RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 KCNQ2O43526 872 aa14.05□□□□□ -0.16
MSH6-210ENST00000540021 CAND2O75155 1236 aa14.05□□□□□ -0.16
MSH6-210ENST00000540021 NR3C1P04150 777 aa14.05□□□□□ -0.16
MSH6-210ENST00000540021 HOXA13P31271 388 aaPredicted RBP14.05□□□□□ -0.16
MSH6-210ENST00000540021 USP11P51784 963 aa14.05□□□□□ -0.16
MSH6-210ENST00000540021 CYP4F22Q6NT55 531 aa14.05□□□□□ -0.16
MSH6-210ENST00000540021 EP400NLQ6ZTU2 488 aa14.05□□□□□ -0.16
MSH6-210ENST00000540021 CNBD1Q8NA66 436 aa14.05□□□□□ -0.16
MSH6-210ENST00000540021 RUBCNQ92622 972 aa14.05□□□□□ -0.16
MSH6-210ENST00000540021 CCDC127Q96BQ5 260 aa14.05□□□□□ -0.16
MSH6-210ENST00000540021 SGSM3Q96HU1 749 aa14.05□□□□□ -0.16
MSH6-210ENST00000540021 CEP63Q96MT8 703 aa14.05□□□□□ -0.16
MSH6-210ENST00000540021 XPO6Q96QU8 1125 aaKnown RBP14.05□□□□□ -0.16
MSH6-210ENST00000540021 TRIM7Q9C029 511 aa14.05□□□□□ -0.16
MSH6-210ENST00000540021 METTL14Q9HCE5 456 aaKnown RBP14.05□□□□□ -0.16
MSH6-210ENST00000540021 OSGEPQ9NPF4 335 aa14.05□□□□□ -0.16
MSH6-210ENST00000540021 BLOC1S4Q9NUP1 217 aa14.05□□□□□ -0.16
MSH6-210ENST00000540021 GRIN2DO15399 1336 aa14.04□□□□□ -0.16
MSH6-210ENST00000540021 SUN1O94901 812 aa14.04□□□□□ -0.16
MSH6-210ENST00000540021 CTNNA2P26232 953 aa14.04□□□□□ -0.16
MSH6-210ENST00000540021 SCTRP47872 440 aa14.04□□□□□ -0.16
MSH6-210ENST00000540021 ZBTB16Q05516 673 aa14.04□□□□□ -0.16
MSH6-210ENST00000540021 ZNF844Q08AG5 666 aa14.04□□□□□ -0.16
MSH6-210ENST00000540021 CTTNQ14247 550 aaKnown RBP14.04□□□□□ -0.16
MSH6-210ENST00000540021 ZNF365Q70YC5 407 aa14.04□□□□□ -0.16
MSH6-210ENST00000540021 ZNF571Q7Z3V5 609 aaPredicted RBP14.04□□□□□ -0.16
MSH6-210ENST00000540021 CNPY4Q8N129 248 aa14.04□□□□□ -0.16
MSH6-210ENST00000540021 ADAM33Q9BZ11 813 aa14.04□□□□□ -0.16
MSH6-210ENST00000540021 TTYH3Q9C0H2 523 aa14.04□□□□□ -0.16
MSH6-210ENST00000540021 KLHL14Q9P2G3 628 aa14.04□□□□□ -0.16
MSH6-210ENST00000540021 NAGPAQ9UK23 515 aa14.04□□□□□ -0.16
MSH6-210ENST00000540021 RABGAP1Q9Y3P9 1069 aa14.04□□□□□ -0.16
MSH6-210ENST00000540021 KRT15P19012 456 aa14.04□□□□□ -0.16
MSH6-210ENST00000540021 ADCY8P40145 1251 aa14.04□□□□□ -0.16
MSH6-210ENST00000540021 SMTNP53814 917 aa14.04□□□□□ -0.16
MSH6-210ENST00000540021 CCDC174Q6PII3 467 aa14.04□□□□□ -0.16
MSH6-210ENST00000540021 IQCKQ8N0W5 287 aa14.04□□□□□ -0.16
MSH6-210ENST00000540021 SPICE1Q8N0Z3 855 aa14.04□□□□□ -0.16
MSH6-210ENST00000540021 PNMA5Q96PV4 448 aa14.04□□□□□ -0.16
MSH6-210ENST00000540021 GGA1Q9UJY5 639 aa14.04□□□□□ -0.16
MSH6-210ENST00000540021 ATRNO75882 1429 aa14.04□□□□□ -0.16
MSH6-210ENST00000540021 LMNB1P20700 586 aa14.04□□□□□ -0.16
MSH6-210ENST00000540021 ZNF131P52739 623 aa14.04□□□□□ -0.16
MSH6-210ENST00000540021 UAP1Q16222 522 aaPredicted RBP14.04□□□□□ -0.16
MSH6-210ENST00000540021 LRCH2Q5VUJ6 765 aa14.04□□□□□ -0.16
MSH6-210ENST00000540021 ARMC9Q7Z3E5 817 aa14.04□□□□□ -0.16
MSH6-210ENST00000540021 BAP1Q92560 729 aa14.04□□□□□ -0.16
MSH6-210ENST00000540021 ZKSCAN4Q969J2 545 aaPredicted RBP14.04□□□□□ -0.16
MSH6-210ENST00000540021 EDEM3Q9BZQ6 932 aa14.04□□□□□ -0.16
MSH6-210ENST00000540021 GDF3Q9NR23 364 aa14.04□□□□□ -0.16
MSH6-210ENST00000540021 USP40Q9NVE5 1235 aa14.04□□□□□ -0.16
MSH6-210ENST00000540021 RASSF10A6NK89 507 aa14.03□□□□□ -0.16
MSH6-210ENST00000540021 KCNJ1P48048 391 aa14.03□□□□□ -0.16
MSH6-210ENST00000540021 KCNMA1Q12791 1236 aa14.03□□□□□ -0.16
MSH6-210ENST00000540021 DRAP1Q14919 205 aaPredicted RBP14.03□□□□□ -0.16
MSH6-210ENST00000540021 ODR4Q5SWX8 454 aa14.03□□□□□ -0.16
MSH6-210ENST00000540021 FMNL3Q8IVF7 1028 aa14.03□□□□□ -0.16
MSH6-210ENST00000540021 UBE2TQ9NPD8 197 aaPredicted RBP14.03□□□□□ -0.16
MSH6-210ENST00000540021 THRAP3Q9Y2W1 955 aaKnown RBP14.03□□□□□ -0.16
MSH6-210ENST00000540021 H0Y3Z8 333 aa14.03□□□□□ -0.16
MSH6-210ENST00000540021 MYBP10242 640 aa14.03□□□□□ -0.16
MSH6-210ENST00000540021 BCRP11274 1271 aa14.03□□□□□ -0.16
MSH6-210ENST00000540021 CDC25CP30307 473 aa14.03□□□□□ -0.16
MSH6-210ENST00000540021 FLT3P36888 993 aa14.03□□□□□ -0.16
MSH6-210ENST00000540021 EIF3BP55884 814 aaKnown RBP14.03□□□□□ -0.16
MSH6-210ENST00000540021 SLC29A2Q14542 456 aa14.03□□□□□ -0.16
MSH6-210ENST00000540021 QPCTQ16769 361 aa14.03□□□□□ -0.16
MSH6-210ENST00000540021 PRPF38AQ8NAV1 312 aaKnown RBP14.03□□□□□ -0.16
MSH6-210ENST00000540021 SLC35G2Q8TBE7 412 aa14.03□□□□□ -0.16
MSH6-210ENST00000540021 LEMD3Q9Y2U8 911 aa14.03□□□□□ -0.16
MSH6-210ENST00000540021 CETN2P41208 172 aa14.03□□□□□ -0.16
MSH6-210ENST00000540021 KNOP1Q1ED39 458 aaKnown RBP14.03□□□□□ -0.16
MSH6-210ENST00000540021 C10orf76Q5T2E6 689 aa14.03□□□□□ -0.16
MSH6-210ENST00000540021 ARHGEF2Q92974 986 aaKnown RBP14.03□□□□□ -0.16
MSH6-210ENST00000540021 SPZ1Q9BXG8 430 aa14.03□□□□□ -0.16
MSH6-210ENST00000540021 ZC3H12CQ9C0D7 883 aaKnown RBP14.03□□□□□ -0.16
MSH6-210ENST00000540021 LAMA4Q16363 1823 aa14.03□□□□□ -0.16
MSH6-210ENST00000540021 ARHGEF35A5YM69 484 aa14.02□□□□□ -0.16
MSH6-210ENST00000540021 MYL7Q01449 175 aa14.02□□□□□ -0.16
MSH6-210ENST00000540021 ITGB3BPQ13352 177 aaPredicted RBP14.02□□□□□ -0.16
MSH6-210ENST00000540021 ITPK1Q13572 414 aa14.02□□□□□ -0.16
MSH6-210ENST00000540021 SBK1Q52WX2 424 aa14.02□□□□□ -0.16
MSH6-210ENST00000540021 ASPRV1Q53RT3 343 aa14.02□□□□□ -0.16
MSH6-210ENST00000540021 ZNF449Q6P9G9 518 aa14.02□□□□□ -0.16
MSH6-210ENST00000540021 KCNV1Q6PIU1 500 aa14.02□□□□□ -0.16
MSH6-210ENST00000540021 LRRC34Q8IZ02 419 aa14.02□□□□□ -0.16
MSH6-210ENST00000540021 ADGRF4Q8IZF3 695 aa14.02□□□□□ -0.16
MSH6-210ENST00000540021 HOOK2Q96ED9 719 aa14.02□□□□□ -0.16
MSH6-210ENST00000540021 TRIM6Q9C030 488 aaPredicted RBP14.02□□□□□ -0.16
MSH6-210ENST00000540021 CRYBG1Q9Y4K1 1723 aa14.02□□□□□ -0.16
MSH6-210ENST00000540021 PALM3A6NDB9 673 aaPredicted RBP14.02□□□□□ -0.17
MSH6-210ENST00000540021 DCDC2CA8MYV0 355 aa14.02□□□□□ -0.17
MSH6-210ENST00000540021 HIP1RO75146 1068 aa14.02□□□□□ -0.17
MSH6-210ENST00000540021 AKR1B1P15121 316 aa14.02□□□□□ -0.17
MSH6-210ENST00000540021 CASP4P49662 377 aa14.02□□□□□ -0.17
MSH6-210ENST00000540021 ITIH3Q06033 890 aa14.02□□□□□ -0.17
MSH6-210ENST00000540021 POC1B-GALNT4F8VUJ3 575 aa14.02□□□□□ -0.17
MSH6-210ENST00000540021 EVI5O60447 810 aa14.02□□□□□ -0.17
MSH6-210ENST00000540021 PSMC2P35998 433 aaKnown RBP14.02□□□□□ -0.17
MSH6-210ENST00000540021 CACNB3P54284 484 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms