RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 CEP72Q9P209 647 aa16.25■□□□□ 0.19
SF1-211ENST00000448404 HYOU1Q9Y4L1 999 aa16.25■□□□□ 0.19
SF1-211ENST00000448404 C10orf71Q711Q0 1435 aa16.25■□□□□ 0.19
SF1-211ENST00000448404 PALMO75781 387 aa16.25■□□□□ 0.19
SF1-211ENST00000448404 TNNT3P45378 269 aaPredicted RBP16.25■□□□□ 0.19
SF1-211ENST00000448404 FAM193AP78312 1265 aa16.25■□□□□ 0.19
SF1-211ENST00000448404 PPARDQ03181 441 aa16.25■□□□□ 0.19
SF1-211ENST00000448404 KIAA0753Q2KHM9 967 aa16.25■□□□□ 0.19
SF1-211ENST00000448404 ODR4Q5SWX8 454 aa16.25■□□□□ 0.19
SF1-211ENST00000448404 DPY19L2P1Q6NXN4 242 aa16.25■□□□□ 0.19
SF1-211ENST00000448404 MOXD1Q6UVY6 613 aa16.25■□□□□ 0.19
SF1-211ENST00000448404 TAAR1Q96RJ0 339 aa16.25■□□□□ 0.19
SF1-211ENST00000448404 NAP1L4Q99733 375 aaKnown RBP16.25■□□□□ 0.19
SF1-211ENST00000448404 CHORDC1Q9UHD1 332 aaPredicted RBP16.25■□□□□ 0.19
SF1-211ENST00000448404 PGAP2Q9UHJ9 254 aa16.25■□□□□ 0.19
SF1-211ENST00000448404 RIPK3Q9Y572 518 aa16.25■□□□□ 0.19
SF1-211ENST00000448404 PIK3CDO00329 1044 aa16.24■□□□□ 0.19
SF1-211ENST00000448404 TBX3O15119 743 aa16.24■□□□□ 0.19
SF1-211ENST00000448404 ATP9AO75110 1047 aa16.24■□□□□ 0.19
SF1-211ENST00000448404 FLOT1O75955 427 aa16.24■□□□□ 0.19
SF1-211ENST00000448404 XRCC5P13010 732 aaKnown RBP16.24■□□□□ 0.19
SF1-211ENST00000448404 UCHL3P15374 230 aa16.24■□□□□ 0.19
SF1-211ENST00000448404 ITGB3BPQ13352 177 aaPredicted RBP16.24■□□□□ 0.19
SF1-211ENST00000448404 SLC9C1Q4G0N8 1177 aa16.24■□□□□ 0.19
SF1-211ENST00000448404 NBPF12Q5TAG4 269 aaPredicted RBP16.24■□□□□ 0.19
SF1-211ENST00000448404 NSMFQ6X4W1 530 aa16.24■□□□□ 0.19
SF1-211ENST00000448404 CHURC1Q8WUH1 139 aa16.24■□□□□ 0.19
SF1-211ENST00000448404 SLC35C1Q96A29 364 aa16.24■□□□□ 0.19
SF1-211ENST00000448404 CEP63Q96MT8 703 aa16.24■□□□□ 0.19
SF1-211ENST00000448404 SPAG5Q96R06 1193 aa16.24■□□□□ 0.19
SF1-211ENST00000448404 LRRC1Q9BTT6 524 aa16.24■□□□□ 0.19
SF1-211ENST00000448404 KIFC3Q9BVG8 833 aa16.24■□□□□ 0.19
SF1-211ENST00000448404 TLR10Q9BXR5 811 aa16.24■□□□□ 0.19
SF1-211ENST00000448404 USP20Q9Y2K6 914 aa16.24■□□□□ 0.19
SF1-211ENST00000448404 ESYT3A0FGR9 886 aa16.24■□□□□ 0.19
SF1-211ENST00000448404 USO1O60763 962 aaKnown RBP16.24■□□□□ 0.19
SF1-211ENST00000448404 PRELPP51888 382 aa16.24■□□□□ 0.19
SF1-211ENST00000448404 UGCGQ16739 394 aa16.24■□□□□ 0.19
SF1-211ENST00000448404 DAW1Q8N136 415 aa16.24■□□□□ 0.19
SF1-211ENST00000448404 SLC5A5Q92911 643 aa16.24■□□□□ 0.19
SF1-211ENST00000448404 FIZ1Q96SL8 496 aa16.24■□□□□ 0.19
SF1-211ENST00000448404 GCNT4Q9P109 453 aa16.24■□□□□ 0.19
SF1-211ENST00000448404 SNX12Q9UMY4 172 aa16.24■□□□□ 0.19
SF1-211ENST00000448404 L1RE1Q9UN81 338 aa16.24■□□□□ 0.19
SF1-211ENST00000448404 PITPNM2Q9BZ72 1349 aa16.23■□□□□ 0.19
SF1-211ENST00000448404 PHF20L1A8MW92 1017 aa16.23■□□□□ 0.19
SF1-211ENST00000448404 TACC1O75410 805 aa16.23■□□□□ 0.19
SF1-211ENST00000448404 CYP3A4P08684 503 aa16.23■□□□□ 0.19
SF1-211ENST00000448404 USP14P54578 494 aa16.23■□□□□ 0.19
SF1-211ENST00000448404 MRPS9P82933 396 aaKnown RBP16.23■□□□□ 0.19
SF1-211ENST00000448404 EXOC3L4Q17RC7 722 aa16.23■□□□□ 0.19
SF1-211ENST00000448404 CBWD6Q4V339 395 aa16.23■□□□□ 0.19
SF1-211ENST00000448404 CBWD3Q5JTY5 395 aa16.23■□□□□ 0.19
SF1-211ENST00000448404 CBWD5Q5RIA9 395 aa16.23■□□□□ 0.19
SF1-211ENST00000448404 KLHDC7AQ5VTJ3 777 aa16.23■□□□□ 0.19
SF1-211ENST00000448404 PLA2G4FQ68DD2 849 aa16.23■□□□□ 0.19
SF1-211ENST00000448404 OSBPL9Q96SU4 736 aa16.23■□□□□ 0.19
SF1-211ENST00000448404 CALCOCO1Q9P1Z2 691 aa16.23■□□□□ 0.19
SF1-211ENST00000448404 RAB21Q9UL25 225 aa16.23■□□□□ 0.19
SF1-211ENST00000448404 GFPT2O94808 682 aa16.23■□□□□ 0.19
SF1-211ENST00000448404 AFPP02771 609 aaKnown RBP16.23■□□□□ 0.19
SF1-211ENST00000448404 NPEPPSP55786 919 aa16.23■□□□□ 0.19
SF1-211ENST00000448404 DLG4P78352 724 aa16.23■□□□□ 0.19
SF1-211ENST00000448404 CDK17Q00537 523 aa16.23■□□□□ 0.19
SF1-211ENST00000448404 CASP8Q14790 479 aa16.23■□□□□ 0.19
SF1-211ENST00000448404 TRADDQ15628 312 aa16.23■□□□□ 0.19
SF1-211ENST00000448404 CLEC4DQ8WXI8 215 aa16.23■□□□□ 0.19
SF1-211ENST00000448404 HIP1RO75146 1068 aa16.22■□□□□ 0.19
SF1-211ENST00000448404 ASIC2Q16515 512 aa16.22■□□□□ 0.19
SF1-211ENST00000448404 FAM178BQ8IXR5 827 aa16.22■□□□□ 0.19
SF1-211ENST00000448404 PSMD1Q99460 953 aa16.22■□□□□ 0.19
SF1-211ENST00000448404 POLR3CQ9BUI4 534 aaPredicted RBP16.22■□□□□ 0.19
SF1-211ENST00000448404 TRAF3IP3Q9Y228 551 aa16.22■□□□□ 0.19
SF1-211ENST00000448404 MRPL11Q9Y3B7 192 aaKnown RBP16.22■□□□□ 0.19
SF1-211ENST00000448404 TNS1Q9HBL0 1735 aaKnown RBP16.22■□□□□ 0.19
SF1-211ENST00000448404 CIAPIN1Q6FI81 312 aa16.22■□□□□ 0.19
SF1-211ENST00000448404 CCDC102AQ96A19 550 aa16.22■□□□□ 0.19
SF1-211ENST00000448404 TEPSINQ96N21 525 aa16.22■□□□□ 0.19
SF1-211ENST00000448404 PARVGQ9HBI0 331 aa16.22■□□□□ 0.19
SF1-211ENST00000448404 ACP6Q9NPH0 428 aa16.22■□□□□ 0.19
SF1-211ENST00000448404 GOLGA8IPA6NC78 632 aa16.21■□□□□ 0.19
SF1-211ENST00000448404 GOLGA8JA6NMD2 632 aa16.21■□□□□ 0.19
SF1-211ENST00000448404 NFKBIEO00221 500 aa16.21■□□□□ 0.19
SF1-211ENST00000448404 SERPING1P05155 500 aa16.21■□□□□ 0.19
SF1-211ENST00000448404 RPS6P62753 249 aaKnown RBP16.21■□□□□ 0.19
SF1-211ENST00000448404 BRD3Q15059 726 aa16.21■□□□□ 0.19
SF1-211ENST00000448404 EDRF1Q3B7T1 1238 aa16.21■□□□□ 0.19
SF1-211ENST00000448404 IRF2BP2Q7Z5L9 587 aa16.21■□□□□ 0.19
SF1-211ENST00000448404 SIX2Q9NPC8 291 aa16.21■□□□□ 0.19
SF1-211ENST00000448404 RBM12Q9NTZ6 932 aaKnown RBP16.21■□□□□ 0.19
SF1-211ENST00000448404 TYW1Q9NV66 732 aaKnown RBP16.21■□□□□ 0.19
SF1-211ENST00000448404 VPS18Q9P253 973 aa16.21■□□□□ 0.19
SF1-211ENST00000448404 ASNSP08243 561 aa16.21■□□□□ 0.19
SF1-211ENST00000448404 PTGER2P43116 358 aa16.21■□□□□ 0.19
SF1-211ENST00000448404 EPHA7Q15375 998 aa16.21■□□□□ 0.19
SF1-211ENST00000448404 ARHGAP44Q17R89 818 aa16.21■□□□□ 0.19
SF1-211ENST00000448404 IQCEQ6IPM2 695 aa16.21■□□□□ 0.19
SF1-211ENST00000448404 TRIM58Q8NG06 486 aa16.21■□□□□ 0.19
SF1-211ENST00000448404 TESPA1A2RU30 521 aaPredicted RBP16.21■□□□□ 0.18
SF1-211ENST00000448404 MAP2K7O14733 419 aa16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms