RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 SEPT9Q9UHD8 586 aaPredicted RBP23.47■■□□□ 1.35
VPS13B-204ENST00000441350 SYNRGQ9UMZ2 1314 aa23.47■■□□□ 1.35
VPS13B-204ENST00000441350 ZNF286BP0CG31 522 aa23.46■■□□□ 1.35
VPS13B-204ENST00000441350 LBX1P52954 281 aa23.46■■□□□ 1.35
VPS13B-204ENST00000441350 PLCB4Q15147 1175 aa23.46■■□□□ 1.35
VPS13B-204ENST00000441350 BRDTQ58F21 947 aaPredicted RBP23.46■■□□□ 1.35
VPS13B-204ENST00000441350 DYMQ7RTS9 669 aa23.46■■□□□ 1.35
VPS13B-204ENST00000441350 BBXQ8WY36 941 aaPredicted RBP23.46■■□□□ 1.35
VPS13B-204ENST00000441350 DDX20Q9UHI6 824 aaKnown RBP23.46■■□□□ 1.35
VPS13B-204ENST00000441350 RPN1P04843 607 aaKnown RBP23.45■■□□□ 1.34
VPS13B-204ENST00000441350 MARK3P27448 753 aa23.45■■□□□ 1.34
VPS13B-204ENST00000441350 ASIC1P78348 528 aa23.45■■□□□ 1.34
VPS13B-204ENST00000441350 SH3TC2Q8TF17 1288 aa23.45■■□□□ 1.34
VPS13B-204ENST00000441350 CEP170P1Q96L14 293 aa23.45■■□□□ 1.34
VPS13B-204ENST00000441350 SH2D3AQ9BRG2 576 aa23.45■■□□□ 1.34
VPS13B-204ENST00000441350 HMX1Q9NP08 348 aaPredicted RBP23.45■■□□□ 1.34
VPS13B-204ENST00000441350 CYP26B1Q9NR63 512 aa23.45■■□□□ 1.34
VPS13B-204ENST00000441350 MAN1B1Q9UKM7 699 aa23.45■■□□□ 1.34
VPS13B-204ENST00000441350 CENPFP49454 3210 aa23.45■■□□□ 1.34
VPS13B-204ENST00000441350 NPHP3-ACAD11A0A0J9YXS1 232 aa23.44■■□□□ 1.34
VPS13B-204ENST00000441350 PVALEFA0A1B0GWK0 134 aa23.44■■□□□ 1.34
VPS13B-204ENST00000441350 H3BRB1 525 aa23.44■■□□□ 1.34
VPS13B-204ENST00000441350 ADAMTS4O75173 837 aa23.44■■□□□ 1.34
VPS13B-204ENST00000441350 BEX3Q00994 111 aa23.44■■□□□ 1.34
VPS13B-204ENST00000441350 GIT2Q14161 759 aa23.44■■□□□ 1.34
VPS13B-204ENST00000441350 TARBP2Q15633 366 aaKnown RBP23.44■■□□□ 1.34
VPS13B-204ENST00000441350 SASS6Q6UVJ0 657 aa23.44■■□□□ 1.34
VPS13B-204ENST00000441350 CTU1Q7Z7A3 348 aaKnown RBP23.44■■□□□ 1.34
VPS13B-204ENST00000441350 CCDC43Q96MW1 224 aaKnown RBP23.44■■□□□ 1.34
VPS13B-204ENST00000441350 CEP89Q96ST8 783 aa23.44■■□□□ 1.34
VPS13B-204ENST00000441350 TUT1Q9H6E5 874 aaKnown RBP23.44■■□□□ 1.34
VPS13B-204ENST00000441350 ZNF215Q9UL58 517 aaPredicted RBP23.44■■□□□ 1.34
VPS13B-204ENST00000441350 MYADML2A6NDP7 307 aa23.44■■□□□ 1.34
VPS13B-204ENST00000441350 PGK1P00558 417 aa23.44■■□□□ 1.34
VPS13B-204ENST00000441350 C6orf222P0C671 652 aaPredicted RBP23.44■■□□□ 1.34
VPS13B-204ENST00000441350 GUCY2CP25092 1073 aa23.44■■□□□ 1.34
VPS13B-204ENST00000441350 KCNB1Q14721 858 aa23.44■■□□□ 1.34
VPS13B-204ENST00000441350 LRSAM1Q6UWE0 723 aa23.44■■□□□ 1.34
VPS13B-204ENST00000441350 UNC13DQ70J99 1090 aa23.44■■□□□ 1.34
VPS13B-204ENST00000441350 REEP2Q9BRK0 252 aa23.44■■□□□ 1.34
VPS13B-204ENST00000441350 RNPEPQ9H4A4 650 aa23.44■■□□□ 1.34
VPS13B-204ENST00000441350 SPC25Q9HBM1 224 aa23.44■■□□□ 1.34
VPS13B-204ENST00000441350 XPNPEP3Q9NQH7 507 aa23.44■■□□□ 1.34
VPS13B-204ENST00000441350 FRMD3A2A2Y4 597 aa23.43■■□□□ 1.34
VPS13B-204ENST00000441350 BIN1O00499 593 aa23.43■■□□□ 1.34
VPS13B-204ENST00000441350 MSCO60682 206 aa23.43■■□□□ 1.34
VPS13B-204ENST00000441350 F2P00734 622 aa23.43■■□□□ 1.34
VPS13B-204ENST00000441350 KRT18P05783 430 aaKnown RBP23.43■■□□□ 1.34
VPS13B-204ENST00000441350 TYRO3Q06418 890 aa23.43■■□□□ 1.34
VPS13B-204ENST00000441350 MORC3Q14149 939 aa23.43■■□□□ 1.34
VPS13B-204ENST00000441350 KMT5BQ4FZB7 885 aa23.43■■□□□ 1.34
VPS13B-204ENST00000441350 TRIML1Q8N9V2 468 aa23.43■■□□□ 1.34
VPS13B-204ENST00000441350 KAT2BQ92831 832 aa23.43■■□□□ 1.34
VPS13B-204ENST00000441350 PDLIM7Q9NR12 457 aa23.43■■□□□ 1.34
VPS13B-204ENST00000441350 PPME1Q9Y570 386 aa23.43■■□□□ 1.34
VPS13B-204ENST00000441350 ZBTB42B2RXF5 422 aa23.42■■□□□ 1.34
VPS13B-204ENST00000441350 HBP1O60381 514 aa23.42■■□□□ 1.34
VPS13B-204ENST00000441350 KPNA6O60684 536 aa23.42■■□□□ 1.34
VPS13B-204ENST00000441350 CCDC192P0DO97 292 aa23.42■■□□□ 1.34
VPS13B-204ENST00000441350 BMP6P22004 513 aa23.42■■□□□ 1.34
VPS13B-204ENST00000441350 RAD51AP2Q09MP3 1159 aa23.42■■□□□ 1.34
VPS13B-204ENST00000441350 MTERF2Q49AM1 385 aa23.42■■□□□ 1.34
VPS13B-204ENST00000441350 SLC9C1Q4G0N8 1177 aa23.42■■□□□ 1.34
VPS13B-204ENST00000441350 GNASQ5JWF2 1037 aa23.42■■□□□ 1.34
VPS13B-204ENST00000441350 KLHDC9Q8NEP7 349 aa23.42■■□□□ 1.34
VPS13B-204ENST00000441350 RMND1Q9NWS8 449 aa23.42■■□□□ 1.34
VPS13B-204ENST00000441350 USO1O60763 962 aaKnown RBP23.41■■□□□ 1.34
VPS13B-204ENST00000441350 RHOBTB3O94955 611 aa23.41■■□□□ 1.34
VPS13B-204ENST00000441350 CST5P28325 142 aaPredicted RBP23.41■■□□□ 1.34
VPS13B-204ENST00000441350 EHHADHQ08426 723 aa23.41■■□□□ 1.34
VPS13B-204ENST00000441350 LHX8Q68G74 356 aa23.41■■□□□ 1.34
VPS13B-204ENST00000441350 TIPINQ9BVW5 301 aa23.41■■□□□ 1.34
VPS13B-204ENST00000441350 DGAT1O75907 488 aa23.41■■□□□ 1.34
VPS13B-204ENST00000441350 MYL3P08590 195 aa23.41■■□□□ 1.34
VPS13B-204ENST00000441350 IDEP14735 1019 aa23.41■■□□□ 1.34
VPS13B-204ENST00000441350 NLRP12P59046 1061 aa23.41■■□□□ 1.34
VPS13B-204ENST00000441350 PURAQ00577 322 aaKnown RBP23.41■■□□□ 1.34
VPS13B-204ENST00000441350 CACNB1Q02641 598 aaPredicted RBP23.41■■□□□ 1.34
VPS13B-204ENST00000441350 ISM2Q6H9L7 571 aa23.41■■□□□ 1.34
VPS13B-204ENST00000441350 DHX33Q9H6R0 707 aaKnown RBP23.41■■□□□ 1.34
VPS13B-204ENST00000441350 PANK4Q9NVE7 773 aa23.41■■□□□ 1.34
VPS13B-204ENST00000441350 ODF2LQ9ULJ1 636 aa23.41■■□□□ 1.34
VPS13B-204ENST00000441350 TRPC6Q9Y210 931 aa23.41■■□□□ 1.34
VPS13B-204ENST00000441350 HAS3O00219 553 aa23.4■■□□□ 1.34
VPS13B-204ENST00000441350 MAPK7Q13164 816 aa23.4■■□□□ 1.34
VPS13B-204ENST00000441350 STX1AQ16623 288 aa23.4■■□□□ 1.34
VPS13B-204ENST00000441350 CCSAPQ6IQ19 270 aaPredicted RBP23.4■■□□□ 1.34
VPS13B-204ENST00000441350 FBXO46Q6PJ61 603 aaPredicted RBP23.4■■□□□ 1.34
VPS13B-204ENST00000441350 CCDC65Q8IXS2 484 aa23.4■■□□□ 1.34
VPS13B-204ENST00000441350 DAW1Q8N136 415 aa23.4■■□□□ 1.34
VPS13B-204ENST00000441350 CCDC47Q96A33 483 aaKnown RBP23.4■■□□□ 1.34
VPS13B-204ENST00000441350 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.4■■□□□ 1.34
VPS13B-204ENST00000441350 EXOC1Q9NV70 894 aa23.4■■□□□ 1.34
VPS13B-204ENST00000441350 FRMPD3Q5JV73 1810 aa23.4■■□□□ 1.34
VPS13B-204ENST00000441350 RSPH10B2B2RC85 870 aa23.39■■□□□ 1.33
VPS13B-204ENST00000441350 RSPH10BP0C881 870 aa23.39■■□□□ 1.33
VPS13B-204ENST00000441350 RFC5P40937 340 aa23.39■■□□□ 1.33
VPS13B-204ENST00000441350 ZNF131P52739 623 aa23.39■■□□□ 1.33
VPS13B-204ENST00000441350 COASYQ13057 564 aa23.39■■□□□ 1.33
VPS13B-204ENST00000441350 ZNF484Q5JVG2 852 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms