Q9H0R6 528 aaKnown RBP6.88□□□□□ -1.31
SYNE2-210ENST00000553455 KCNK12Q9HB15 430 aa6.88□□□□□ -1.31
SYNE2-210ENST00000553455 ZNF277Q9NRM2 450 aaPredicted RBP6.88□□□□□ -1.31
SYNE2-210ENST00000553455 DNAJC28Q9NX36 388 aa6.88□□□□□ -1.31
SYNE2-210ENST00000553455 GALNT8Q9NY28 637 aa6.88□□□□□ -1.31
SYNE2-210ENST00000553455 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.88□□□□□ -1.31
SYNE2-210ENST00000553455 XPOTO43592 962 aaKnown RBP6.87□□□□□ -1.31
SYNE2-210ENST00000553455 APOL3O95236 402 aa6.87□□□□□ -1.31
SYNE2-210ENST00000553455 LPLP06858 475 aa6.87□□□□□ -1.31
SYNE2-210ENST00000553455 PFKMP08237 780 aa6.87□□□□□ -1.31
SYNE2-210ENST00000553455 JUNBP17275 347 aaPredicted RBP6.87□□□□□ -1.31
SYNE2-210ENST00000553455 AGXTP21549 392 aa6.87□□□□□ -1.31
SYNE2-210ENST00000553455 IGFBP6P24592 240 aaPredicted RBP6.87□□□□□ -1.31
SYNE2-210ENST00000553455 HTRA3P83110 453 aa6.87□□□□□ -1.31
SYNE2-210ENST00000553455 ADCY2Q08462 1091 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms