RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 CCDC114Q96M63 670 aa19.61■□□□□ 0.73
RAB40C-203ENST00000535977 MMP10P09238 476 aa19.6■□□□□ 0.73
RAB40C-203ENST00000535977 EZH2Q15910 746 aaKnown RBP19.6■□□□□ 0.73
RAB40C-203ENST00000535977 SIAH1Q8IUQ4 282 aa19.6■□□□□ 0.73
RAB40C-203ENST00000535977 MMGT1Q8N4V1 131 aa19.6■□□□□ 0.73
RAB40C-203ENST00000535977 SCFD1Q8WVM8 642 aa19.6■□□□□ 0.73
RAB40C-203ENST00000535977 RUFY1Q96T51 708 aa19.6■□□□□ 0.73
RAB40C-203ENST00000535977 ADAM9Q13443 819 aa19.6■□□□□ 0.73
RAB40C-203ENST00000535977 HDAC7Q8WUI4 952 aa19.6■□□□□ 0.73
RAB40C-203ENST00000535977 CALR3Q96L12 384 aaKnown RBP19.6■□□□□ 0.73
RAB40C-203ENST00000535977 RNF14Q9UBS8 474 aa19.6■□□□□ 0.73
RAB40C-203ENST00000535977 TPX2Q9ULW0 747 aaKnown RBP19.6■□□□□ 0.73
RAB40C-203ENST00000535977 HYOU1Q9Y4L1 999 aa19.6■□□□□ 0.73
RAB40C-203ENST00000535977 COL2A1P02458 1487 aaPredicted RBP19.6■□□□□ 0.73
RAB40C-203ENST00000535977 EME2A4GXA9 379 aaPredicted RBP19.6■□□□□ 0.73
RAB40C-203ENST00000535977 MED24O75448 989 aa19.6■□□□□ 0.73
RAB40C-203ENST00000535977 SEC24CP53992 1094 aa19.6■□□□□ 0.73
RAB40C-203ENST00000535977 SPIRE1Q08AE8 756 aa19.6■□□□□ 0.73
RAB40C-203ENST00000535977 FAM83BQ5T0W9 1011 aa19.6■□□□□ 0.73
RAB40C-203ENST00000535977 FUKQ8N0W3 1084 aa19.6■□□□□ 0.73
RAB40C-203ENST00000535977 UPF1Q92900 1129 aaKnown RBP eCLIP19.6■□□□□ 0.732e-7■■■■■ 32.6
RAB40C-203ENST00000535977 NOX5Q96PH1 765 aa19.6■□□□□ 0.73
RAB40C-203ENST00000535977 ATP6V0A4Q9HBG4 840 aa19.6■□□□□ 0.73
RAB40C-203ENST00000535977 TRAF3IP3Q9Y228 551 aa19.6■□□□□ 0.73
RAB40C-203ENST00000535977 SIPA1L1O43166 1804 aa19.59■□□□□ 0.73
RAB40C-203ENST00000535977 ATRNL1Q5VV63 1379 aa19.59■□□□□ 0.73
RAB40C-203ENST00000535977 ADAMTSL1Q8N6G6 1762 aa19.59■□□□□ 0.73
RAB40C-203ENST00000535977 CYP3A4P08684 503 aa19.59■□□□□ 0.73
RAB40C-203ENST00000535977 RPSAP08865 295 aaKnown RBP19.59■□□□□ 0.73
RAB40C-203ENST00000535977 PRR16Q569H4 304 aa19.59■□□□□ 0.73
RAB40C-203ENST00000535977 RBM26Q5T8P6 1007 aaKnown RBP19.59■□□□□ 0.73
RAB40C-203ENST00000535977 SH3BP5LQ7L8J4 393 aa19.59■□□□□ 0.73
RAB40C-203ENST00000535977 FRMD5Q7Z6J6 570 aa19.59■□□□□ 0.73
RAB40C-203ENST00000535977 CATSPER3Q86XQ3 398 aa19.59■□□□□ 0.73
RAB40C-203ENST00000535977 GJA10Q969M2 543 aa19.59■□□□□ 0.73
RAB40C-203ENST00000535977 CCT8L2Q96SF2 557 aa19.59■□□□□ 0.73
RAB40C-203ENST00000535977 PPP1R12BO60237 982 aaPredicted RBP19.59■□□□□ 0.73
RAB40C-203ENST00000535977 ECE2O60344 883 aa19.59■□□□□ 0.73
RAB40C-203ENST00000535977 BMP3P12645 472 aa19.59■□□□□ 0.73
RAB40C-203ENST00000535977 EPS15P42566 896 aa19.59■□□□□ 0.73
RAB40C-203ENST00000535977 NNTQ13423 1086 aa19.59■□□□□ 0.73
RAB40C-203ENST00000535977 PTGISQ16647 500 aa19.59■□□□□ 0.73
RAB40C-203ENST00000535977 ARSHQ5FYA8 562 aa19.59■□□□□ 0.73
RAB40C-203ENST00000535977 HGSNATQ68CP4 663 aa19.59■□□□□ 0.73
RAB40C-203ENST00000535977 AIPL1Q9NZN9 384 aa19.59■□□□□ 0.73
RAB40C-203ENST00000535977 HSF2BPO75031 334 aa19.58■□□□□ 0.73
RAB40C-203ENST00000535977 NDUFB10O96000 172 aa19.58■□□□□ 0.73
RAB40C-203ENST00000535977 MRPS25P82663 173 aaKnown RBP19.58■□□□□ 0.73
RAB40C-203ENST00000535977 NLRP14Q86W24 1093 aa19.58■□□□□ 0.73
RAB40C-203ENST00000535977 CREG2Q8IUH2 290 aa19.58■□□□□ 0.73
RAB40C-203ENST00000535977 ARMC2Q8NEN0 867 aa19.58■□□□□ 0.73
RAB40C-203ENST00000535977 MYCBPAPQ8TBZ2 947 aa19.58■□□□□ 0.73
RAB40C-203ENST00000535977 MAGEC3Q8TD91 643 aa19.58■□□□□ 0.73
RAB40C-203ENST00000535977 POLR3CQ9BUI4 534 aaPredicted RBP19.58■□□□□ 0.73
RAB40C-203ENST00000535977 LSM14BQ9BX40 385 aaKnown RBP19.58■□□□□ 0.73
RAB40C-203ENST00000535977 DMGDHQ9UI17 866 aaKnown RBP19.58■□□□□ 0.73
RAB40C-203ENST00000535977 H0YIN7 160 aa19.58■□□□□ 0.72
RAB40C-203ENST00000535977 PIK3CDO00329 1044 aa19.58■□□□□ 0.72
RAB40C-203ENST00000535977 CALUO43852 315 aaPredicted RBP19.58■□□□□ 0.72
RAB40C-203ENST00000535977 NOL4O94818 638 aa19.58■□□□□ 0.72
RAB40C-203ENST00000535977 GCKP35557 465 aa19.58■□□□□ 0.72
RAB40C-203ENST00000535977 APBA1Q02410 837 aa19.58■□□□□ 0.72
RAB40C-203ENST00000535977 IKQ13123 557 aaPredicted RBP19.58■□□□□ 0.72
RAB40C-203ENST00000535977 GIT2Q14161 759 aa19.58■□□□□ 0.72
RAB40C-203ENST00000535977 TDRD12Q587J7 1177 aaKnown RBP19.58■□□□□ 0.72
RAB40C-203ENST00000535977 ALS2CLQ60I27 953 aa19.58■□□□□ 0.72
RAB40C-203ENST00000535977 NELFCDQ8IXH7 590 aa19.58■□□□□ 0.72
RAB40C-203ENST00000535977 SMCR8Q8TEV9 937 aaPredicted RBP19.58■□□□□ 0.72
RAB40C-203ENST00000535977 TBC1D7Q9P0N9 293 aa19.58■□□□□ 0.72
RAB40C-203ENST00000535977 GBP2P32456 591 aaPredicted RBP19.57■□□□□ 0.72
RAB40C-203ENST00000535977 PAFAH1B1P43034 410 aa19.57■□□□□ 0.72
RAB40C-203ENST00000535977 KNOP1Q1ED39 458 aaKnown RBP19.57■□□□□ 0.72
RAB40C-203ENST00000535977 C10orf76Q5T2E6 689 aa19.57■□□□□ 0.72
RAB40C-203ENST00000535977 C6orf89Q6UWU4 347 aa19.57■□□□□ 0.72
RAB40C-203ENST00000535977 KDM7AQ6ZMT4 941 aa19.57■□□□□ 0.72
RAB40C-203ENST00000535977 CCDC50Q8IVM0 306 aa19.57■□□□□ 0.72
RAB40C-203ENST00000535977 HAUS2Q9NVX0 235 aa19.57■□□□□ 0.72
RAB40C-203ENST00000535977 CAPN6Q9Y6Q1 641 aa19.57■□□□□ 0.72
RAB40C-203ENST00000535977 ATAD5Q96QE3 1844 aa19.57■□□□□ 0.72
RAB40C-203ENST00000535977 PDXKO00764 312 aa19.57■□□□□ 0.72
RAB40C-203ENST00000535977 PPP1R37O75864 691 aa19.57■□□□□ 0.72
RAB40C-203ENST00000535977 MOCS3O95396 460 aa19.57■□□□□ 0.72
RAB40C-203ENST00000535977 CACNB3P54284 484 aa19.57■□□□□ 0.72
RAB40C-203ENST00000535977 DRP2Q13474 957 aa19.57■□□□□ 0.72
RAB40C-203ENST00000535977 OSBPL9Q96SU4 736 aa19.57■□□□□ 0.72
RAB40C-203ENST00000535977 KCNQ5Q9NR82 932 aa19.57■□□□□ 0.72
RAB40C-203ENST00000535977 COL11A2P13942 1736 aaPredicted RBP19.56■□□□□ 0.72
RAB40C-203ENST00000535977 GOLGA6L7A0A1B0GV03 622 aa19.56■□□□□ 0.72
RAB40C-203ENST00000535977 KRT14P02533 472 aa19.56■□□□□ 0.72
RAB40C-203ENST00000535977 RPL13P26373 211 aaKnown RBP19.56■□□□□ 0.72
RAB40C-203ENST00000535977 POLR2FP61218 127 aaKnown RBP19.56■□□□□ 0.72
RAB40C-203ENST00000535977 SPRED3Q2MJR0 410 aa19.56■□□□□ 0.72
RAB40C-203ENST00000535977 ZIM3Q96PE6 472 aa19.56■□□□□ 0.72
RAB40C-203ENST00000535977 LRRC1Q9BTT6 524 aa19.56■□□□□ 0.72
RAB40C-203ENST00000535977 MLXIPQ9HAP2 919 aa19.56■□□□□ 0.72
RAB40C-203ENST00000535977 METTL14Q9HCE5 456 aaKnown RBP19.56■□□□□ 0.72
RAB40C-203ENST00000535977 PLCB1Q9NQ66 1216 aa19.56■□□□□ 0.72
RAB40C-203ENST00000535977 BZW2Q9Y6E2 419 aaKnown RBP19.56■□□□□ 0.72
RAB40C-203ENST00000535977 GOLGB1Q14789 3259 aaKnown RBP19.56■□□□□ 0.72
RAB40C-203ENST00000535977 POTEFA5A3E0 1075 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 542.2 ms