RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 TFDP2Q14188 446 aa5□□□□□ -1.61
CCNL1-215ENST00000474539 TMCO4Q5TGY1 634 aa5□□□□□ -1.61
CCNL1-215ENST00000474539 LMBRD2Q68DH5 695 aaPredicted RBP5□□□□□ -1.61
CCNL1-215ENST00000474539 TTBK2Q6IQ55 1244 aa5□□□□□ -1.61
CCNL1-215ENST00000474539 NIPA1Q7RTP0 329 aa5□□□□□ -1.61
CCNL1-215ENST00000474539 NT5DC4Q86YG4 428 aa5□□□□□ -1.61
CCNL1-215ENST00000474539 FAM186BQ8IYM0 893 aa5□□□□□ -1.61
CCNL1-215ENST00000474539 NME8Q8N427 588 aa5□□□□□ -1.61
CCNL1-215ENST00000474539 FBXO18Q8NFZ0 1043 aa5□□□□□ -1.61
CCNL1-215ENST00000474539 ATL2Q8NHH9 583 aa5□□□□□ -1.61
CCNL1-215ENST00000474539 GANCQ8TET4 914 aa5□□□□□ -1.61
CCNL1-215ENST00000474539 FAM227BQ96M60 508 aa5□□□□□ -1.61
CCNL1-215ENST00000474539 HAUS8Q9BT25 410 aa5□□□□□ -1.61
CCNL1-215ENST00000474539 PPP1R12CQ9BZL4 782 aa5□□□□□ -1.61
CCNL1-215ENST00000474539 CENPHQ9H3R5 247 aa5□□□□□ -1.61
CCNL1-215ENST00000474539 STARD7Q9NQZ5 370 aa5□□□□□ -1.61
CCNL1-215ENST00000474539 DISC1Q9NRI5 854 aa5□□□□□ -1.61
CCNL1-215ENST00000474539 NKIRAS1Q9NYS0 192 aa5□□□□□ -1.61
CCNL1-215ENST00000474539 C3P01024 1663 aa5□□□□□ -1.61
CCNL1-215ENST00000474539 SPDYE2BA6NHP3 402 aa5□□□□□ -1.61
CCNL1-215ENST00000474539 POLR2DO15514 142 aaKnown RBP5□□□□□ -1.61
CCNL1-215ENST00000474539 PPFIA4O75335 1185 aa5□□□□□ -1.61
CCNL1-215ENST00000474539 URI1O94763 535 aaPredicted RBP5□□□□□ -1.61
CCNL1-215ENST00000474539 ABL1P00519 1130 aa5□□□□□ -1.61
CCNL1-215ENST00000474539 SPDYE6P0CI01 402 aa5□□□□□ -1.61
CCNL1-215ENST00000474539 ZNF18P17022 549 aa5□□□□□ -1.61
CCNL1-215ENST00000474539 HMGCS2P54868 508 aa5□□□□□ -1.61
CCNL1-215ENST00000474539 BACE1P56817 501 aa5□□□□□ -1.61
CCNL1-215ENST00000474539 ADAM9Q13443 819 aa5□□□□□ -1.61
CCNL1-215ENST00000474539 SPDYE2Q495Y8 402 aa5□□□□□ -1.61
CCNL1-215ENST00000474539 FAM182BQ5T319 152 aa5□□□□□ -1.61
CCNL1-215ENST00000474539 CYP4A22Q5TCH4 519 aa5□□□□□ -1.61
CCNL1-215ENST00000474539 NOTUMQ6P988 496 aa5□□□□□ -1.61
CCNL1-215ENST00000474539 KCTD1Q719H9 257 aa5□□□□□ -1.61
CCNL1-215ENST00000474539 SPATA24Q86W54 205 aa5□□□□□ -1.61
CCNL1-215ENST00000474539 TTC16Q8NEE8 873 aa5□□□□□ -1.61
CCNL1-215ENST00000474539 TBCKQ8TEA7 893 aa5□□□□□ -1.61
CCNL1-215ENST00000474539 GMCL1Q96IK5 515 aa5□□□□□ -1.61
CCNL1-215ENST00000474539 GAS2L1Q99501 681 aaPredicted RBP5□□□□□ -1.61
CCNL1-215ENST00000474539 KIAA1683Q9H0B3 1180 aa5□□□□□ -1.61
CCNL1-215ENST00000474539 ABHD16BQ9H3Z7 469 aa5□□□□□ -1.61
CCNL1-215ENST00000474539 KIF9Q9HAQ2 790 aa5□□□□□ -1.61
CCNL1-215ENST00000474539 AKAP7Q9P0M2 348 aaPredicted RBP5□□□□□ -1.61
CCNL1-215ENST00000474539 ANKFY1Q9P2R3 1169 aa5□□□□□ -1.61
CCNL1-215ENST00000474539 UXTQ9UBK9 157 aaPredicted RBP5□□□□□ -1.61
CCNL1-215ENST00000474539 MRFAP1Q9Y605 127 aa5□□□□□ -1.61
CCNL1-215ENST00000474539 MED1Q15648 1581 aaPredicted RBP5□□□□□ -1.61
CCNL1-215ENST00000474539 GLTPD2A6NH11 291 aa4.99□□□□□ -1.61
CCNL1-215ENST00000474539 FOXP2O15409 715 aa4.99□□□□□ -1.61
CCNL1-215ENST00000474539 ARHGAP6O43182 974 aa4.99□□□□□ -1.61
CCNL1-215ENST00000474539 TBC1D12O60347 775 aa4.99□□□□□ -1.61
CCNL1-215ENST00000474539 LRG1P02750 347 aa4.99□□□□□ -1.61
CCNL1-215ENST00000474539 MMP1P03956 469 aa4.99□□□□□ -1.61
CCNL1-215ENST00000474539 SYT1P21579 422 aa4.99□□□□□ -1.61
CCNL1-215ENST00000474539 SERPINB6P35237 376 aa4.99□□□□□ -1.61
CCNL1-215ENST00000474539 CAP2P40123 477 aa4.99□□□□□ -1.61
CCNL1-215ENST00000474539 TECP42680 631 aa4.99□□□□□ -1.61
CCNL1-215ENST00000474539 GEMIN4P57678 1058 aaKnown RBP4.99□□□□□ -1.61
CCNL1-215ENST00000474539 RBP5P82980 135 aa4.99□□□□□ -1.61
CCNL1-215ENST00000474539 SP3Q02447 781 aa4.99□□□□□ -1.61
CCNL1-215ENST00000474539 ZSCAN30Q86W11 494 aa4.99□□□□□ -1.61
CCNL1-215ENST00000474539 CCDC63Q8NA47 563 aa4.99□□□□□ -1.61
CCNL1-215ENST00000474539 KLHDC4Q8TBB5 520 aa4.99□□□□□ -1.61
CCNL1-215ENST00000474539 PI4K2BQ8TCG2 481 aa4.99□□□□□ -1.61
CCNL1-215ENST00000474539 PHKBQ93100 1093 aa4.99□□□□□ -1.61
CCNL1-215ENST00000474539 TMEM47Q9BQJ4 181 aa4.99□□□□□ -1.61
CCNL1-215ENST00000474539 TRIM56Q9BRZ2 755 aaKnown RBP4.99□□□□□ -1.61
CCNL1-215ENST00000474539 DDX23Q9BUQ8 820 aaKnown RBP4.99□□□□□ -1.61
CCNL1-215ENST00000474539 RRAGCQ9HB90 399 aa4.99□□□□□ -1.61
CCNL1-215ENST00000474539 RAVER2Q9HCJ3 691 aaKnown RBP4.99□□□□□ -1.61
CCNL1-215ENST00000474539 KIAA1024Q9UPX6 916 aa4.99□□□□□ -1.61
CCNL1-215ENST00000474539 PCDHB4Q9Y5E5 795 aa4.99□□□□□ -1.61
CCNL1-215ENST00000474539 TADA2AO75478 443 aa4.99□□□□□ -1.61
CCNL1-215ENST00000474539 ICAM1P05362 532 aa4.99□□□□□ -1.61
CCNL1-215ENST00000474539 URODP06132 367 aa4.99□□□□□ -1.61
CCNL1-215ENST00000474539 CYP2C8P10632 490 aa4.99□□□□□ -1.61
CCNL1-215ENST00000474539 RAG1P15918 1043 aa4.99□□□□□ -1.61
CCNL1-215ENST00000474539 ADORA1P30542 326 aa4.99□□□□□ -1.61
CCNL1-215ENST00000474539 MXI1P50539 228 aa4.99□□□□□ -1.61
CCNL1-215ENST00000474539 ZBTB16Q05516 673 aa4.99□□□□□ -1.61
CCNL1-215ENST00000474539 TYRO3Q06418 890 aa4.99□□□□□ -1.61
CCNL1-215ENST00000474539 MTMR2Q13614 643 aa4.99□□□□□ -1.61
CCNL1-215ENST00000474539 GIT2Q14161 759 aa4.99□□□□□ -1.61
CCNL1-215ENST00000474539 TAF11Q15544 211 aa4.99□□□□□ -1.61
CCNL1-215ENST00000474539 MAN2A1Q16706 1144 aa4.99□□□□□ -1.61
CCNL1-215ENST00000474539 EXOC3L4Q17RC7 722 aa4.99□□□□□ -1.61
CCNL1-215ENST00000474539 ZNF568Q3ZCX4 644 aa4.99□□□□□ -1.61
CCNL1-215ENST00000474539 SH2D4BQ5SQS7 431 aa4.99□□□□□ -1.61
CCNL1-215ENST00000474539 CCDC122Q5T0U0 273 aa4.99□□□□□ -1.61
CCNL1-215ENST00000474539 FYB2Q5VWT5 728 aa4.99□□□□□ -1.61
CCNL1-215ENST00000474539 NECAB2Q7Z6G3 386 aa4.99□□□□□ -1.61
CCNL1-215ENST00000474539 ANKS4BQ8N8V4 417 aa4.99□□□□□ -1.61
CCNL1-215ENST00000474539 TMEM35BQ8NCS4 154 aa4.99□□□□□ -1.61
CCNL1-215ENST00000474539 APBB2Q92870 758 aa4.99□□□□□ -1.61
CCNL1-215ENST00000474539 NSUN4Q96CB9 384 aaKnown RBP4.99□□□□□ -1.61
CCNL1-215ENST00000474539 APOL6Q9BWW8 343 aa4.99□□□□□ -1.61
CCNL1-215ENST00000474539 PUS3Q9BZE2 481 aaKnown RBP4.99□□□□□ -1.61
CCNL1-215ENST00000474539 THAP9Q9H5L6 903 aa4.99□□□□□ -1.61
CCNL1-215ENST00000474539 ST7Q9NRC1 585 aa4.99□□□□□ -1.61
CCNL1-215ENST00000474539 KIAA1257Q9ULG3 409 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms