RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 XBP1P17861 261 aa21.38■■□□□ 1.01
COL5A1-203ENST00000460264 CD52P31358 61 aa21.38■■□□□ 1.01
COL5A1-203ENST00000460264 INF2Q27J81 1249 aa21.38■■□□□ 1.01
COL5A1-203ENST00000460264 KRT40Q6A162 431 aa21.38■■□□□ 1.01
COL5A1-203ENST00000460264 NME8Q8N427 588 aa21.38■■□□□ 1.01
COL5A1-203ENST00000460264 GDPD5Q8WTR4 605 aa21.38■■□□□ 1.01
COL5A1-203ENST00000460264 YME1L1Q96TA2 773 aa21.38■■□□□ 1.01
COL5A1-203ENST00000460264 CELF4Q9BZC1 486 aaKnown RBP21.38■■□□□ 1.01
COL5A1-203ENST00000460264 UNC45AQ9H3U1 944 aa21.38■■□□□ 1.01
COL5A1-203ENST00000460264 CHMP2AO43633 222 aa21.37■■□□□ 1.01
COL5A1-203ENST00000460264 ZNF862O60290 1169 aa21.37■■□□□ 1.01
COL5A1-203ENST00000460264 SFNP31947 248 aa21.37■■□□□ 1.01
COL5A1-203ENST00000460264 JAK3P52333 1124 aa21.37■■□□□ 1.01
COL5A1-203ENST00000460264 KIAA0319LQ8IZA0 1049 aa21.37■■□□□ 1.01
COL5A1-203ENST00000460264 ETNPPLQ8TBG4 499 aa21.37■■□□□ 1.01
COL5A1-203ENST00000460264 WASF1Q92558 559 aa21.37■■□□□ 1.01
COL5A1-203ENST00000460264 FAM167AQ96KS9 214 aa21.37■■□□□ 1.01
COL5A1-203ENST00000460264 COL25A1Q9BXS0 654 aaPredicted RBP21.37■■□□□ 1.01
COL5A1-203ENST00000460264 CCDC194A0A1B0GVG4 234 aa21.36■■□□□ 1.01
COL5A1-203ENST00000460264 FDPSP14324 419 aaKnown RBP21.36■■□□□ 1.01
COL5A1-203ENST00000460264 UGCGQ16739 394 aa21.36■■□□□ 1.01
COL5A1-203ENST00000460264 TRMT1LQ7Z2T5 733 aaKnown RBP21.36■■□□□ 1.01
COL5A1-203ENST00000460264 OXER1Q8TDS5 423 aa21.36■■□□□ 1.01
COL5A1-203ENST00000460264 LINC01599Q8WXQ3 324 aa21.36■■□□□ 1.01
COL5A1-203ENST00000460264 C17orf80Q9BSJ5 609 aa21.36■■□□□ 1.01
COL5A1-203ENST00000460264 SUGCTQ9HAC7 445 aa21.36■■□□□ 1.01
COL5A1-203ENST00000460264 THEGQ9P2T0 379 aa21.36■■□□□ 1.01
COL5A1-203ENST00000460264 DDX25Q9UHL0 483 aaKnown RBP21.36■■□□□ 1.01
COL5A1-203ENST00000460264 ENPP3O14638 875 aa21.35■■□□□ 1.01
COL5A1-203ENST00000460264 SLC37A4O43826 429 aa21.35■■□□□ 1.01
COL5A1-203ENST00000460264 OATP04181 439 aa21.35■■□□□ 1.01
COL5A1-203ENST00000460264 PRKCEQ02156 737 aa21.35■■□□□ 1.01
COL5A1-203ENST00000460264 PAK2Q13177 524 aa21.35■■□□□ 1.01
COL5A1-203ENST00000460264 B3GNT9Q6UX72 402 aa21.35■■□□□ 1.01
COL5A1-203ENST00000460264 NEK8Q86SG6 692 aa21.35■■□□□ 1.01
COL5A1-203ENST00000460264 NSUN7Q8NE18 718 aaKnown RBP21.35■■□□□ 1.01
COL5A1-203ENST00000460264 RDM1Q8NG50 284 aa21.35■■□□□ 1.01
COL5A1-203ENST00000460264 PADI3Q9ULW8 664 aa21.35■■□□□ 1.01
COL5A1-203ENST00000460264 CEP131Q9UPN4 1083 aa21.35■■□□□ 1.01
COL5A1-203ENST00000460264 LETM2Q2VYF4 491 aa21.34■■□□□ 1.01
COL5A1-203ENST00000460264 MIER3Q7Z3K6 550 aa21.34■■□□□ 1.01
COL5A1-203ENST00000460264 FTHL17Q9BXU8 183 aa21.34■■□□□ 1.01
COL5A1-203ENST00000460264 GINS2Q9Y248 185 aa21.34■■□□□ 1.01
COL5A1-203ENST00000460264 VCANP13611 3396 aa21.34■■□□□ 1.01
COL5A1-203ENST00000460264 TTC28Q96AY4 2481 aa21.33■■□□□ 1.01
COL5A1-203ENST00000460264 GCFC2P16383 781 aaKnown RBP21.33■■□□□ 1.01
COL5A1-203ENST00000460264 ST3GAL1Q11201 340 aa21.33■■□□□ 1.01
COL5A1-203ENST00000460264 PIK3AP1Q6ZUJ8 805 aa21.33■■□□□ 1.01
COL5A1-203ENST00000460264 METTL13Q8N6R0 699 aa21.33■■□□□ 1.01
COL5A1-203ENST00000460264 FBXO22Q8NEZ5 403 aa21.33■■□□□ 1.01
COL5A1-203ENST00000460264 TSPYL2Q9H2G4 693 aaPredicted RBP21.33■■□□□ 1.01
COL5A1-203ENST00000460264 CDHR5Q9HBB8 845 aa21.33■■□□□ 1.01
COL5A1-203ENST00000460264 RC3H2Q9HBD1 1191 aaKnown RBP21.33■■□□□ 1.01
COL5A1-203ENST00000460264 KIAA1671Q9BY89 1806 aa21.33■■□□□ 1.01
COL5A1-203ENST00000460264 MAGEB2O15479 319 aa21.32■■□□□ 1
COL5A1-203ENST00000460264 JAK2O60674 1132 aa21.32■■□□□ 1
COL5A1-203ENST00000460264 CLCN3P51790 818 aa21.32■■□□□ 1
COL5A1-203ENST00000460264 TMEM266Q2M3C6 531 aa21.32■■□□□ 1
COL5A1-203ENST00000460264 C8orf34Q49A92 452 aa21.32■■□□□ 1
COL5A1-203ENST00000460264 EPC2Q52LR7 807 aa21.32■■□□□ 1
COL5A1-203ENST00000460264 EARS2Q5JPH6 523 aaKnown RBP21.32■■□□□ 1
COL5A1-203ENST00000460264 PPP4R3AQ6IN85 833 aa21.32■■□□□ 1
COL5A1-203ENST00000460264 RTN4RL1Q86UN2 441 aaPredicted RBP21.32■■□□□ 1
COL5A1-203ENST00000460264 LINC01465Q8N7H1 131 aa21.32■■□□□ 1
COL5A1-203ENST00000460264 TMEM40Q8WWA1 233 aa21.32■■□□□ 1
COL5A1-203ENST00000460264 ATXN2LQ8WWM7 1075 aaKnown RBP21.32■■□□□ 1
COL5A1-203ENST00000460264 SAMD11Q96NU1 681 aa21.32■■□□□ 1
COL5A1-203ENST00000460264 PPP1R16BQ96T49 567 aa21.32■■□□□ 1
COL5A1-203ENST00000460264 TMX1Q9H3N1 280 aa21.32■■□□□ 1
COL5A1-203ENST00000460264 ERVK-5Q9HDB9 667 aa21.32■■□□□ 1
COL5A1-203ENST00000460264 KCNMB3Q9NPA1 279 aa21.32■■□□□ 1
COL5A1-203ENST00000460264 NRBP2Q9NSY0 501 aa21.32■■□□□ 1
COL5A1-203ENST00000460264 LMCD1Q9NZU5 365 aa21.32■■□□□ 1
COL5A1-203ENST00000460264 ADGRA3Q8IWK6 1321 aa21.31■■□□□ 1
COL5A1-203ENST00000460264 ATG2AQ2TAZ0 1938 aa21.31■■□□□ 1
COL5A1-203ENST00000460264 FAM205CA6NFA0 338 aa21.31■■□□□ 1
COL5A1-203ENST00000460264 VTNP04004 478 aa21.31■■□□□ 1
COL5A1-203ENST00000460264 KRT2P35908 639 aa21.31■■□□□ 1
COL5A1-203ENST00000460264 NR5A1Q13285 461 aa21.31■■□□□ 1
COL5A1-203ENST00000460264 KIZQ2M2Z5 673 aa21.31■■□□□ 1
COL5A1-203ENST00000460264 TJAP1Q5JTD0 557 aa21.31■■□□□ 1
COL5A1-203ENST00000460264 CRIPAKQ8N1N5 446 aa21.31■■□□□ 1
COL5A1-203ENST00000460264 TNFRSF25Q93038 417 aa21.31■■□□□ 1
COL5A1-203ENST00000460264 VAV3Q9UKW4 847 aa21.31■■□□□ 1
COL5A1-203ENST00000460264 NOC2LQ9Y3T9 749 aaKnown RBP21.31■■□□□ 1
COL5A1-203ENST00000460264 CCNT1O60563 726 aaKnown RBP21.3■■□□□ 1
COL5A1-203ENST00000460264 GPR32O75388 356 aa21.3■■□□□ 1
COL5A1-203ENST00000460264 SKIV2LQ15477 1246 aaKnown RBP21.3■■□□□ 1
COL5A1-203ENST00000460264 EFCAB12Q6NXP0 572 aa21.3■■□□□ 1
COL5A1-203ENST00000460264 TMEM192Q8IY95 271 aa21.3■■□□□ 1
COL5A1-203ENST00000460264 FAM20AQ96MK3 541 aa21.3■■□□□ 1
COL5A1-203ENST00000460264 OSMRQ99650 979 aa21.3■■□□□ 1
COL5A1-203ENST00000460264 NAP1L4Q99733 375 aaKnown RBP21.3■■□□□ 1
COL5A1-203ENST00000460264 BRMS1Q9HCU9 246 aa21.3■■□□□ 1
COL5A1-203ENST00000460264 BRWD1Q9NSI6 2320 aa21.3■■□□□ 1
COL5A1-203ENST00000460264 RPS6KA5O75582 802 aa21.29■■□□□ 1
COL5A1-203ENST00000460264 DGKIO75912 1065 aa21.29■■□□□ 1
COL5A1-203ENST00000460264 STBD1O95210 358 aa21.29■■□□□ 1
COL5A1-203ENST00000460264 LINC00271P0C7V0 271 aa21.29■■□□□ 1
COL5A1-203ENST00000460264 CRYBB1P53674 252 aaPredicted RBP21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms