RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 TBC1D8O95759 1140 aa12.27□□□□□ -0.45
SMPD4-218ENST00000482171 ADSSL1Q8N142 457 aa12.27□□□□□ -0.45
SMPD4-218ENST00000482171 GUF1Q8N442 669 aaKnown RBP12.27□□□□□ -0.45
SMPD4-218ENST00000482171 UHMK1Q8TAS1 419 aaKnown RBP12.27□□□□□ -0.45
SMPD4-218ENST00000482171 SLC10A4Q96EP9 437 aa12.27□□□□□ -0.45
SMPD4-218ENST00000482171 APOL6Q9BWW8 343 aa12.27□□□□□ -0.45
SMPD4-218ENST00000482171 AGTPBP1Q9UPW5 1226 aa12.27□□□□□ -0.45
SMPD4-218ENST00000482171 UTP11Q9Y3A2 253 aaKnown RBP12.27□□□□□ -0.45
SMPD4-218ENST00000482171 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.27□□□□□ -0.45
SMPD4-218ENST00000482171 CLGNO14967 610 aa12.26□□□□□ -0.45
SMPD4-218ENST00000482171 CYTH3O43739 400 aa12.26□□□□□ -0.45
SMPD4-218ENST00000482171 N4BP1O75113 896 aaKnown RBP12.26□□□□□ -0.45
SMPD4-218ENST00000482171 TMEM191BP0C7N4 346 aa12.26□□□□□ -0.45
SMPD4-218ENST00000482171 FXR1P51114 621 aaKnown RBP eCLIP12.26□□□□□ -0.45
SMPD4-218ENST00000482171 BAATQ14032 418 aaPredicted RBP12.26□□□□□ -0.45
SMPD4-218ENST00000482171 MESDQ14696 234 aa12.26□□□□□ -0.45
SMPD4-218ENST00000482171 CCDC170Q8IYT3 715 aa12.26□□□□□ -0.45
SMPD4-218ENST00000482171 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.26□□□□□ -0.45
SMPD4-218ENST00000482171 CHP1Q99653 195 aa12.26□□□□□ -0.45
SMPD4-218ENST00000482171 ASIC3Q9UHC3 531 aa12.26□□□□□ -0.45
SMPD4-218ENST00000482171 HPSEQ9Y251 543 aa12.26□□□□□ -0.45
SMPD4-218ENST00000482171 HEXIM1O94992 359 aaKnown RBP12.26□□□□□ -0.45
SMPD4-218ENST00000482171 TRIM49P0CI25 452 aa12.26□□□□□ -0.45
SMPD4-218ENST00000482171 TRIM49CP0CI26 452 aa12.26□□□□□ -0.45
SMPD4-218ENST00000482171 GCLMP48507 274 aa12.26□□□□□ -0.45
SMPD4-218ENST00000482171 EPHB4P54760 987 aa12.26□□□□□ -0.45
SMPD4-218ENST00000482171 CXCL9Q07325 125 aa12.26□□□□□ -0.45
SMPD4-218ENST00000482171 SNCBQ16143 134 aa12.26□□□□□ -0.45
SMPD4-218ENST00000482171 SWSAP1Q6NVH7 229 aa12.26□□□□□ -0.45
SMPD4-218ENST00000482171 MIS18BP1Q6P0N0 1132 aa12.26□□□□□ -0.45
SMPD4-218ENST00000482171 CCDC105Q8IYK2 499 aa12.26□□□□□ -0.45
SMPD4-218ENST00000482171 CERS5Q8N5B7 392 aa12.26□□□□□ -0.45
SMPD4-218ENST00000482171 MGARPQ8TDB4 240 aa12.26□□□□□ -0.45
SMPD4-218ENST00000482171 NT5C1BQ96P26 610 aa12.26□□□□□ -0.45
SMPD4-218ENST00000482171 KRT12Q99456 494 aa12.26□□□□□ -0.45
SMPD4-218ENST00000482171 GABBR1Q9UBS5 961 aa12.26□□□□□ -0.45
SMPD4-218ENST00000482171 CD44P16070 742 aaKnown RBP12.26□□□□□ -0.45
SMPD4-218ENST00000482171 PPP2R5AQ15172 486 aa12.26□□□□□ -0.45
SMPD4-218ENST00000482171 SPATS2Q86XZ4 545 aaKnown RBP12.26□□□□□ -0.45
SMPD4-218ENST00000482171 CDHR1Q96JP9 859 aa12.26□□□□□ -0.45
SMPD4-218ENST00000482171 NLRP4Q96MN2 994 aa12.26□□□□□ -0.45
SMPD4-218ENST00000482171 MMS19Q96T76 1030 aa12.26□□□□□ -0.45
SMPD4-218ENST00000482171 DPH5Q9H2P9 285 aa12.26□□□□□ -0.45
SMPD4-218ENST00000482171 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.26□□□□□ -0.45
SMPD4-218ENST00000482171 KRIT1O00522 736 aa12.25□□□□□ -0.45
SMPD4-218ENST00000482171 SHMT1P34896 483 aa12.25□□□□□ -0.45
SMPD4-218ENST00000482171 ZBTB16Q05516 673 aa12.25□□□□□ -0.45
SMPD4-218ENST00000482171 FAM160B1Q5W0V3 765 aa12.25□□□□□ -0.45
SMPD4-218ENST00000482171 MSANTD4Q8NCY6 345 aa12.25□□□□□ -0.45
SMPD4-218ENST00000482171 TCP11Q8WWU5 503 aa12.25□□□□□ -0.45
SMPD4-218ENST00000482171 N4BP2L2Q92802 583 aaPredicted RBP12.25□□□□□ -0.45
SMPD4-218ENST00000482171 ZKSCAN4Q969J2 545 aaPredicted RBP12.25□□□□□ -0.45
SMPD4-218ENST00000482171 AKT3Q9Y243 479 aa12.25□□□□□ -0.45
SMPD4-218ENST00000482171 FOXP2O15409 715 aa12.25□□□□□ -0.45
SMPD4-218ENST00000482171 PSAPP07602 524 aa12.25□□□□□ -0.45
SMPD4-218ENST00000482171 CA8P35219 290 aa12.25□□□□□ -0.45
SMPD4-218ENST00000482171 PIK3CAP42336 1068 aa12.25□□□□□ -0.45
SMPD4-218ENST00000482171 PDE6CP51160 858 aa12.25□□□□□ -0.45
SMPD4-218ENST00000482171 ATP11AP98196 1134 aa12.25□□□□□ -0.45
SMPD4-218ENST00000482171 NEDD9Q14511 834 aa12.25□□□□□ -0.45
SMPD4-218ENST00000482171 PDIA5Q14554 519 aa12.25□□□□□ -0.45
SMPD4-218ENST00000482171 KNOP1Q1ED39 458 aaKnown RBP12.25□□□□□ -0.45
SMPD4-218ENST00000482171 APOBEC3HQ6NTF7 200 aaKnown RBP12.25□□□□□ -0.45
SMPD4-218ENST00000482171 NSUN6Q8TEA1 469 aaKnown RBP12.25□□□□□ -0.45
SMPD4-218ENST00000482171 CPSF2Q9P2I0 782 aaKnown RBP12.25□□□□□ -0.45
SMPD4-218ENST00000482171 WDR64B1ANS9 1081 aa12.25□□□□□ -0.45
SMPD4-218ENST00000482171 HOXA10P31260 410 aaPredicted RBP12.25□□□□□ -0.45
SMPD4-218ENST00000482171 QARSP47897 775 aaKnown RBP12.25□□□□□ -0.45
SMPD4-218ENST00000482171 TFAMQ00059 246 aaKnown RBP12.25□□□□□ -0.45
SMPD4-218ENST00000482171 SETDB1Q15047 1291 aa12.25□□□□□ -0.45
SMPD4-218ENST00000482171 INTS8Q75QN2 995 aaKnown RBP12.25□□□□□ -0.45
SMPD4-218ENST00000482171 ARMC9Q7Z3E5 817 aa12.25□□□□□ -0.45
SMPD4-218ENST00000482171 SYCE1Q8N0S2 351 aa12.25□□□□□ -0.45
SMPD4-218ENST00000482171 CCDC77Q9BR77 488 aa12.25□□□□□ -0.45
SMPD4-218ENST00000482171 HOXC10Q9NYD6 342 aa12.25□□□□□ -0.45
SMPD4-218ENST00000482171 PCDHA13Q9Y5I0 950 aa12.25□□□□□ -0.45
SMPD4-218ENST00000482171 K7ERI5 159 aa12.25□□□□□ -0.45
SMPD4-218ENST00000482171 TMOD1P28289 359 aa12.25□□□□□ -0.45
SMPD4-218ENST00000482171 KCNB1Q14721 858 aa12.25□□□□□ -0.45
SMPD4-218ENST00000482171 CYFIP1Q7L576 1253 aa12.25□□□□□ -0.45
SMPD4-218ENST00000482171 SESTD1Q86VW0 696 aa12.25□□□□□ -0.45
SMPD4-218ENST00000482171 ZNF354CQ86Y25 554 aa12.25□□□□□ -0.45
SMPD4-218ENST00000482171 NAP1L3Q99457 506 aaPredicted RBP12.25□□□□□ -0.45
SMPD4-218ENST00000482171 TMEM206Q9H813 350 aa12.25□□□□□ -0.45
SMPD4-218ENST00000482171 TSKSQ9UJT2 592 aa12.25□□□□□ -0.45
SMPD4-218ENST00000482171 SPDYE2BA6NHP3 402 aa12.24□□□□□ -0.45
SMPD4-218ENST00000482171 SPDYE6P0CI01 402 aa12.24□□□□□ -0.45
SMPD4-218ENST00000482171 RHBDL3P58872 404 aa12.24□□□□□ -0.45
SMPD4-218ENST00000482171 ALKBH5Q6P6C2 394 aaKnown RBP12.24□□□□□ -0.45
SMPD4-218ENST00000482171 ZNF365Q70YC5 407 aa12.24□□□□□ -0.45
SMPD4-218ENST00000482171 VSIG1Q86XK7 387 aa12.24□□□□□ -0.45
SMPD4-218ENST00000482171 KSR1Q8IVT5 923 aa12.24□□□□□ -0.45
SMPD4-218ENST00000482171 AGPAT5Q9NUQ2 364 aa12.24□□□□□ -0.45
SMPD4-218ENST00000482171 FERP16591 822 aa12.24□□□□□ -0.45
SMPD4-218ENST00000482171 GFPT1Q06210 699 aaPredicted RBP12.24□□□□□ -0.45
SMPD4-218ENST00000482171 MUM1L1Q5H9M0 696 aa12.24□□□□□ -0.45
SMPD4-218ENST00000482171 SAAL1Q96ER3 474 aa12.24□□□□□ -0.45
SMPD4-218ENST00000482171 ELP3Q9H9T3 547 aa12.24□□□□□ -0.45
SMPD4-218ENST00000482171 NXF1Q9UBU9 619 aaKnown RBP12.24□□□□□ -0.45
SMPD4-218ENST00000482171 IKBKGQ9Y6K9 419 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms