RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 HAUS2Q9NVX0 235 aa14.16□□□□□ -0.14
PDZRN3-205ENST00000466780 TRAF3IP3Q9Y228 551 aa14.16□□□□□ -0.14
PDZRN3-205ENST00000466780 COL24A1Q17RW2 1714 aa14.15□□□□□ -0.14
PDZRN3-205ENST00000466780 POTEFA5A3E0 1075 aa14.15□□□□□ -0.14
PDZRN3-205ENST00000466780 F8W031 263 aaPredicted RBP14.15□□□□□ -0.14
PDZRN3-205ENST00000466780 POTEIP0CG38 1075 aa14.15□□□□□ -0.14
PDZRN3-205ENST00000466780 JAM2P57087 298 aa14.15□□□□□ -0.14
PDZRN3-205ENST00000466780 CHADLQ6NUI6 762 aa14.15□□□□□ -0.14
PDZRN3-205ENST00000466780 POTEGQ6S5H5 508 aa14.15□□□□□ -0.14
PDZRN3-205ENST00000466780 POTEEQ6S8J3 1075 aa14.15□□□□□ -0.14
PDZRN3-205ENST00000466780 DAAM2Q86T65 1068 aa14.15□□□□□ -0.14
PDZRN3-205ENST00000466780 CACNA2D3Q8IZS8 1091 aa14.15□□□□□ -0.14
PDZRN3-205ENST00000466780 MDM1Q8TC05 714 aa14.15□□□□□ -0.14
PDZRN3-205ENST00000466780 ARHGEF1Q92888 912 aaKnown RBP14.15□□□□□ -0.14
PDZRN3-205ENST00000466780 TLCD1Q96CP7 247 aa14.15□□□□□ -0.14
PDZRN3-205ENST00000466780 DHX36Q9H2U1 1008 aaKnown RBP14.15□□□□□ -0.14
PDZRN3-205ENST00000466780 TNRC6CQ9HCJ0 1690 aaKnown RBP14.15□□□□□ -0.14
PDZRN3-205ENST00000466780 A0A0A6YYK5 440 aaPredicted RBP14.15□□□□□ -0.14
PDZRN3-205ENST00000466780 AKAP3O75969 853 aa14.15□□□□□ -0.14
PDZRN3-205ENST00000466780 KRT18P05783 430 aaKnown RBP14.15□□□□□ -0.14
PDZRN3-205ENST00000466780 AKR1B1P15121 316 aa14.15□□□□□ -0.14
PDZRN3-205ENST00000466780 GCFC2P16383 781 aaKnown RBP14.15□□□□□ -0.14
PDZRN3-205ENST00000466780 SCTRP47872 440 aa14.15□□□□□ -0.14
PDZRN3-205ENST00000466780 LACTB2Q53H82 288 aaPredicted RBP14.15□□□□□ -0.14
PDZRN3-205ENST00000466780 ZNF804AQ7Z570 1209 aa14.15□□□□□ -0.14
PDZRN3-205ENST00000466780 CCDC26Q8TAB7 109 aa14.15□□□□□ -0.14
PDZRN3-205ENST00000466780 CUL5Q93034 780 aa14.15□□□□□ -0.14
PDZRN3-205ENST00000466780 ATF5Q9Y2D1 282 aaPredicted RBP14.15□□□□□ -0.14
PDZRN3-205ENST00000466780 PLIN4Q96Q06 1357 aa14.15□□□□□ -0.14
PDZRN3-205ENST00000466780 PITPNM2Q9BZ72 1349 aa14.15□□□□□ -0.14
PDZRN3-205ENST00000466780 RGL2O15211 777 aa14.14□□□□□ -0.15
PDZRN3-205ENST00000466780 PPFIA2O75334 1257 aa14.14□□□□□ -0.15
PDZRN3-205ENST00000466780 CCDC172P0C7W6 258 aa14.14□□□□□ -0.15
PDZRN3-205ENST00000466780 RFC4P35249 363 aa14.14□□□□□ -0.15
PDZRN3-205ENST00000466780 SLC16A2P36021 539 aa14.14□□□□□ -0.15
PDZRN3-205ENST00000466780 ZNF543Q08ER8 600 aa14.14□□□□□ -0.15
PDZRN3-205ENST00000466780 DCAF17Q5H9S7 520 aaPredicted RBP14.14□□□□□ -0.15
PDZRN3-205ENST00000466780 EPM2AIP1Q7L775 607 aaPredicted RBP14.14□□□□□ -0.15
PDZRN3-205ENST00000466780 U2AF1L4Q8WU68 220 aaKnown RBP14.14□□□□□ -0.15
PDZRN3-205ENST00000466780 PSMD1Q99460 953 aa14.14□□□□□ -0.15
PDZRN3-205ENST00000466780 TRIM31Q9BZY9 425 aa14.14□□□□□ -0.15
PDZRN3-205ENST00000466780 FAM114A2Q9NRY5 505 aa14.14□□□□□ -0.15
PDZRN3-205ENST00000466780 ATP8B3O60423 1300 aa14.14□□□□□ -0.15
PDZRN3-205ENST00000466780 IGKV6D-41A0A0C4DH26 115 aa14.14□□□□□ -0.15
PDZRN3-205ENST00000466780 FGGP02679 453 aa14.14□□□□□ -0.15
PDZRN3-205ENST00000466780 XRCC5P13010 732 aaKnown RBP14.14□□□□□ -0.15
PDZRN3-205ENST00000466780 CASP4P49662 377 aa14.14□□□□□ -0.15
PDZRN3-205ENST00000466780 PSMC6P62333 389 aa14.14□□□□□ -0.15
PDZRN3-205ENST00000466780 GIT2Q14161 759 aa14.14□□□□□ -0.15
PDZRN3-205ENST00000466780 KNOP1Q1ED39 458 aaKnown RBP14.14□□□□□ -0.15
PDZRN3-205ENST00000466780 WLSQ5T9L3 541 aa14.14□□□□□ -0.15
PDZRN3-205ENST00000466780 DCAF12L1Q5VU92 463 aa14.14□□□□□ -0.15
PDZRN3-205ENST00000466780 SFR1Q86XK3 245 aa14.14□□□□□ -0.15
PDZRN3-205ENST00000466780 PARP9Q8IXQ6 854 aa14.14□□□□□ -0.15
PDZRN3-205ENST00000466780 LNX1Q8TBB1 728 aaPredicted RBP14.14□□□□□ -0.15
PDZRN3-205ENST00000466780 LMBR1Q8WVP7 490 aa14.14□□□□□ -0.15
PDZRN3-205ENST00000466780 CCT6BQ92526 530 aa14.14□□□□□ -0.15
PDZRN3-205ENST00000466780 SGSM3Q96HU1 749 aa14.14□□□□□ -0.15
PDZRN3-205ENST00000466780 EPB41L4BQ9H329 900 aa14.14□□□□□ -0.15
PDZRN3-205ENST00000466780 KCNMB3Q9NPA1 279 aa14.14□□□□□ -0.15
PDZRN3-205ENST00000466780 OSGEPQ9NPF4 335 aa14.14□□□□□ -0.15
PDZRN3-205ENST00000466780 MCM8Q9UJA3 840 aa14.14□□□□□ -0.15
PDZRN3-205ENST00000466780 ATP2C2O75185 946 aa14.14□□□□□ -0.15
PDZRN3-205ENST00000466780 ANXA13P27216 316 aa14.14□□□□□ -0.15
PDZRN3-205ENST00000466780 RDXP35241 583 aaKnown RBP14.14□□□□□ -0.15
PDZRN3-205ENST00000466780 CDR1P51861 262 aa14.14□□□□□ -0.15
PDZRN3-205ENST00000466780 MRPL12P52815 198 aaKnown RBP14.14□□□□□ -0.15
PDZRN3-205ENST00000466780 GALCP54803 685 aa14.14□□□□□ -0.15
PDZRN3-205ENST00000466780 RC3H1Q5TC82 1133 aaKnown RBP14.14□□□□□ -0.15
PDZRN3-205ENST00000466780 BCAS3Q9H6U6 928 aa14.14□□□□□ -0.15
PDZRN3-205ENST00000466780 PSTPIP2Q9H939 334 aa14.14□□□□□ -0.15
PDZRN3-205ENST00000466780 TPX2Q9ULW0 747 aaKnown RBP14.14□□□□□ -0.15
PDZRN3-205ENST00000466780 ATP8A1Q9Y2Q0 1164 aa14.14□□□□□ -0.15
PDZRN3-205ENST00000466780 UTP11Q9Y3A2 253 aaKnown RBP14.14□□□□□ -0.15
PDZRN3-205ENST00000466780 USP17L15C9J2P7 530 aa14.13□□□□□ -0.15
PDZRN3-205ENST00000466780 USP17L10C9JJH3 530 aa14.13□□□□□ -0.15
PDZRN3-205ENST00000466780 USP17L13C9JLJ4 530 aa14.13□□□□□ -0.15
PDZRN3-205ENST00000466780 USP17L11C9JVI0 530 aa14.13□□□□□ -0.15
PDZRN3-205ENST00000466780 USP17L18D6R9N7 530 aa14.13□□□□□ -0.15
PDZRN3-205ENST00000466780 USP17L22D6RA61 530 aa14.13□□□□□ -0.15
PDZRN3-205ENST00000466780 USP17L17D6RBQ6 530 aa14.13□□□□□ -0.15
PDZRN3-205ENST00000466780 USP17L19D6RCP7 530 aa14.13□□□□□ -0.15
PDZRN3-205ENST00000466780 USP17L20D6RJB6 530 aa14.13□□□□□ -0.15
PDZRN3-205ENST00000466780 DDX3YO15523 660 aaKnown RBP14.13□□□□□ -0.15
PDZRN3-205ENST00000466780 BUB1BO60566 1050 aaPredicted RBP14.13□□□□□ -0.15
PDZRN3-205ENST00000466780 CAND2O75155 1236 aa14.13□□□□□ -0.15
PDZRN3-205ENST00000466780 SHBGP04278 402 aa14.13□□□□□ -0.15
PDZRN3-205ENST00000466780 NPEPPSP55786 919 aa14.13□□□□□ -0.15
PDZRN3-205ENST00000466780 USP17L24Q0WX57 530 aa14.13□□□□□ -0.15
PDZRN3-205ENST00000466780 SNCBQ16143 134 aa14.13□□□□□ -0.15
PDZRN3-205ENST00000466780 ERMARDQ5T6L9 678 aa14.13□□□□□ -0.15
PDZRN3-205ENST00000466780 GKAP1Q5VSY0 366 aaPredicted RBP14.13□□□□□ -0.15
PDZRN3-205ENST00000466780 USP17L6PQ6QN14 398 aa14.13□□□□□ -0.15
PDZRN3-205ENST00000466780 DPP8Q6V1X1 898 aaPredicted RBP14.13□□□□□ -0.15
PDZRN3-205ENST00000466780 SYCE1Q8N0S2 351 aa14.13□□□□□ -0.15
PDZRN3-205ENST00000466780 SLC35C1Q96A29 364 aa14.13□□□□□ -0.15
PDZRN3-205ENST00000466780 XPO6Q96QU8 1125 aaKnown RBP14.13□□□□□ -0.15
PDZRN3-205ENST00000466780 CD209Q9NNX6 404 aa14.13□□□□□ -0.15
PDZRN3-205ENST00000466780 PNMA2Q9UL42 364 aa14.13□□□□□ -0.15
PDZRN3-205ENST00000466780 INTUQ9ULD6 942 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms