RNA–Protein interactions for RNA: ENST00000475835.2

LSM2-211, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 5

Gene LSM2, Length 211 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM2-211	ENST00000475835	ARHGEF28	Q8N1W1	1705 aa	Known RBP	4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	ADGRB2	O60241	1585 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	TRAV6	A0A075B6T7	132 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	ANO9	A1A5B4	782 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	TMEM88B	A6NKF7	163 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	OR5K4	A6NMS3	321 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835		A8MVJ9	347 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	EFCAB8	A8MWE9	144 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	KIF28P	B7ZC32	967 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	BTBD19	C9JJ37	291 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	STX16-NPEPL1	H3BU86	382 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	MATN2	O00339	956 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	TRDMT1	O14717	391 aa	Known RBP	4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	APAF1	O14727	1248 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	MAP2K7	O14733	419 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	MAPK13	O15264	365 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	NCAM2	O15394	837 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	MEFV	O15553	781 aa	Predicted RBP	4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	ZW10	O43264	779 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	TSPAN6	O43657	245 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	PLOD3	O60568	738 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	PRMT3	O60678	531 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	TSPAN9	O75954	239 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	LCA5L	O95447	670 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	GNRH1	P01148	92 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	ENO2	P09104	434 aa	Predicted RBP	4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	ALOX5	P09917	674 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	CALM1	P0DP23	149 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	CALM2	P0DP24	149 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	CALM3	P0DP25	149 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	TOP1	P11387	765 aa	Known RBP	4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	CYP2C9	P11712	490 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	CDK4	P11802	303 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	PCNA	P12004	261 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	SCG2	P13521	617 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	ATP6V1B1	P15313	513 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	NAGA	P17050	411 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	TBXAS1	P24557	533 aa	Predicted RBP	4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	NFKBIA	P25963	317 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	AXL	P30530	894 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	SERPINB6	P35237	376 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	HNF1B	P35680	557 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	CHKA	P35790	457 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	ABCG1	P45844	678 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	KCNJ6	P48051	423 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	TUFM	P49411	452 aa	Known RBP	4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	C21orf58	P58505	322 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	GNAI1	P63096	354 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	CYP4F2	P78329	520 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	RPP38	P78345	283 aa	Known RBP	4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	EXOSC10	Q01780	885 aa	Known RBP	4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	CYP4F3	Q08477	520 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	FAP	Q12884	760 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	TRIM32	Q13049	653 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	PRKG1	Q13976	671 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	CYLC2	Q14093	348 aa	Predicted RBP	4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	E2F2	Q14209	437 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	SSPN	Q14714	243 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	CNGA2	Q16280	664 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	ARL13B	Q3SXY8	428 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835		Q3ZCU0	254 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	FUT11	Q495W5	492 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	PLEKHG4	Q58EX7	1191 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	FAM83B	Q5T0W9	1011 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	SPECC1L	Q69YQ0	1117 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	OR7E24	Q6IFN5	339 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	PDE12	Q6L8Q7	609 aa	Known RBP	4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	TATDN1	Q6P1N9	297 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	TTC23L	Q6PF05	361 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	RHOU	Q7L0Q8	258 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	BNIPL	Q7Z465	357 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	PNMA8A	Q86V59	439 aa	Predicted RBP	4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	OSTM1	Q86WC4	334 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	ERICH1	Q86X53	443 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	TRIM50	Q86XT4	487 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	C12orf56	Q8IXR9	622 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	TBC1D21	Q8IYX1	336 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	FAM9C	Q8IZT9	166 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	LRRC47	Q8N1G4	583 aa	Known RBP	4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	ANKRD42	Q8N9B4	389 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	ARRDC4	Q8NCT1	418 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	SUPT20H	Q8NEM7	779 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	CFAP61	Q8NHU2	1237 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	ENKUR	Q8TC29	256 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	NOC3L	Q8WTT2	800 aa	Known RBP	4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	WDR60	Q8WVS4	1066 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	NCSTN	Q92542	709 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	SEPT8	Q92599	483 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	EFHD2	Q96C19	240 aa	Predicted RBP	4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	CHFR	Q96EP1	664 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	TRMT2B	Q96GJ1	504 aa	Known RBP	4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	ANKRD36BP1	Q96IX9	119 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	PGBD1	Q96JS3	809 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	FAM167A	Q96KS9	214 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	GDAP1L1	Q96MZ0	367 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	TUBGCP5	Q96RT8	1024 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	CDRT15	Q96T59	188 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	MNT	Q99583	582 aa		4.16	□□□□□ -1.74
LSM2-211	ENST00000475835	NDN	Q99608	321 aa		4.16	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms