RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 KCNMA1Q12791 1236 aa12.66□□□□□ -0.38
USP35-207ENST00000530546 ENOX2Q16206 610 aaKnown RBP12.66□□□□□ -0.38
USP35-207ENST00000530546 CEP55Q53EZ4 464 aa12.66□□□□□ -0.38
USP35-207ENST00000530546 LSM14BQ9BX40 385 aaKnown RBP12.66□□□□□ -0.38
USP35-207ENST00000530546 HDAC6Q9UBN7 1215 aa12.66□□□□□ -0.38
USP35-207ENST00000530546 PGAP2Q9UHJ9 254 aa12.66□□□□□ -0.38
USP35-207ENST00000530546 PITPNM2Q9BZ72 1349 aa12.66□□□□□ -0.38
USP35-207ENST00000530546 ZC3H4Q9UPT8 1303 aaKnown RBP12.66□□□□□ -0.38
USP35-207ENST00000530546 A0A1W2PQJ5 194 aa12.66□□□□□ -0.38
USP35-207ENST00000530546 TARSL2A2RTX5 802 aaKnown RBP12.66□□□□□ -0.38
USP35-207ENST00000530546 NFIBO00712 420 aa12.66□□□□□ -0.38
USP35-207ENST00000530546 CETN3O15182 167 aa12.66□□□□□ -0.38
USP35-207ENST00000530546 FSBPO95073 299 aa12.66□□□□□ -0.38
USP35-207ENST00000530546 POLD1P28340 1107 aa12.66□□□□□ -0.38
USP35-207ENST00000530546 EIF4A3P38919 411 aaKnown RBP12.66□□□□□ -0.38
USP35-207ENST00000530546 EPS15P42566 896 aa12.66□□□□□ -0.38
USP35-207ENST00000530546 PRAMEF18Q5VWM3 479 aa12.66□□□□□ -0.38
USP35-207ENST00000530546 B4GALNT4Q76KP1 1039 aa12.66□□□□□ -0.38
USP35-207ENST00000530546 TRMT1LQ7Z2T5 733 aaKnown RBP12.66□□□□□ -0.38
USP35-207ENST00000530546 ZBED3Q96IU2 234 aaPredicted RBP12.66□□□□□ -0.38
USP35-207ENST00000530546 IKZF4Q9H2S9 585 aa12.66□□□□□ -0.38
USP35-207ENST00000530546 HAUS4Q9H6D7 363 aa12.66□□□□□ -0.38
USP35-207ENST00000530546 RAVER2Q9HCJ3 691 aaKnown RBP12.66□□□□□ -0.38
USP35-207ENST00000530546 ARHGAP20Q9P2F6 1191 aa12.66□□□□□ -0.38
USP35-207ENST00000530546 UTRNP46939 3433 aa12.66□□□□□ -0.38
USP35-207ENST00000530546 NFKBIEO00221 500 aa12.66□□□□□ -0.38
USP35-207ENST00000530546 KIF3CO14782 793 aa12.66□□□□□ -0.38
USP35-207ENST00000530546 SLITRK3O94933 977 aa12.66□□□□□ -0.38
USP35-207ENST00000530546 EYA4O95677 639 aa12.66□□□□□ -0.38
USP35-207ENST00000530546 KCNA1Q09470 495 aa12.66□□□□□ -0.38
USP35-207ENST00000530546 SPA17Q15506 151 aa12.66□□□□□ -0.38
USP35-207ENST00000530546 FIGNQ5HY92 759 aa12.66□□□□□ -0.38
USP35-207ENST00000530546 CEP63Q96MT8 703 aa12.66□□□□□ -0.38
USP35-207ENST00000530546 POLR3CQ9BUI4 534 aaPredicted RBP12.66□□□□□ -0.38
USP35-207ENST00000530546 EHMT1Q9H9B1 1298 aa12.66□□□□□ -0.38
USP35-207ENST00000530546 FZD1Q9UP38 647 aa12.66□□□□□ -0.38
USP35-207ENST00000530546 FRMD3A2A2Y4 597 aa12.65□□□□□ -0.38
USP35-207ENST00000530546 CHUKO15111 745 aa12.65□□□□□ -0.38
USP35-207ENST00000530546 CLIC2O15247 247 aa12.65□□□□□ -0.38
USP35-207ENST00000530546 EIF3HO15372 352 aaKnown RBP eCLIP12.65□□□□□ -0.38
USP35-207ENST00000530546 SLC26A4O43511 780 aa12.65□□□□□ -0.38
USP35-207ENST00000530546 AKR1B10O60218 316 aa12.65□□□□□ -0.38
USP35-207ENST00000530546 PSMD10O75832 226 aa12.65□□□□□ -0.38
USP35-207ENST00000530546 RDXP35241 583 aaKnown RBP12.65□□□□□ -0.38
USP35-207ENST00000530546 RASSF7Q02833 373 aa12.65□□□□□ -0.38
USP35-207ENST00000530546 ARID5AQ03989 594 aa12.65□□□□□ -0.38
USP35-207ENST00000530546 TNIP1Q15025 636 aa12.65□□□□□ -0.38
USP35-207ENST00000530546 RINT1Q6NUQ1 792 aa12.65□□□□□ -0.38
USP35-207ENST00000530546 MICALL2Q8IY33 904 aa12.65□□□□□ -0.38
USP35-207ENST00000530546 JPH2Q9BR39 696 aaPredicted RBP12.65□□□□□ -0.38
USP35-207ENST00000530546 UNC45AQ9H3U1 944 aa12.65□□□□□ -0.38
USP35-207ENST00000530546 GOLGA6CA6NDK9 693 aa12.65□□□□□ -0.38
USP35-207ENST00000530546 PHF20L1A8MW92 1017 aa12.65□□□□□ -0.38
USP35-207ENST00000530546 ZNF263O14978 683 aa12.65□□□□□ -0.38
USP35-207ENST00000530546 FAM13AO94988 1023 aa12.65□□□□□ -0.38
USP35-207ENST00000530546 GOLGA6DP0CG33 693 aa12.65□□□□□ -0.38
USP35-207ENST00000530546 ELF1P32519 619 aa12.65□□□□□ -0.38
USP35-207ENST00000530546 GMPSP49915 693 aaPredicted RBP12.65□□□□□ -0.38
USP35-207ENST00000530546 PRELPP51888 382 aa12.65□□□□□ -0.38
USP35-207ENST00000530546 USP14P54578 494 aa12.65□□□□□ -0.38
USP35-207ENST00000530546 POLR2FP61218 127 aaKnown RBP12.65□□□□□ -0.38
USP35-207ENST00000530546 TDRD12Q587J7 1177 aaKnown RBP12.65□□□□□ -0.38
USP35-207ENST00000530546 EGFL6Q8IUX8 553 aa12.65□□□□□ -0.38
USP35-207ENST00000530546 KSR1Q8IVT5 923 aa12.65□□□□□ -0.38
USP35-207ENST00000530546 CCDC170Q8IYT3 715 aa12.65□□□□□ -0.38
USP35-207ENST00000530546 MYCT1Q8N699 235 aa12.65□□□□□ -0.38
USP35-207ENST00000530546 BCAS4Q8TDM0 211 aa12.65□□□□□ -0.38
USP35-207ENST00000530546 HSD17B14Q9BPX1 270 aa12.65□□□□□ -0.38
USP35-207ENST00000530546 CAPS2Q9BXY5 557 aa12.65□□□□□ -0.38
USP35-207ENST00000530546 VPS33BQ9H267 617 aa12.65□□□□□ -0.38
USP35-207ENST00000530546 GOLGA6AQ9NYA3 693 aa12.65□□□□□ -0.38
USP35-207ENST00000530546 COL20A1Q9P218 1284 aa12.65□□□□□ -0.38
USP35-207ENST00000530546 MCM8Q9UJA3 840 aa12.65□□□□□ -0.38
USP35-207ENST00000530546 PLAGL2Q9UPG8 496 aa12.65□□□□□ -0.38
USP35-207ENST00000530546 KRT86O43790 486 aa12.64□□□□□ -0.39
USP35-207ENST00000530546 FLOT1O75955 427 aa12.64□□□□□ -0.39
USP35-207ENST00000530546 NMT1P30419 496 aaKnown RBP12.64□□□□□ -0.39
USP35-207ENST00000530546 HOXD13P35453 343 aa12.64□□□□□ -0.39
USP35-207ENST00000530546 PTGER2P43116 358 aa12.64□□□□□ -0.39
USP35-207ENST00000530546 TGFB2P61812 414 aa12.64□□□□□ -0.39
USP35-207ENST00000530546 KNOP1Q1ED39 458 aaKnown RBP12.64□□□□□ -0.39
USP35-207ENST00000530546 MAEAQ7L5Y9 396 aa12.64□□□□□ -0.39
USP35-207ENST00000530546 NOA1Q8NC60 698 aaKnown RBP12.64□□□□□ -0.39
USP35-207ENST00000530546 IL31RAQ8NI17 732 aa12.64□□□□□ -0.39
USP35-207ENST00000530546 SLC5A5Q92911 643 aa12.64□□□□□ -0.39
USP35-207ENST00000530546 MIEF2Q96C03 454 aa12.64□□□□□ -0.39
USP35-207ENST00000530546 WRAP73Q9P2S5 460 aaPredicted RBP12.64□□□□□ -0.39
USP35-207ENST00000530546 SRGAP2O75044 1071 aa12.64□□□□□ -0.39
USP35-207ENST00000530546 KIF11P52732 1056 aa12.64□□□□□ -0.39
USP35-207ENST00000530546 DCAF17Q5H9S7 520 aaPredicted RBP12.64□□□□□ -0.39
USP35-207ENST00000530546 TCERG1LQ5VWI1 586 aa12.64□□□□□ -0.39
USP35-207ENST00000530546 TRIM59Q8IWR1 403 aa12.64□□□□□ -0.39
USP35-207ENST00000530546 BAP1Q92560 729 aa12.64□□□□□ -0.39
USP35-207ENST00000530546 RPGRIP1Q96KN7 1286 aa12.64□□□□□ -0.39
USP35-207ENST00000530546 TEPSINQ96N21 525 aa12.64□□□□□ -0.39
USP35-207ENST00000530546 MYO6Q9UM54 1294 aa12.64□□□□□ -0.39
USP35-207ENST00000530546 CTDP1Q9Y5B0 961 aaPredicted RBP12.64□□□□□ -0.39
USP35-207ENST00000530546 STK24Q9Y6E0 443 aa12.64□□□□□ -0.39
USP35-207ENST00000530546 ZNF536O15090 1300 aa12.64□□□□□ -0.39
USP35-207ENST00000530546 IPO5O00410 1097 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms