RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 ITGB4P16144 1822 aa14.96□□□□□ -0.02
NPHP4-207ENST00000470763 CES2O00748 559 aa14.95□□□□□ -0.02
NPHP4-207ENST00000470763 RGS16O15492 202 aaPredicted RBP14.95□□□□□ -0.02
NPHP4-207ENST00000470763 CYTH3O43739 400 aa14.95□□□□□ -0.02
NPHP4-207ENST00000470763 PPFIA2O75334 1257 aa14.95□□□□□ -0.02
NPHP4-207ENST00000470763 FGGP02679 453 aa14.95□□□□□ -0.02
NPHP4-207ENST00000470763 GOLGA8HP0CJ92 632 aa14.95□□□□□ -0.02
NPHP4-207ENST00000470763 ABL2P42684 1182 aa14.95□□□□□ -0.02
NPHP4-207ENST00000470763 PNMA1Q8ND90 353 aa14.95□□□□□ -0.02
NPHP4-207ENST00000470763 ZMYND12Q9H0C1 365 aa14.95□□□□□ -0.02
NPHP4-207ENST00000470763 SH3GLB2Q9NR46 395 aa14.95□□□□□ -0.02
NPHP4-207ENST00000470763 FAM114A2Q9NRY5 505 aa14.95□□□□□ -0.02
NPHP4-207ENST00000470763 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.95□□□□□ -0.02
NPHP4-207ENST00000470763 ZBTB48P10074 688 aaPredicted RBP14.95□□□□□ -0.02
NPHP4-207ENST00000470763 EPS15P42566 896 aa14.95□□□□□ -0.02
NPHP4-207ENST00000470763 PLTPP55058 493 aa14.95□□□□□ -0.02
NPHP4-207ENST00000470763 EIF3BP55884 814 aaKnown RBP14.95□□□□□ -0.02
NPHP4-207ENST00000470763 SLC27A3Q5K4L6 730 aa14.95□□□□□ -0.02
NPHP4-207ENST00000470763 ANKRD20A2Q5SQ80 823 aa14.95□□□□□ -0.02
NPHP4-207ENST00000470763 ANKRD20A1Q5TYW2 823 aa14.95□□□□□ -0.02
NPHP4-207ENST00000470763 ANKRD20A3Q5VUR7 823 aa14.95□□□□□ -0.02
NPHP4-207ENST00000470763 TRIM68Q6AZZ1 485 aa14.95□□□□□ -0.02
NPHP4-207ENST00000470763 TPCN2Q8NHX9 752 aa14.95□□□□□ -0.02
NPHP4-207ENST00000470763 DDX12PQ92771 950 aa14.95□□□□□ -0.02
NPHP4-207ENST00000470763 GLG1Q92896 1179 aa14.95□□□□□ -0.02
NPHP4-207ENST00000470763 RNF25Q96BH1 459 aaPredicted RBP14.95□□□□□ -0.02
NPHP4-207ENST00000470763 BRIP1Q9BX63 1249 aa14.95□□□□□ -0.02
NPHP4-207ENST00000470763 FGFBP2Q9BYJ0 223 aa14.95□□□□□ -0.02
NPHP4-207ENST00000470763 PNMA3Q9UL41 463 aa14.95□□□□□ -0.02
NPHP4-207ENST00000470763 POTEMA6NI47 508 aa14.95□□□□□ -0.02
NPHP4-207ENST00000470763 STXBP3O00186 592 aa14.95□□□□□ -0.02
NPHP4-207ENST00000470763 FGRP09769 529 aa14.95□□□□□ -0.02
NPHP4-207ENST00000470763 ALADP13716 330 aa14.95□□□□□ -0.02
NPHP4-207ENST00000470763 ZNF384Q8TF68 577 aa14.95□□□□□ -0.02
NPHP4-207ENST00000470763 AKT1S1Q96B36 256 aa14.95□□□□□ -0.02
NPHP4-207ENST00000470763 SLITRK6Q9H5Y7 841 aa14.95□□□□□ -0.02
NPHP4-207ENST00000470763 ICA1Q05084 483 aa14.94□□□□□ -0.02
NPHP4-207ENST00000470763 ADCY2Q08462 1091 aa14.94□□□□□ -0.02
NPHP4-207ENST00000470763 SNX1Q13596 522 aa14.94□□□□□ -0.02
NPHP4-207ENST00000470763 SLC29A2Q14542 456 aa14.94□□□□□ -0.02
NPHP4-207ENST00000470763 DENND2CQ68D51 928 aa14.94□□□□□ -0.02
NPHP4-207ENST00000470763 ALKBH5Q6P6C2 394 aaKnown RBP14.94□□□□□ -0.02
NPHP4-207ENST00000470763 KCNK18Q7Z418 384 aa14.94□□□□□ -0.02
NPHP4-207ENST00000470763 NEK9Q8TD19 979 aa14.94□□□□□ -0.02
NPHP4-207ENST00000470763 EPS8L3Q8TE67 593 aaKnown RBP14.94□□□□□ -0.02
NPHP4-207ENST00000470763 PNMA5Q96PV4 448 aa14.94□□□□□ -0.02
NPHP4-207ENST00000470763 ZBTB7AO95365 584 aa14.94□□□□□ -0.02
NPHP4-207ENST00000470763 LINGO3P0C6S8 592 aa14.94□□□□□ -0.02
NPHP4-207ENST00000470763 CCND1P24385 295 aa14.94□□□□□ -0.02
NPHP4-207ENST00000470763 PMS2P54278 862 aa14.94□□□□□ -0.02
NPHP4-207ENST00000470763 FKBP3Q00688 224 aaKnown RBP14.94□□□□□ -0.02
NPHP4-207ENST00000470763 NUDT12Q9BQG2 462 aa14.94□□□□□ -0.02
NPHP4-207ENST00000470763 SPON1Q9HCB6 807 aa14.94□□□□□ -0.02
NPHP4-207ENST00000470763 MLXIPLQ9NP71 852 aa14.94□□□□□ -0.02
NPHP4-207ENST00000470763 FGFR1OP2Q9NVK5 253 aa14.94□□□□□ -0.02
NPHP4-207ENST00000470763 AIPL1Q9NZN9 384 aa14.94□□□□□ -0.02
NPHP4-207ENST00000470763 SNX24Q9Y343 169 aa14.94□□□□□ -0.02
NPHP4-207ENST00000470763 KLHL33A6NCF5 533 aa14.93□□□□□ -0.02
NPHP4-207ENST00000470763 SNX3O60493 162 aa14.93□□□□□ -0.02
NPHP4-207ENST00000470763 NAPAP54920 295 aa14.93□□□□□ -0.02
NPHP4-207ENST00000470763 MYOCDQ8IZQ8 938 aa14.93□□□□□ -0.02
NPHP4-207ENST00000470763 TMOD3Q9NYL9 352 aa14.93□□□□□ -0.02
NPHP4-207ENST00000470763 NAGPAQ9UK23 515 aa14.93□□□□□ -0.02
NPHP4-207ENST00000470763 CORO1CQ9ULV4 474 aaPredicted RBP14.93□□□□□ -0.02
NPHP4-207ENST00000470763 PVALEFA0A1B0GWK0 134 aa14.93□□□□□ -0.02
NPHP4-207ENST00000470763 NONOQ15233 471 aaKnown RBP eCLIP14.93□□□□□ -0.02
NPHP4-207ENST00000470763 FBXO25Q8TCJ0 367 aa14.93□□□□□ -0.02
NPHP4-207ENST00000470763 DYDC1Q8WWB3 177 aa14.93□□□□□ -0.02
NPHP4-207ENST00000470763 PIGBQ92521 554 aa14.93□□□□□ -0.02
NPHP4-207ENST00000470763 TXLNGYQ9BZA5 131 aa14.93□□□□□ -0.02
NPHP4-207ENST00000470763 BARHL2Q9NY43 387 aa14.93□□□□□ -0.02
NPHP4-207ENST00000470763 STARD3NLO95772 234 aa14.93□□□□□ -0.02
NPHP4-207ENST00000470763 ATP2A2P16615 1042 aaKnown RBP14.93□□□□□ -0.02
NPHP4-207ENST00000470763 TFAP4Q01664 338 aa14.93□□□□□ -0.02
NPHP4-207ENST00000470763 CACNB1Q02641 598 aaPredicted RBP14.93□□□□□ -0.02
NPHP4-207ENST00000470763 CHRNDQ07001 517 aa14.93□□□□□ -0.02
NPHP4-207ENST00000470763 BLMHQ13867 455 aa14.93□□□□□ -0.02
NPHP4-207ENST00000470763 TAF11Q15544 211 aa14.93□□□□□ -0.02
NPHP4-207ENST00000470763 SEC14L1Q92503 715 aa14.93□□□□□ -0.02
NPHP4-207ENST00000470763 OSBPL1AQ9BXW6 950 aa14.93□□□□□ -0.02
NPHP4-207ENST00000470763 NSRP1Q9H0G5 558 aaKnown RBP14.93□□□□□ -0.02
NPHP4-207ENST00000470763 GANQ9H2C0 597 aa14.93□□□□□ -0.02
NPHP4-207ENST00000470763 PABPC3Q9H361 631 aaKnown RBP14.93□□□□□ -0.02
NPHP4-207ENST00000470763 ADAM22Q9P0K1 906 aa14.93□□□□□ -0.02
NPHP4-207ENST00000470763 MAD2L2Q9UI95 211 aa14.93□□□□□ -0.02
NPHP4-207ENST00000470763 DBR1Q9UK59 544 aaKnown RBP14.93□□□□□ -0.02
NPHP4-207ENST00000470763 CCDC169A6NNP5 214 aa14.92□□□□□ -0.02
NPHP4-207ENST00000470763 SLC9A1P19634 815 aa14.92□□□□□ -0.02
NPHP4-207ENST00000470763 MSH2P43246 934 aa14.92□□□□□ -0.02
NPHP4-207ENST00000470763 SLMAPQ14BN4 828 aa14.92□□□□□ -0.02
NPHP4-207ENST00000470763 IFI16Q16666 785 aaKnown RBP14.92□□□□□ -0.02
NPHP4-207ENST00000470763 OTUD6AQ7L8S5 288 aa14.92□□□□□ -0.02
NPHP4-207ENST00000470763 NEK8Q86SG6 692 aa14.92□□□□□ -0.02
NPHP4-207ENST00000470763 TBCKQ8TEA7 893 aa14.92□□□□□ -0.02
NPHP4-207ENST00000470763 SEMA4AQ9H3S1 761 aa14.92□□□□□ -0.02
NPHP4-207ENST00000470763 ERVK-5Q9HDB9 667 aa14.92□□□□□ -0.02
NPHP4-207ENST00000470763 DCP1AQ9NPI6 582 aaPredicted RBP14.92□□□□□ -0.02
NPHP4-207ENST00000470763 FGFR4P22455 802 aa14.92□□□□□ -0.02
NPHP4-207ENST00000470763 PTGER2P43116 358 aa14.92□□□□□ -0.02
NPHP4-207ENST00000470763 DR1Q01658 176 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms