RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 CDKL5O76039 1030 aa10.2□□□□□ -0.78
USF1-204ENST00000472217 TDP2O95551 362 aa10.2□□□□□ -0.78
USF1-204ENST00000472217 CYP3A7P24462 503 aa10.2□□□□□ -0.78
USF1-204ENST00000472217 AK2P54819 239 aa10.2□□□□□ -0.78
USF1-204ENST00000472217 PAK2Q13177 524 aa10.2□□□□□ -0.78
USF1-204ENST00000472217 NONOQ15233 471 aaKnown RBP eCLIP10.2□□□□□ -0.78
USF1-204ENST00000472217 UGCGQ16739 394 aa10.2□□□□□ -0.78
USF1-204ENST00000472217 TMEM266Q2M3C6 531 aa10.2□□□□□ -0.78
USF1-204ENST00000472217 LRCH2Q5VUJ6 765 aa10.2□□□□□ -0.78
USF1-204ENST00000472217 GALNT17Q6IS24 598 aa10.2□□□□□ -0.78
USF1-204ENST00000472217 RTN4RL1Q86UN2 441 aaPredicted RBP10.2□□□□□ -0.78
USF1-204ENST00000472217 ADGRA3Q8IWK6 1321 aa10.2□□□□□ -0.78
USF1-204ENST00000472217 FAM177A1Q8N128 213 aaPredicted RBP10.2□□□□□ -0.78
USF1-204ENST00000472217 FIBCD1Q8N539 461 aa10.2□□□□□ -0.78
USF1-204ENST00000472217 TMEM40Q8WWA1 233 aa10.2□□□□□ -0.78
USF1-204ENST00000472217 IL17RAQ96F46 866 aa10.2□□□□□ -0.78
USF1-204ENST00000472217 SAMD11Q96NU1 681 aa10.2□□□□□ -0.78
USF1-204ENST00000472217 PHF20Q9BVI0 1012 aa10.2□□□□□ -0.78
USF1-204ENST00000472217 TEKT3Q9BXF9 490 aa10.2□□□□□ -0.78
USF1-204ENST00000472217 FTHL17Q9BXU8 183 aa10.2□□□□□ -0.78
USF1-204ENST00000472217 UNC45AQ9H3U1 944 aa10.2□□□□□ -0.78
USF1-204ENST00000472217 CDHR5Q9HBB8 845 aa10.2□□□□□ -0.78
USF1-204ENST00000472217 RC3H2Q9HBD1 1191 aaKnown RBP10.2□□□□□ -0.78
USF1-204ENST00000472217 DISC1Q9NRI5 854 aa10.2□□□□□ -0.78
USF1-204ENST00000472217 GINS2Q9Y248 185 aa10.2□□□□□ -0.78
USF1-204ENST00000472217 PRRC2BQ5JSZ5 2229 aaKnown RBP10.19□□□□□ -0.78
USF1-204ENST00000472217 MYO9BQ13459 2157 aa10.19□□□□□ -0.78
USF1-204ENST00000472217 WDR81Q562E7 1941 aa10.19□□□□□ -0.78
USF1-204ENST00000472217 TRANK1O15050 2925 aa10.19□□□□□ -0.78
USF1-204ENST00000472217 CTDNEP1O95476 244 aa10.19□□□□□ -0.78
USF1-204ENST00000472217 OATP04181 439 aa10.19□□□□□ -0.78
USF1-204ENST00000472217 SFNP31947 248 aa10.19□□□□□ -0.78
USF1-204ENST00000472217 KCNQ1P51787 676 aa10.19□□□□□ -0.78
USF1-204ENST00000472217 JAK3P52333 1124 aa10.19□□□□□ -0.78
USF1-204ENST00000472217 PRKCEQ02156 737 aa10.19□□□□□ -0.78
USF1-204ENST00000472217 ANKRD1Q15327 319 aa10.19□□□□□ -0.78
USF1-204ENST00000472217 INF2Q27J81 1249 aa10.19□□□□□ -0.78
USF1-204ENST00000472217 KIZQ2M2Z5 673 aa10.19□□□□□ -0.78
USF1-204ENST00000472217 Q4G0T1 1027 aa10.19□□□□□ -0.78
USF1-204ENST00000472217 MOXD1Q6UVY6 613 aa10.19□□□□□ -0.78
USF1-204ENST00000472217 KRT25Q7Z3Z0 450 aa10.19□□□□□ -0.78
USF1-204ENST00000472217 TMEM192Q8IY95 271 aa10.19□□□□□ -0.78
USF1-204ENST00000472217 CRIPAKQ8N1N5 446 aa10.19□□□□□ -0.78
USF1-204ENST00000472217 METTL13Q8N6R0 699 aa10.19□□□□□ -0.78
USF1-204ENST00000472217 ETNPPLQ8TBG4 499 aa10.19□□□□□ -0.78
USF1-204ENST00000472217 ADAMTS19Q8TE59 1207 aa10.19□□□□□ -0.78
USF1-204ENST00000472217 ZNF689Q96CS4 500 aaPredicted RBP10.19□□□□□ -0.78
USF1-204ENST00000472217 FAM167AQ96KS9 214 aa10.19□□□□□ -0.78
USF1-204ENST00000472217 MBOAT7Q96N66 472 aa10.19□□□□□ -0.78
USF1-204ENST00000472217 PPP1R16BQ96T49 567 aa10.19□□□□□ -0.78
USF1-204ENST00000472217 TMX1Q9H3N1 280 aa10.19□□□□□ -0.78
USF1-204ENST00000472217 GJB4Q9NTQ9 266 aa10.19□□□□□ -0.78
USF1-204ENST00000472217 COG5Q9UP83 839 aa10.19□□□□□ -0.78
USF1-204ENST00000472217 NOC2LQ9Y3T9 749 aaKnown RBP10.19□□□□□ -0.78
USF1-204ENST00000472217 MYH9P35579 1960 aaKnown RBP10.19□□□□□ -0.78
USF1-204ENST00000472217 H3BNC9 293 aa10.18□□□□□ -0.78
USF1-204ENST00000472217 SLC37A4O43826 429 aa10.18□□□□□ -0.78
USF1-204ENST00000472217 RPS6KA5O75582 802 aa10.18□□□□□ -0.78
USF1-204ENST00000472217 DGKIO75912 1065 aa10.18□□□□□ -0.78
USF1-204ENST00000472217 LARGE1O95461 756 aa10.18□□□□□ -0.78
USF1-204ENST00000472217 SEC24BO95487 1268 aa10.18□□□□□ -0.78
USF1-204ENST00000472217 VTNP04004 478 aa10.18□□□□□ -0.78
USF1-204ENST00000472217 CENPBP07199 599 aaPredicted RBP10.18□□□□□ -0.78
USF1-204ENST00000472217 LINC00271P0C7V0 271 aa10.18□□□□□ -0.78
USF1-204ENST00000472217 FDPSP14324 419 aaKnown RBP10.18□□□□□ -0.78
USF1-204ENST00000472217 XBP1P17861 261 aa10.18□□□□□ -0.78
USF1-204ENST00000472217 CLCN3P51790 818 aa10.18□□□□□ -0.78
USF1-204ENST00000472217 NFX1Q12986 1120 aaKnown RBP10.18□□□□□ -0.78
USF1-204ENST00000472217 GPM6BQ13491 265 aa10.18□□□□□ -0.78
USF1-204ENST00000472217 BTG3Q14201 252 aaPredicted RBP10.18□□□□□ -0.78
USF1-204ENST00000472217 ME3Q16798 604 aa10.18□□□□□ -0.78
USF1-204ENST00000472217 AAK1Q2M2I8 961 aa10.18□□□□□ -0.78
USF1-204ENST00000472217 LETM2Q2VYF4 491 aa10.18□□□□□ -0.78
USF1-204ENST00000472217 B3GNT9Q6UX72 402 aa10.18□□□□□ -0.78
USF1-204ENST00000472217 MIER3Q7Z3K6 550 aa10.18□□□□□ -0.78
USF1-204ENST00000472217 NPAS4Q8IUM7 802 aa10.18□□□□□ -0.78
USF1-204ENST00000472217 LINC01465Q8N7H1 131 aa10.18□□□□□ -0.78
USF1-204ENST00000472217 NECAB1Q8N987 351 aa10.18□□□□□ -0.78
USF1-204ENST00000472217 IL27Q8NEV9 243 aa10.18□□□□□ -0.78
USF1-204ENST00000472217 OXER1Q8TDS5 423 aa10.18□□□□□ -0.78
USF1-204ENST00000472217 HLA-CQ95604 372 aa10.18□□□□□ -0.78
USF1-204ENST00000472217 MRPL38Q96DV4 380 aaKnown RBP10.18□□□□□ -0.78
USF1-204ENST00000472217 ERVK-5Q9HDB9 667 aa10.18□□□□□ -0.78
USF1-204ENST00000472217 ORC3Q9UBD5 711 aaPredicted RBP10.18□□□□□ -0.78
USF1-204ENST00000472217 DDX25Q9UHL0 483 aaKnown RBP10.18□□□□□ -0.78
USF1-204ENST00000472217 CEP131Q9UPN4 1083 aa10.18□□□□□ -0.78
USF1-204ENST00000472217 CUL9Q8IWT3 2517 aa10.18□□□□□ -0.78
USF1-204ENST00000472217 KIAA1671Q9BY89 1806 aa10.18□□□□□ -0.78
USF1-204ENST00000472217 PRUNE2Q8WUY3 3088 aa10.18□□□□□ -0.78
USF1-204ENST00000472217 TTC3P53804 2025 aa10.17□□□□□ -0.78
USF1-204ENST00000472217 CCDC194A0A1B0GVG4 234 aa10.17□□□□□ -0.78
USF1-204ENST00000472217 MAGEB2O15479 319 aa10.17□□□□□ -0.78
USF1-204ENST00000472217 MGEA5O60502 916 aa10.17□□□□□ -0.78
USF1-204ENST00000472217 GPR32O75388 356 aa10.17□□□□□ -0.78
USF1-204ENST00000472217 BMP1P13497 986 aa10.17□□□□□ -0.78
USF1-204ENST00000472217 CTNNB1P35222 781 aa10.17□□□□□ -0.78
USF1-204ENST00000472217 NEK4P51957 841 aa10.17□□□□□ -0.78
USF1-204ENST00000472217 CRYBB1P53674 252 aaPredicted RBP10.17□□□□□ -0.78
USF1-204ENST00000472217 PTPROQ16827 1216 aa10.17□□□□□ -0.78
USF1-204ENST00000472217 LRRC71Q8N4P6 559 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms