RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 NPHP3-ACAD11A0A0J9YXS1 232 aa8.63□□□□□ -1.03
TPM3-215ENST00000469717 TSPY2A6NKD2 308 aa8.63□□□□□ -1.03
TPM3-215ENST00000469717 SNX3O60493 162 aa8.63□□□□□ -1.03
TPM3-215ENST00000469717 OR52Z1P0C646 297 aa8.63□□□□□ -1.03
TPM3-215ENST00000469717 GNAT1P11488 350 aa8.63□□□□□ -1.03
TPM3-215ENST00000469717 ATP4AP20648 1035 aa8.63□□□□□ -1.03
TPM3-215ENST00000469717 RIPK1Q13546 671 aa8.63□□□□□ -1.03
TPM3-215ENST00000469717 ARMC9Q7Z3E5 817 aa8.63□□□□□ -1.03
TPM3-215ENST00000469717 ANKLE1Q8NAG6 615 aa8.63□□□□□ -1.03
TPM3-215ENST00000469717 FAM210AQ96ND0 272 aa8.63□□□□□ -1.03
TPM3-215ENST00000469717 TMEM237Q96Q45 408 aa8.63□□□□□ -1.03
TPM3-215ENST00000469717 BATF3Q9NR55 127 aa8.63□□□□□ -1.03
TPM3-215ENST00000469717 TMEM260Q9NX78 707 aa8.63□□□□□ -1.03
TPM3-215ENST00000469717 CPSF2Q9P2I0 782 aaKnown RBP8.63□□□□□ -1.03
TPM3-215ENST00000469717 CTNNAL1Q9UBT7 734 aa8.63□□□□□ -1.03
TPM3-215ENST00000469717 TNS3Q68CZ2 1445 aa8.63□□□□□ -1.03
TPM3-215ENST00000469717 USP17L3A6NCW0 530 aa8.63□□□□□ -1.03
TPM3-215ENST00000469717 USP17L4A6NCW7 530 aa8.63□□□□□ -1.03
TPM3-215ENST00000469717 RGS16O15492 202 aaPredicted RBP8.63□□□□□ -1.03
TPM3-215ENST00000469717 MSH2P43246 934 aa8.63□□□□□ -1.03
TPM3-215ENST00000469717 ECM1Q16610 540 aa8.63□□□□□ -1.03
TPM3-215ENST00000469717 FAM47EQ6ZV65 393 aa8.63□□□□□ -1.03
TPM3-215ENST00000469717 USP17L1Q7RTZ2 530 aa8.63□□□□□ -1.03
TPM3-215ENST00000469717 UTP4Q969X6 686 aaKnown RBP8.63□□□□□ -1.03
TPM3-215ENST00000469717 GJD4Q96KN9 370 aaPredicted RBP8.63□□□□□ -1.03
TPM3-215ENST00000469717 ZMYND12Q9H0C1 365 aa8.63□□□□□ -1.03
TPM3-215ENST00000469717 VAT1LQ9HCJ6 419 aa8.63□□□□□ -1.03
TPM3-215ENST00000469717 CCDC87Q9NVE4 849 aa8.63□□□□□ -1.03
TPM3-215ENST00000469717 DNAJC17Q9NVM6 304 aaKnown RBP8.63□□□□□ -1.03
TPM3-215ENST00000469717 ARPP21Q9UBL0 812 aaPredicted RBP8.63□□□□□ -1.03
TPM3-215ENST00000469717 DUOX1Q9NRD9 1551 aa8.62□□□□□ -1.03
TPM3-215ENST00000469717 DDAH1O94760 285 aa8.62□□□□□ -1.03
TPM3-215ENST00000469717 ALADP13716 330 aa8.62□□□□□ -1.03
TPM3-215ENST00000469717 GM2AP17900 193 aa8.62□□□□□ -1.03
TPM3-215ENST00000469717 MGAT5Q09328 741 aa8.62□□□□□ -1.03
TPM3-215ENST00000469717 MTMR3Q13615 1198 aa8.62□□□□□ -1.03
TPM3-215ENST00000469717 PPP2R5BQ15173 497 aa8.62□□□□□ -1.03
TPM3-215ENST00000469717 ASIC2Q16515 512 aa8.62□□□□□ -1.03
TPM3-215ENST00000469717 NUGGCQ68CJ6 796 aa8.62□□□□□ -1.03
TPM3-215ENST00000469717 GIGYF2Q6Y7W6 1299 aaKnown RBP8.62□□□□□ -1.03
TPM3-215ENST00000469717 CCDC25Q86WR0 208 aa8.62□□□□□ -1.03
TPM3-215ENST00000469717 TPCN2Q8NHX9 752 aa8.62□□□□□ -1.03
TPM3-215ENST00000469717 RBM46Q8TBY0 533 aaKnown RBP8.62□□□□□ -1.03
TPM3-215ENST00000469717 ACTRT1Q8TDG2 376 aa8.62□□□□□ -1.03
TPM3-215ENST00000469717 SH3RF3Q8TEJ3 882 aaPredicted RBP8.62□□□□□ -1.03
TPM3-215ENST00000469717 DDX12PQ92771 950 aa8.62□□□□□ -1.03
TPM3-215ENST00000469717 DYNLL2Q96FJ2 89 aa8.62□□□□□ -1.03
TPM3-215ENST00000469717 PNMA5Q96PV4 448 aa8.62□□□□□ -1.03
TPM3-215ENST00000469717 SYT15Q9BQS2 421 aa8.62□□□□□ -1.03
TPM3-215ENST00000469717 ZFATQ9P243 1243 aa8.62□□□□□ -1.03
TPM3-215ENST00000469717 CORO1CQ9ULV4 474 aaPredicted RBP8.62□□□□□ -1.03
TPM3-215ENST00000469717 ATF5Q9Y2D1 282 aaPredicted RBP8.62□□□□□ -1.03
TPM3-215ENST00000469717 UTP11Q9Y3A2 253 aaKnown RBP8.62□□□□□ -1.03
TPM3-215ENST00000469717 BHMG1C9JSJ3 638 aaPredicted RBP8.62□□□□□ -1.03
TPM3-215ENST00000469717 ASAP2O43150 1006 aa8.62□□□□□ -1.03
TPM3-215ENST00000469717 PYGLP06737 847 aa8.62□□□□□ -1.03
TPM3-215ENST00000469717 ATP2A2P16615 1042 aaKnown RBP8.62□□□□□ -1.03
TPM3-215ENST00000469717 ABCB4P21439 1286 aa8.62□□□□□ -1.03
TPM3-215ENST00000469717 CRKLP46109 303 aaKnown RBP8.62□□□□□ -1.03
TPM3-215ENST00000469717 ANO7Q6IWH7 933 aa8.62□□□□□ -1.03
TPM3-215ENST00000469717 ALKBH5Q6P6C2 394 aaKnown RBP8.62□□□□□ -1.03
TPM3-215ENST00000469717 TPTE2Q6XPS3 522 aa8.62□□□□□ -1.03
TPM3-215ENST00000469717 PHC3Q8NDX5 983 aa8.62□□□□□ -1.03
TPM3-215ENST00000469717 NAF1Q96HR8 494 aaKnown RBP8.62□□□□□ -1.03
TPM3-215ENST00000469717 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.62□□□□□ -1.034e-7■■■□□ 17.2
TPM3-215ENST00000469717 TMOD4Q9NZQ9 345 aa8.62□□□□□ -1.03
TPM3-215ENST00000469717 BIN2Q9UBW5 565 aaPredicted RBP8.62□□□□□ -1.03
TPM3-215ENST00000469717 IGSF9BQ9UPX0 1349 aa8.62□□□□□ -1.03
TPM3-215ENST00000469717 ANKRD33BA6NCL7 494 aa8.62□□□□□ -1.03
TPM3-215ENST00000469717 PPFIA2O75334 1257 aa8.62□□□□□ -1.03
TPM3-215ENST00000469717 PECAM1P16284 738 aaPredicted RBP8.62□□□□□ -1.03
TPM3-215ENST00000469717 PMS2P54278 862 aa8.62□□□□□ -1.03
TPM3-215ENST00000469717 POU5F1Q01860 360 aaKnown RBP8.62□□□□□ -1.03
TPM3-215ENST00000469717 LONRF1Q17RB8 773 aa8.62□□□□□ -1.03
TPM3-215ENST00000469717 SV2BQ7L1I2 683 aa8.62□□□□□ -1.03
TPM3-215ENST00000469717 SLC44A5Q8NCS7 719 aa8.62□□□□□ -1.03
TPM3-215ENST00000469717 DYDC1Q8WWB3 177 aa8.62□□□□□ -1.03
TPM3-215ENST00000469717 P3H4Q92791 437 aa8.62□□□□□ -1.03
TPM3-215ENST00000469717 C18orf8Q96DM3 657 aa8.62□□□□□ -1.03
TPM3-215ENST00000469717 TXLNGYQ9BZA5 131 aa8.62□□□□□ -1.03
TPM3-215ENST00000469717 ZDHHC18Q9NUE0 388 aa8.62□□□□□ -1.03
TPM3-215ENST00000469717 NAGPAQ9UK23 515 aa8.62□□□□□ -1.03
TPM3-215ENST00000469717 PPP1R9AQ9ULJ8 1098 aa8.62□□□□□ -1.03
TPM3-215ENST00000469717 G3BP2Q9UN86 482 aaKnown RBP8.62□□□□□ -1.03
TPM3-215ENST00000469717 COL4A3BPQ9Y5P4 624 aa8.62□□□□□ -1.03
TPM3-215ENST00000469717 RPTORQ8N122 1335 aa8.61□□□□□ -1.03
TPM3-215ENST00000469717 CCDC88AQ3V6T2 1871 aa8.61□□□□□ -1.03
TPM3-215ENST00000469717 A6NHS1 94 aa8.61□□□□□ -1.03
TPM3-215ENST00000469717 ANKRD63C9JTQ0 380 aa8.61□□□□□ -1.03
TPM3-215ENST00000469717 SMIM24O75264 130 aa8.61□□□□□ -1.03
TPM3-215ENST00000469717 GSTA1P08263 222 aa8.61□□□□□ -1.03
TPM3-215ENST00000469717 CALM1P0DP23 149 aa8.61□□□□□ -1.03
TPM3-215ENST00000469717 CALM2P0DP24 149 aa8.61□□□□□ -1.03
TPM3-215ENST00000469717 CALM3P0DP25 149 aa8.61□□□□□ -1.03
TPM3-215ENST00000469717 CALML3P27482 149 aa8.61□□□□□ -1.03
TPM3-215ENST00000469717 COPS2P61201 443 aa8.61□□□□□ -1.03
TPM3-215ENST00000469717 PSMD2Q13200 908 aa8.61□□□□□ -1.03
TPM3-215ENST00000469717 ITIH4Q14624 930 aa8.61□□□□□ -1.03
TPM3-215ENST00000469717 RNF220Q5VTB9 566 aa8.61□□□□□ -1.03
TPM3-215ENST00000469717 DENND2CQ68D51 928 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms