RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, human

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC6-223	ENST00000480525	IQCF3	P0C7M6	154 aa		5.69	□□□□□ -1.5
HDAC6-223	ENST00000480525	SPATA31C1	P0DKV0	1188 aa		5.69	□□□□□ -1.5
HDAC6-223	ENST00000480525	CKB	P12277	381 aa		5.69	□□□□□ -1.5
HDAC6-223	ENST00000480525	ACTN1	P12814	892 aa		5.69	□□□□□ -1.5
HDAC6-223	ENST00000480525	INSRR	P14616	1297 aa		5.69	□□□□□ -1.5
HDAC6-223	ENST00000480525	RAG1	P15918	1043 aa		5.69	□□□□□ -1.5
HDAC6-223	ENST00000480525	YWHAB	P31946	246 aa	Known RBP	5.69	□□□□□ -1.5
HDAC6-223	ENST00000480525	MCM7	P33993	719 aa		5.69	□□□□□ -1.5
HDAC6-223	ENST00000480525	RARRES1	P49788	294 aa		5.69	□□□□□ -1.5
HDAC6-223	ENST00000480525	DNM2	P50570	870 aa		5.69	□□□□□ -1.5
HDAC6-223	ENST00000480525	PRKCE	Q02156	737 aa		5.69	□□□□□ -1.5
HDAC6-223	ENST00000480525	FPGS	Q05932	587 aa		5.69	□□□□□ -1.5
HDAC6-223	ENST00000480525	MGAT3	Q09327	533 aa		5.69	□□□□□ -1.5
HDAC6-223	ENST00000480525	KRT79	Q5XKE5	535 aa		5.69	□□□□□ -1.5
HDAC6-223	ENST00000480525	CNNM4	Q6P4Q7	775 aa		5.69	□□□□□ -1.5
HDAC6-223	ENST00000480525	MTHFD1L	Q6UB35	978 aa		5.69	□□□□□ -1.5
HDAC6-223	ENST00000480525	CLEC17A	Q6ZS10	378 aa		5.69	□□□□□ -1.5
HDAC6-223	ENST00000480525	ANO5	Q75V66	913 aa		5.69	□□□□□ -1.5
HDAC6-223	ENST00000480525	LRRC8D	Q7L1W4	858 aa		5.69	□□□□□ -1.5
HDAC6-223	ENST00000480525	LINC00301	Q8NCQ3	95 aa		5.69	□□□□□ -1.5
HDAC6-223	ENST00000480525	SLC17A8	Q8NDX2	589 aa		5.69	□□□□□ -1.5
HDAC6-223	ENST00000480525	SLC7A3	Q8WY07	619 aa		5.69	□□□□□ -1.5
HDAC6-223	ENST00000480525	HERVK_113	Q902F9	699 aa		5.69	□□□□□ -1.5
HDAC6-223	ENST00000480525	DPF3	Q92784	378 aa		5.69	□□□□□ -1.5
HDAC6-223	ENST00000480525	TRIM43	Q96BQ3	446 aa	Predicted RBP	5.69	□□□□□ -1.5
HDAC6-223	ENST00000480525	LBHD1	Q9BQE6	289 aa	Predicted RBP	5.69	□□□□□ -1.5
HDAC6-223	ENST00000480525	EIF2AK1	Q9BQI3	630 aa	Known RBP	5.69	□□□□□ -1.5
HDAC6-223	ENST00000480525	SCAND2P	Q9GZW5	306 aa	Predicted RBP	5.69	□□□□□ -1.5
HDAC6-223	ENST00000480525	WNT8A	Q9H1J5	351 aa		5.69	□□□□□ -1.5
HDAC6-223	ENST00000480525	TMEM60	Q9H2L4	133 aa		5.69	□□□□□ -1.5
HDAC6-223	ENST00000480525	BCAS3	Q9H6U6	928 aa		5.69	□□□□□ -1.5
HDAC6-223	ENST00000480525	IL23A	Q9NPF7	189 aa		5.69	□□□□□ -1.5
HDAC6-223	ENST00000480525	CYP26B1	Q9NR63	512 aa		5.69	□□□□□ -1.5
HDAC6-223	ENST00000480525	GABBR1	Q9UBS5	961 aa		5.69	□□□□□ -1.5
HDAC6-223	ENST00000480525	STK17A	Q9UEE5	414 aa		5.69	□□□□□ -1.5
HDAC6-223	ENST00000480525	LRWD1	Q9UFC0	647 aa		5.69	□□□□□ -1.5
HDAC6-223	ENST00000480525	NOD1	Q9Y239	953 aa		5.69	□□□□□ -1.5
HDAC6-223	ENST00000480525	ATP11B	Q9Y2G3	1177 aa		5.69	□□□□□ -1.5
HDAC6-223	ENST00000480525	SAMM50	Q9Y512	469 aa		5.69	□□□□□ -1.5
HDAC6-223	ENST00000480525	MYO9B	Q13459	2157 aa		5.69	□□□□□ -1.5
HDAC6-223	ENST00000480525	GBF1	Q92538	1859 aa		5.68	□□□□□ -1.5
HDAC6-223	ENST00000480525	VPS37C	A5D8V6	355 aa	Predicted RBP	5.68	□□□□□ -1.5
HDAC6-223	ENST00000480525		M0QZ92	97 aa		5.68	□□□□□ -1.5
HDAC6-223	ENST00000480525	WNT7A	O00755	349 aa		5.68	□□□□□ -1.5
HDAC6-223	ENST00000480525	TREH	O43280	583 aa		5.68	□□□□□ -1.5
HDAC6-223	ENST00000480525	MARCH6	O60337	910 aa		5.68	□□□□□ -1.5
HDAC6-223	ENST00000480525	EYA4	O95677	639 aa		5.68	□□□□□ -1.5
HDAC6-223	ENST00000480525	MYC	P01106	439 aa	Predicted RBP	5.68	□□□□□ -1.5
HDAC6-223	ENST00000480525	GUCY2C	P25092	1073 aa		5.68	□□□□□ -1.5
HDAC6-223	ENST00000480525	KLRC1	P26715	233 aa		5.68	□□□□□ -1.5
HDAC6-223	ENST00000480525	TXK	P42681	527 aa		5.68	□□□□□ -1.5
HDAC6-223	ENST00000480525	PSMC6	P62333	389 aa		5.68	□□□□□ -1.5
HDAC6-223	ENST00000480525	IRX5	P78411	483 aa	Predicted RBP	5.68	□□□□□ -1.5
HDAC6-223	ENST00000480525	SMAD3	P84022	425 aa	Known RBP	5.68	□□□□□ -1.5
HDAC6-223	ENST00000480525	GUCY1B3	Q02153	619 aa		5.68	□□□□□ -1.5
HDAC6-223	ENST00000480525	TBC1D8B	Q0IIM8	1120 aa		5.68	□□□□□ -1.5
HDAC6-223	ENST00000480525	PPP2R5A	Q15172	486 aa		5.68	□□□□□ -1.5
HDAC6-223	ENST00000480525	SF3A1	Q15459	793 aa	Known RBP	5.68	□□□□□ -1.5
HDAC6-223	ENST00000480525	TMEM119	Q4V9L6	283 aa		5.68	□□□□□ -1.5
HDAC6-223	ENST00000480525	PLEKHG4	Q58EX7	1191 aa		5.68	□□□□□ -1.5
HDAC6-223	ENST00000480525	MCTP1	Q6DN14	999 aa		5.68	□□□□□ -1.5
HDAC6-223	ENST00000480525	FAM109B	Q6ICB4	259 aa	Predicted RBP	5.68	□□□□□ -1.5
HDAC6-223	ENST00000480525	CNKSR3	Q6P9H4	555 aa		5.68	□□□□□ -1.5
HDAC6-223	ENST00000480525	TSHZ1	Q6ZSZ6	1077 aa		5.68	□□□□□ -1.5
HDAC6-223	ENST00000480525	SRGAP1	Q7Z6B7	1085 aa		5.68	□□□□□ -1.5
HDAC6-223	ENST00000480525	CATSPER3	Q86XQ3	398 aa		5.68	□□□□□ -1.5
HDAC6-223	ENST00000480525	TRIM50	Q86XT4	487 aa		5.68	□□□□□ -1.5
HDAC6-223	ENST00000480525	ELOA2	Q8IYF1	753 aa	Predicted RBP	5.68	□□□□□ -1.5
HDAC6-223	ENST00000480525	C7orf61	Q8IZ16	206 aa		5.68	□□□□□ -1.5
HDAC6-223	ENST00000480525	KIAA0319L	Q8IZA0	1049 aa		5.68	□□□□□ -1.5
HDAC6-223	ENST00000480525	TDH	Q8IZJ6	230 aa		5.68	□□□□□ -1.5
HDAC6-223	ENST00000480525	KRI1	Q8N9T8	703 aa	Known RBP	5.68	□□□□□ -1.5
HDAC6-223	ENST00000480525	DHX38	Q92620	1227 aa	Known RBP	5.68	□□□□□ -1.5
HDAC6-223	ENST00000480525	KIFAP3	Q92845	792 aa		5.68	□□□□□ -1.5
HDAC6-223	ENST00000480525	VTI1A	Q96AJ9	217 aa		5.68	□□□□□ -1.5
HDAC6-223	ENST00000480525	CCDC51	Q96ER9	411 aa		5.68	□□□□□ -1.5
HDAC6-223	ENST00000480525	PRIMPOL	Q96LW4	560 aa		5.68	□□□□□ -1.5
HDAC6-223	ENST00000480525	MAP7D2	Q96T17	732 aa		5.68	□□□□□ -1.5
HDAC6-223	ENST00000480525	SLC9A7	Q96T83	725 aa		5.68	□□□□□ -1.5
HDAC6-223	ENST00000480525	NTPCR	Q9BSD7	190 aa	Known RBP	5.68	□□□□□ -1.5
HDAC6-223	ENST00000480525	CHST12	Q9NRB3	414 aa		5.68	□□□□□ -1.5
HDAC6-223	ENST00000480525	TRMT13	Q9NUP7	481 aa	Known RBP	5.68	□□□□□ -1.5
HDAC6-223	ENST00000480525	SETD4	Q9NVD3	440 aa		5.68	□□□□□ -1.5
HDAC6-223	ENST00000480525	USP25	Q9UHP3	1055 aa		5.68	□□□□□ -1.5
HDAC6-223	ENST00000480525	RCOR1	Q9UKL0	485 aa		5.68	□□□□□ -1.5
HDAC6-223	ENST00000480525	ODF2L	Q9ULJ1	636 aa		5.68	□□□□□ -1.5
HDAC6-223	ENST00000480525	TRPC6	Q9Y210	931 aa		5.68	□□□□□ -1.5
HDAC6-223	ENST00000480525	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	5.68	□□□□□ -1.5
HDAC6-223	ENST00000480525	CIT	O14578	2027 aa		5.68	□□□□□ -1.5
HDAC6-223	ENST00000480525	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	5.68	□□□□□ -1.5
HDAC6-223	ENST00000480525	NLRC5	Q86WI3	1866 aa		5.68	□□□□□ -1.5
HDAC6-223	ENST00000480525	PDCD11	Q14690	1871 aa	Known RBP	5.67	□□□□□ -1.5
HDAC6-223	ENST00000480525		A0A1W2PQ27	194 aa		5.67	□□□□□ -1.5
HDAC6-223	ENST00000480525		A0A1W2PQ64	194 aa		5.67	□□□□□ -1.5
HDAC6-223	ENST00000480525		A0A1W2PQD8	194 aa		5.67	□□□□□ -1.5
HDAC6-223	ENST00000480525	POTEM	A6NI47	508 aa		5.67	□□□□□ -1.5
HDAC6-223	ENST00000480525	RSPH10B2	B2RC85	870 aa		5.67	□□□□□ -1.5
HDAC6-223	ENST00000480525		H0YCG3	227 aa		5.67	□□□□□ -1.5
HDAC6-223	ENST00000480525		H0YGN5	161 aa		5.67	□□□□□ -1.5
HDAC6-223	ENST00000480525	CUTA	O60888	179 aa		5.67	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms