RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 ACSF2Q96CM8 615 aaPredicted RBP20.18■□□□□ 0.82
PVT1-220ENST00000524165 RGS18Q9NS28 235 aa20.18■□□□□ 0.82
PVT1-220ENST00000524165 DZANK1Q9NVP4 752 aa20.18■□□□□ 0.82
PVT1-220ENST00000524165 GPR179Q6PRD1 2367 aa20.17■□□□□ 0.82
PVT1-220ENST00000524165 IBSPP21815 317 aaPredicted RBP20.17■□□□□ 0.82
PVT1-220ENST00000524165 MARK3P27448 753 aa20.17■□□□□ 0.82
PVT1-220ENST00000524165 PDE4AP27815 886 aa20.17■□□□□ 0.82
PVT1-220ENST00000524165 SMC1AQ14683 1233 aaKnown RBP20.17■□□□□ 0.82
PVT1-220ENST00000524165 RARS2Q5T160 578 aaKnown RBP20.17■□□□□ 0.82
PVT1-220ENST00000524165 KIAA0319Q5VV43 1072 aa20.17■□□□□ 0.82
PVT1-220ENST00000524165 SMARCAD1Q9H4L7 1026 aa20.17■□□□□ 0.82
PVT1-220ENST00000524165 RTEL1Q9NZ71 1219 aa20.17■□□□□ 0.82
PVT1-220ENST00000524165 NEDD4P46934 1319 aa20.17■□□□□ 0.82
PVT1-220ENST00000524165 C2orf71A6NGG8 1288 aa20.16■□□□□ 0.82
PVT1-220ENST00000524165 C9IYK1 514 aa20.16■□□□□ 0.82
PVT1-220ENST00000524165 CCER2I3L3R5 266 aa20.16■□□□□ 0.82
PVT1-220ENST00000524165 MGEA5O60502 916 aa20.16■□□□□ 0.82
PVT1-220ENST00000524165 CLASP2O75122 1294 aaKnown RBP20.16■□□□□ 0.82
PVT1-220ENST00000524165 IGBP1P78318 339 aa20.16■□□□□ 0.82
PVT1-220ENST00000524165 TMEM62Q0P6H9 643 aa20.16■□□□□ 0.82
PVT1-220ENST00000524165 NFX1Q12986 1120 aaKnown RBP20.16■□□□□ 0.82
PVT1-220ENST00000524165 KCNT2Q6UVM3 1135 aa20.16■□□□□ 0.82
PVT1-220ENST00000524165 NME8Q8N427 588 aa20.16■□□□□ 0.82
PVT1-220ENST00000524165 SEPT1Q8WYJ6 367 aa20.16■□□□□ 0.82
PVT1-220ENST00000524165 GLG1Q92896 1179 aa20.16■□□□□ 0.82
PVT1-220ENST00000524165 WNT16Q9UBV4 365 aa20.16■□□□□ 0.82
PVT1-220ENST00000524165 PCDHA2Q9Y5H9 948 aa20.16■□□□□ 0.82
PVT1-220ENST00000524165 CACNA1IQ9P0X4 2223 aa20.16■□□□□ 0.82
PVT1-220ENST00000524165 GSTTP1A0A1W2PQM5 241 aa20.15■□□□□ 0.82
PVT1-220ENST00000524165 DENND3A2RUS2 1198 aa20.15■□□□□ 0.82
PVT1-220ENST00000524165 SP9P0CG40 484 aa20.15■□□□□ 0.82
PVT1-220ENST00000524165 INSRRP14616 1297 aa20.15■□□□□ 0.82
PVT1-220ENST00000524165 TBC1D8BQ0IIM8 1120 aa20.15■□□□□ 0.82
PVT1-220ENST00000524165 TMEM266Q2M3C6 531 aa20.15■□□□□ 0.82
PVT1-220ENST00000524165 XRRA1Q6P2D8 792 aa20.15■□□□□ 0.82
PVT1-220ENST00000524165 OTOP3Q7RTS5 596 aa20.15■□□□□ 0.82
PVT1-220ENST00000524165 STAG2Q8N3U4 1231 aa20.15■□□□□ 0.82
PVT1-220ENST00000524165 GPR161Q8N6U8 529 aaKnown RBP20.15■□□□□ 0.82
PVT1-220ENST00000524165 SUMF1Q8NBK3 374 aa20.15■□□□□ 0.82
PVT1-220ENST00000524165 RIN2Q8WYP3 895 aaPredicted RBP20.15■□□□□ 0.82
PVT1-220ENST00000524165 ZBTB10Q96DT7 871 aa20.15■□□□□ 0.82
PVT1-220ENST00000524165 ZSCAN10Q96SZ4 725 aaPredicted RBP20.15■□□□□ 0.82
PVT1-220ENST00000524165 ADAM2Q99965 735 aa20.15■□□□□ 0.82
PVT1-220ENST00000524165 ATP6V0A4Q9HBG4 840 aa20.15■□□□□ 0.82
PVT1-220ENST00000524165 TMEM161AQ9NX61 479 aa20.15■□□□□ 0.82
PVT1-220ENST00000524165 LAMA4Q16363 1823 aa20.15■□□□□ 0.82
PVT1-220ENST00000524165 BAZ2BQ9UIF8 2168 aaKnown RBP20.15■□□□□ 0.82
PVT1-220ENST00000524165 KLRF2D3W0D1 207 aa20.14■□□□□ 0.81
PVT1-220ENST00000524165 ATXN1P54253 815 aaKnown RBP20.14■□□□□ 0.81
PVT1-220ENST00000524165 KRT76Q01546 638 aa20.14■□□□□ 0.81
PVT1-220ENST00000524165 MCMDC2Q4G0Z9 681 aa20.14■□□□□ 0.81
PVT1-220ENST00000524165 ODR4Q5SWX8 454 aa20.14■□□□□ 0.81
PVT1-220ENST00000524165 C12orf76Q8N812 135 aaPredicted RBP20.14■□□□□ 0.81
PVT1-220ENST00000524165 ENAHQ8N8S7 591 aaPredicted RBP20.14■□□□□ 0.81
PVT1-220ENST00000524165 TNPO1Q92973 898 aaKnown RBP20.14■□□□□ 0.81
PVT1-220ENST00000524165 BORCS6Q96GS4 357 aa20.14■□□□□ 0.81
PVT1-220ENST00000524165 ZNF558Q96NG5 402 aa20.14■□□□□ 0.81
PVT1-220ENST00000524165 ELAC1Q9H777 363 aaKnown RBP20.14■□□□□ 0.81
PVT1-220ENST00000524165 KCNK12Q9HB15 430 aa20.14■□□□□ 0.81
PVT1-220ENST00000524165 SPG21Q9NZD8 308 aa20.14■□□□□ 0.81
PVT1-220ENST00000524165 STK25O00506 426 aa20.13■□□□□ 0.81
PVT1-220ENST00000524165 FGFR1P11362 822 aa20.13■□□□□ 0.81
PVT1-220ENST00000524165 FAM189BP81408 668 aa20.13■□□□□ 0.81
PVT1-220ENST00000524165 PCNX4Q63HM2 1172 aa20.13■□□□□ 0.81
PVT1-220ENST00000524165 NLRX1Q86UT6 975 aa20.13■□□□□ 0.81
PVT1-220ENST00000524165 TMEM117Q9H0C3 514 aa20.13■□□□□ 0.81
PVT1-220ENST00000524165 IGSF9Q9P2J2 1179 aa20.13■□□□□ 0.81
PVT1-220ENST00000524165 C2orf16Q68DN1 1984 aa20.12■□□□□ 0.81
PVT1-220ENST00000524165 FAM208BQ5VWN6 2430 aa20.12■□□□□ 0.81
PVT1-220ENST00000524165 SMIM35A0A1B0GVV1 85 aa20.12■□□□□ 0.81
PVT1-220ENST00000524165 RPS6KA5O75582 802 aa20.12■□□□□ 0.81
PVT1-220ENST00000524165 BMS1Q14692 1282 aaKnown RBP20.12■□□□□ 0.81
PVT1-220ENST00000524165 LRRC55Q6ZSA7 311 aa20.12■□□□□ 0.81
PVT1-220ENST00000524165 EVI5LQ96CN4 794 aa20.12■□□□□ 0.81
PVT1-220ENST00000524165 KRBA1A5PL33 1030 aa20.11■□□□□ 0.81
PVT1-220ENST00000524165 HOXA2O43364 376 aa20.11■□□□□ 0.81
PVT1-220ENST00000524165 KCNA2P16389 499 aa20.11■□□□□ 0.81
PVT1-220ENST00000524165 RFX1P22670 979 aa20.11■□□□□ 0.81
PVT1-220ENST00000524165 KANK3Q6NY19 840 aa20.11■□□□□ 0.81
PVT1-220ENST00000524165 CCDC149Q6ZUS6 474 aa20.11■□□□□ 0.81
PVT1-220ENST00000524165 LRRC43Q8N309 656 aa20.11■□□□□ 0.81
PVT1-220ENST00000524165 OTUD7AQ8TE49 926 aaPredicted RBP20.11■□□□□ 0.81
PVT1-220ENST00000524165 CDHR1Q96JP9 859 aa20.11■□□□□ 0.81
PVT1-220ENST00000524165 FAM227BQ96M60 508 aa20.11■□□□□ 0.81
PVT1-220ENST00000524165 NOC2LQ9Y3T9 749 aaKnown RBP20.11■□□□□ 0.81
PVT1-220ENST00000524165 A0A0D9SFI3 127 aa20.1■□□□□ 0.81
PVT1-220ENST00000524165 PRR5-ARHGAP8B1AHC4 643 aa20.1■□□□□ 0.81
PVT1-220ENST00000524165 GPR182O15218 404 aa20.1■□□□□ 0.81
PVT1-220ENST00000524165 ATP9AO75110 1047 aa20.1■□□□□ 0.81
PVT1-220ENST00000524165 MX1P20591 662 aa20.1■□□□□ 0.81
PVT1-220ENST00000524165 ARHGAP8P85298 464 aa20.1■□□□□ 0.81
PVT1-220ENST00000524165 TICAM2Q86XR7 235 aa20.1■□□□□ 0.81
PVT1-220ENST00000524165 HOMER1Q86YM7 354 aa20.1■□□□□ 0.81
PVT1-220ENST00000524165 C1orf210Q8IVY1 113 aa20.1■□□□□ 0.81
PVT1-220ENST00000524165 GPRASP2Q96D09 838 aa20.1■□□□□ 0.81
PVT1-220ENST00000524165 CASD1Q96PB1 797 aa20.1■□□□□ 0.81
PVT1-220ENST00000524165 DLGAP2Q9P1A6 1054 aa20.1■□□□□ 0.81
PVT1-220ENST00000524165 MAD2L2Q9UI95 211 aa20.1■□□□□ 0.81
PVT1-220ENST00000524165 ST3GAL5Q9UNP4 418 aa20.1■□□□□ 0.81
PVT1-220ENST00000524165 EVPLQ92817 2033 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms