RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 LEXMQ3ZCV2 418 aa7.87□□□□□ -1.15
PRPF40B-214ENST00000551320 METTL7BQ6UX53 244 aa7.87□□□□□ -1.15
PRPF40B-214ENST00000551320 NFXL1Q6ZNB6 911 aa7.87□□□□□ -1.15
PRPF40B-214ENST00000551320 RALYLQ86SE5 291 aaKnown RBP7.87□□□□□ -1.15
PRPF40B-214ENST00000551320 RPAINQ86UA6 219 aa7.87□□□□□ -1.15
PRPF40B-214ENST00000551320 FAM160A2Q8N612 972 aaPredicted RBP7.87□□□□□ -1.15
PRPF40B-214ENST00000551320 LRRN4Q8WUT4 740 aa7.87□□□□□ -1.15
PRPF40B-214ENST00000551320 ZNF668Q96K58 619 aaPredicted RBP7.87□□□□□ -1.15
PRPF40B-214ENST00000551320 APOL5Q9BWW9 433 aa7.87□□□□□ -1.15
PRPF40B-214ENST00000551320 CDH22Q9UJ99 828 aa7.87□□□□□ -1.15
PRPF40B-214ENST00000551320 CDY2AQ9Y6F7 541 aa7.87□□□□□ -1.15
PRPF40B-214ENST00000551320 ERICH2A1L162 156 aa7.86□□□□□ -1.15
PRPF40B-214ENST00000551320 HIP1O00291 1037 aa7.86□□□□□ -1.15
PRPF40B-214ENST00000551320 PER2O15055 1255 aa7.86□□□□□ -1.15
PRPF40B-214ENST00000551320 SGSM2O43147 1006 aa7.86□□□□□ -1.15
PRPF40B-214ENST00000551320 FIBPO43427 364 aa7.86□□□□□ -1.15
PRPF40B-214ENST00000551320 TBX10O75333 385 aa7.86□□□□□ -1.15
PRPF40B-214ENST00000551320 ARP10275 920 aa7.86□□□□□ -1.15
PRPF40B-214ENST00000551320 INSRRP14616 1297 aa7.86□□□□□ -1.15
PRPF40B-214ENST00000551320 CPA1P15085 419 aa7.86□□□□□ -1.15
PRPF40B-214ENST00000551320 ICAM3P32942 547 aa7.86□□□□□ -1.15
PRPF40B-214ENST00000551320 MGAT3Q09327 533 aa7.86□□□□□ -1.15
PRPF40B-214ENST00000551320 MMRN1Q13201 1228 aa7.86□□□□□ -1.15
PRPF40B-214ENST00000551320 CAMK1Q14012 370 aa7.86□□□□□ -1.15
PRPF40B-214ENST00000551320 GRIK4Q16099 956 aa7.86□□□□□ -1.15
PRPF40B-214ENST00000551320 DESI1Q6ICB0 168 aa7.86□□□□□ -1.15
PRPF40B-214ENST00000551320 HEATR3Q7Z4Q2 680 aa7.86□□□□□ -1.15
PRPF40B-214ENST00000551320 CATIPQ7Z7H3 387 aa7.86□□□□□ -1.15
PRPF40B-214ENST00000551320 FIBCD1Q8N539 461 aa7.86□□□□□ -1.15
PRPF40B-214ENST00000551320 NCOA7Q8NI08 942 aa7.86□□□□□ -1.15
PRPF40B-214ENST00000551320 FEZF2Q8TBJ5 459 aa7.86□□□□□ -1.15
PRPF40B-214ENST00000551320 NEK9Q8TD19 979 aa7.86□□□□□ -1.15
PRPF40B-214ENST00000551320 GLG1Q92896 1179 aa7.86□□□□□ -1.15
PRPF40B-214ENST00000551320 RRP36Q96EU6 259 aaKnown RBP7.86□□□□□ -1.15
PRPF40B-214ENST00000551320 IL17RAQ96F46 866 aa7.86□□□□□ -1.15
PRPF40B-214ENST00000551320 USP26Q9BXU7 913 aa7.86□□□□□ -1.15
PRPF40B-214ENST00000551320 PRDM9Q9NQV7 894 aa7.86□□□□□ -1.15
PRPF40B-214ENST00000551320 MUTYHQ9UIF7 546 aa7.86□□□□□ -1.15
PRPF40B-214ENST00000551320 GINS2Q9Y248 185 aa7.86□□□□□ -1.15
PRPF40B-214ENST00000551320 MRPL42Q9Y6G3 142 aaKnown RBP7.86□□□□□ -1.15
PRPF40B-214ENST00000551320 COL4A6Q14031 1691 aa7.86□□□□□ -1.15
PRPF40B-214ENST00000551320 NLRC5Q86WI3 1866 aa7.85□□□□□ -1.15
PRPF40B-214ENST00000551320 ZFHX2Q9C0A1 2572 aaPredicted RBP7.85□□□□□ -1.15
PRPF40B-214ENST00000551320 FRMPD4Q14CM0 1322 aa7.85□□□□□ -1.15
PRPF40B-214ENST00000551320 EMSYQ7Z589 1322 aa7.85□□□□□ -1.15
PRPF40B-214ENST00000551320 SH2B2O14492 632 aaPredicted RBP7.85□□□□□ -1.15
PRPF40B-214ENST00000551320 MGEA5O60502 916 aa7.85□□□□□ -1.15
PRPF40B-214ENST00000551320 GPR37L1O60883 481 aa7.85□□□□□ -1.15
PRPF40B-214ENST00000551320 ADH1BP00325 375 aa7.85□□□□□ -1.15
PRPF40B-214ENST00000551320 TGFB3P10600 412 aa7.85□□□□□ -1.15
PRPF40B-214ENST00000551320 JUNDP17535 347 aa7.85□□□□□ -1.15
PRPF40B-214ENST00000551320 BMPR1AP36894 532 aa7.85□□□□□ -1.15
PRPF40B-214ENST00000551320 PBX3P40426 434 aa7.85□□□□□ -1.15
PRPF40B-214ENST00000551320 ZP2Q05996 745 aa7.85□□□□□ -1.15
PRPF40B-214ENST00000551320 BTG3Q14201 252 aaPredicted RBP7.85□□□□□ -1.15
PRPF40B-214ENST00000551320 NEDD9Q14511 834 aa7.85□□□□□ -1.15
PRPF40B-214ENST00000551320 GNPTABQ3T906 1256 aa7.85□□□□□ -1.15
PRPF40B-214ENST00000551320 MSS51Q4VC12 460 aa7.85□□□□□ -1.15
PRPF40B-214ENST00000551320 FBXO47Q5MNV8 452 aa7.85□□□□□ -1.15
PRPF40B-214ENST00000551320 PCNX4Q63HM2 1172 aa7.85□□□□□ -1.15
PRPF40B-214ENST00000551320 HFE2Q6ZVN8 426 aa7.85□□□□□ -1.15
PRPF40B-214ENST00000551320 MICU3Q86XE3 530 aa7.85□□□□□ -1.15
PRPF40B-214ENST00000551320 GJA10Q969M2 543 aa7.85□□□□□ -1.15
PRPF40B-214ENST00000551320 POM121Q96HA1 1249 aa7.85□□□□□ -1.15
PRPF40B-214ENST00000551320 ZMYND15Q9H091 742 aa7.85□□□□□ -1.15
PRPF40B-214ENST00000551320 TMX1Q9H3N1 280 aa7.85□□□□□ -1.15
PRPF40B-214ENST00000551320 PSTPIP2Q9H939 334 aa7.85□□□□□ -1.15
PRPF40B-214ENST00000551320 EHMT1Q9H9B1 1298 aa7.85□□□□□ -1.15
PRPF40B-214ENST00000551320 TUBE1Q9UJT0 475 aa7.85□□□□□ -1.15
PRPF40B-214ENST00000551320 BARX2Q9UMQ3 279 aaPredicted RBP7.85□□□□□ -1.15
PRPF40B-214ENST00000551320 PCDHA6Q9UN73 950 aa7.85□□□□□ -1.15
PRPF40B-214ENST00000551320 HCN4Q9Y3Q4 1203 aa7.85□□□□□ -1.15
PRPF40B-214ENST00000551320 PCDHA8Q9Y5H6 950 aa7.85□□□□□ -1.15
PRPF40B-214ENST00000551320 USP34Q70CQ2 3546 aa7.85□□□□□ -1.15
PRPF40B-214ENST00000551320 LOXHD1Q8IVV2 1947 aa7.84□□□□□ -1.15
PRPF40B-214ENST00000551320 SLC27A2O14975 620 aa7.84□□□□□ -1.15
PRPF40B-214ENST00000551320 ITGB1P05556 798 aa7.84□□□□□ -1.15
PRPF40B-214ENST00000551320 MRPS6P82932 125 aaKnown RBP7.84□□□□□ -1.15
PRPF40B-214ENST00000551320 APOBRQ0VD83 1088 aa7.84□□□□□ -1.15
PRPF40B-214ENST00000551320 ITGB3BPQ13352 177 aaPredicted RBP7.84□□□□□ -1.15
PRPF40B-214ENST00000551320 PLCB4Q15147 1175 aa7.84□□□□□ -1.15
PRPF40B-214ENST00000551320 FAM26DQ5JW98 314 aa7.84□□□□□ -1.15
PRPF40B-214ENST00000551320 FAM102BQ5T8I3 360 aa7.84□□□□□ -1.15
PRPF40B-214ENST00000551320 WWC2Q6AWC2 1192 aa7.84□□□□□ -1.15
PRPF40B-214ENST00000551320 KCNV1Q6PIU1 500 aa7.84□□□□□ -1.15
PRPF40B-214ENST00000551320 KLHL23Q8NBE8 558 aa7.84□□□□□ -1.15
PRPF40B-214ENST00000551320 CTCFLQ8NI51 663 aaPredicted RBP7.84□□□□□ -1.15
PRPF40B-214ENST00000551320 TMEM40Q8WWA1 233 aa7.84□□□□□ -1.15
PRPF40B-214ENST00000551320 MAP4K1Q92918 833 aa7.84□□□□□ -1.15
PRPF40B-214ENST00000551320 CUL5Q93034 780 aa7.84□□□□□ -1.15
PRPF40B-214ENST00000551320 PABPC5Q96DU9 382 aaKnown RBP7.84□□□□□ -1.15
PRPF40B-214ENST00000551320 LSG1Q9H089 658 aaKnown RBP7.84□□□□□ -1.15
PRPF40B-214ENST00000551320 NSUN3Q9H649 340 aaKnown RBP7.84□□□□□ -1.15
PRPF40B-214ENST00000551320 LMCD1Q9NZU5 365 aa7.84□□□□□ -1.15
PRPF40B-214ENST00000551320 BRPF3Q9ULD4 1205 aa7.84□□□□□ -1.15
PRPF40B-214ENST00000551320 UBIAD1Q9Y5Z9 338 aa7.84□□□□□ -1.15
PRPF40B-214ENST00000551320 CFAP54Q96N23 3096 aa7.84□□□□□ -1.15
PRPF40B-214ENST00000551320 ADGRA3Q8IWK6 1321 aa7.83□□□□□ -1.16
PRPF40B-214ENST00000551320 KAT6AQ92794 2004 aa7.83□□□□□ -1.16
PRPF40B-214ENST00000551320 ZDBF2Q9HCK1 2354 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms