RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 MRPL12P52815 198 aaKnown RBP8.84□□□□□ -0.99
VTI1A-202ENST00000432306 NAP1L1P55209 391 aaKnown RBP8.84□□□□□ -0.99
VTI1A-202ENST00000432306 ACTN3Q08043 901 aaPredicted RBP8.84□□□□□ -0.99
VTI1A-202ENST00000432306 KIF5AQ12840 1032 aa8.84□□□□□ -0.99
VTI1A-202ENST00000432306 NEDD9Q14511 834 aa8.84□□□□□ -0.99
VTI1A-202ENST00000432306 LONRF1Q17RB8 773 aa8.84□□□□□ -0.99
VTI1A-202ENST00000432306 FBXW10Q5XX13 1052 aa8.84□□□□□ -0.99
VTI1A-202ENST00000432306 HAUS3Q68CZ6 603 aa8.84□□□□□ -0.99
VTI1A-202ENST00000432306 PPP4R3AQ6IN85 833 aa8.84□□□□□ -0.99
VTI1A-202ENST00000432306 STYK1Q6J9G0 422 aa8.84□□□□□ -0.99
VTI1A-202ENST00000432306 TTI2Q6NXR4 508 aa8.84□□□□□ -0.99
VTI1A-202ENST00000432306 MFSD6Q6ZSS7 791 aa8.84□□□□□ -0.99
VTI1A-202ENST00000432306 ARMC9Q7Z3E5 817 aa8.84□□□□□ -0.99
VTI1A-202ENST00000432306 CCDC50Q8IVM0 306 aa8.84□□□□□ -0.99
VTI1A-202ENST00000432306 SMYD4Q8IYR2 804 aaPredicted RBP8.84□□□□□ -0.99
VTI1A-202ENST00000432306 ZBTB38Q8NAP3 1195 aaPredicted RBP8.84□□□□□ -0.99
VTI1A-202ENST00000432306 GTF3C2Q8WUA4 911 aaPredicted RBP8.84□□□□□ -0.99
VTI1A-202ENST00000432306 P3H4Q92791 437 aa8.84□□□□□ -0.99
VTI1A-202ENST00000432306 E2F7Q96AV8 911 aa8.84□□□□□ -0.99
VTI1A-202ENST00000432306 DHTKD1Q96HY7 919 aaPredicted RBP8.84□□□□□ -0.99
VTI1A-202ENST00000432306 MYL10Q9BUA6 226 aa8.84□□□□□ -0.99
VTI1A-202ENST00000432306 ACTR5Q9H9F9 607 aaPredicted RBP8.84□□□□□ -0.99
VTI1A-202ENST00000432306 NHEJ1Q9H9Q4 299 aaPredicted RBP8.84□□□□□ -0.99
VTI1A-202ENST00000432306 PIH1D3Q9NQM4 214 aaKnown RBP8.84□□□□□ -0.99
VTI1A-202ENST00000432306 TOMM22Q9NS69 142 aa8.84□□□□□ -0.99
VTI1A-202ENST00000432306 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.84□□□□□ -0.99
VTI1A-202ENST00000432306 CXXC1Q9P0U4 656 aaPredicted RBP8.84□□□□□ -0.99
VTI1A-202ENST00000432306 ABT1Q9ULW3 272 aaKnown RBP8.84□□□□□ -0.99
VTI1A-202ENST00000432306 PCDHGB7Q9Y5F8 929 aa8.84□□□□□ -0.99
VTI1A-202ENST00000432306 ARAP2Q8WZ64 1704 aa8.84□□□□□ -0.99
VTI1A-202ENST00000432306 GSG1L2A8MUP6 293 aa8.83□□□□□ -1
VTI1A-202ENST00000432306 USO1O60763 962 aaKnown RBP8.83□□□□□ -1
VTI1A-202ENST00000432306 KIAA0754O94854 1291 aa8.83□□□□□ -1
VTI1A-202ENST00000432306 FAM107AO95990 144 aa8.83□□□□□ -1
VTI1A-202ENST00000432306 IDEP14735 1019 aa8.83□□□□□ -1
VTI1A-202ENST00000432306 FGFR2P21802 821 aa8.83□□□□□ -1
VTI1A-202ENST00000432306 LSP1P33241 339 aa8.83□□□□□ -1
VTI1A-202ENST00000432306 EPHX2P34913 555 aa8.83□□□□□ -1
VTI1A-202ENST00000432306 PRCPP42785 496 aa8.83□□□□□ -1
VTI1A-202ENST00000432306 ALFQ53S48 1182 aa8.83□□□□□ -1
VTI1A-202ENST00000432306 TTC38Q5R3I4 469 aa8.83□□□□□ -1
VTI1A-202ENST00000432306 NAA35Q5VZE5 725 aa8.83□□□□□ -1
VTI1A-202ENST00000432306 PRR5LQ6MZQ0 368 aa8.83□□□□□ -1
VTI1A-202ENST00000432306 PI16Q6UXB8 463 aa8.83□□□□□ -1
VTI1A-202ENST00000432306 LRIG3Q6UXM1 1119 aa8.83□□□□□ -1
VTI1A-202ENST00000432306 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.83□□□□□ -1
VTI1A-202ENST00000432306 KIAA1328Q86T90 577 aa8.83□□□□□ -1
VTI1A-202ENST00000432306 RNF10Q8N5U6 811 aaKnown RBP8.83□□□□□ -1
VTI1A-202ENST00000432306 LSM14AQ8ND56 463 aaKnown RBP8.83□□□□□ -1
VTI1A-202ENST00000432306 GIMAP8Q8ND71 665 aaPredicted RBP8.83□□□□□ -1
VTI1A-202ENST00000432306 TTLL11Q8NHH1 800 aa8.83□□□□□ -1
VTI1A-202ENST00000432306 SH3TC2Q8TF17 1288 aa8.83□□□□□ -1
VTI1A-202ENST00000432306 ZBTB9Q96C00 473 aa8.83□□□□□ -1
VTI1A-202ENST00000432306 MASTLQ96GX5 879 aa8.83□□□□□ -1
VTI1A-202ENST00000432306 AGBL1Q96MI9 1066 aa8.83□□□□□ -1
VTI1A-202ENST00000432306 OSBPL9Q96SU4 736 aa8.83□□□□□ -1
VTI1A-202ENST00000432306 LRRC1Q9BTT6 524 aa8.83□□□□□ -1
VTI1A-202ENST00000432306 EDEM3Q9BZQ6 932 aa8.83□□□□□ -1
VTI1A-202ENST00000432306 NAPBQ9H115 298 aa8.83□□□□□ -1
VTI1A-202ENST00000432306 CLIC5Q9NZA1 410 aa8.83□□□□□ -1
VTI1A-202ENST00000432306 CNTN3Q9P232 1028 aa8.83□□□□□ -1
VTI1A-202ENST00000432306 MCM8Q9UJA3 840 aa8.83□□□□□ -1
VTI1A-202ENST00000432306 ERICH2A1L162 156 aa8.83□□□□□ -1
VTI1A-202ENST00000432306 GRID2IPA4D2P6 1211 aa8.83□□□□□ -1
VTI1A-202ENST00000432306 C5orf60A6NFR6 353 aa8.83□□□□□ -1
VTI1A-202ENST00000432306 CFAP99D6REC4 459 aa8.83□□□□□ -1
VTI1A-202ENST00000432306 RBAK-RBAKDNI3L0D1 243 aa8.83□□□□□ -1
VTI1A-202ENST00000432306 CES2O00748 559 aa8.83□□□□□ -1
VTI1A-202ENST00000432306 SLC26A4O43511 780 aa8.83□□□□□ -1
VTI1A-202ENST00000432306 KLRC4O43908 158 aa8.83□□□□□ -1
VTI1A-202ENST00000432306 STARD3NLO95772 234 aa8.83□□□□□ -1
VTI1A-202ENST00000432306 PAEPP09466 180 aa8.83□□□□□ -1
VTI1A-202ENST00000432306 CALM1P0DP23 149 aa8.83□□□□□ -1
VTI1A-202ENST00000432306 CALM2P0DP24 149 aa8.83□□□□□ -1
VTI1A-202ENST00000432306 CALM3P0DP25 149 aa8.83□□□□□ -1
VTI1A-202ENST00000432306 NT5C2P49902 561 aa8.83□□□□□ -1
VTI1A-202ENST00000432306 IFIT5Q13325 482 aaKnown RBP8.83□□□□□ -1
VTI1A-202ENST00000432306 MTMR2Q13614 643 aa8.83□□□□□ -1
VTI1A-202ENST00000432306 PTGISQ16647 500 aa8.83□□□□□ -1
VTI1A-202ENST00000432306 EARS2Q5JPH6 523 aaKnown RBP8.83□□□□□ -1
VTI1A-202ENST00000432306 ARFGAP2Q8N6H7 521 aa8.83□□□□□ -1
VTI1A-202ENST00000432306 C4orf32Q8N8J7 132 aa8.83□□□□□ -1
VTI1A-202ENST00000432306 TSEN2Q8NCE0 465 aaKnown RBP8.83□□□□□ -1
VTI1A-202ENST00000432306 CAGE1Q8TC20 777 aa8.83□□□□□ -1
VTI1A-202ENST00000432306 WHAMMQ8TF30 809 aa8.83□□□□□ -1
VTI1A-202ENST00000432306 ZKSCAN4Q969J2 545 aaPredicted RBP8.83□□□□□ -1
VTI1A-202ENST00000432306 ARL8AQ96BM9 186 aa8.83□□□□□ -1
VTI1A-202ENST00000432306 ZIM3Q96PE6 472 aa8.83□□□□□ -1
VTI1A-202ENST00000432306 EHD4Q9H223 541 aa8.83□□□□□ -1
VTI1A-202ENST00000432306 CUEDC2Q9H467 287 aa8.83□□□□□ -1
VTI1A-202ENST00000432306 EXOC1Q9NV70 894 aa8.83□□□□□ -1
VTI1A-202ENST00000432306 KBTBD4Q9NVX7 518 aa8.83□□□□□ -1
VTI1A-202ENST00000432306 SNTG2Q9NY99 539 aa8.83□□□□□ -1
VTI1A-202ENST00000432306 RABGAP1Q9Y3P9 1069 aa8.83□□□□□ -1
VTI1A-202ENST00000432306 CAPN7Q9Y6W3 813 aa8.83□□□□□ -1
VTI1A-202ENST00000432306 BCORQ6W2J9 1755 aa8.82□□□□□ -1
VTI1A-202ENST00000432306 SSU72P8A0A1W2PR75 194 aa8.82□□□□□ -1
VTI1A-202ENST00000432306 ZNF263O14978 683 aa8.82□□□□□ -1
VTI1A-202ENST00000432306 ZNF185O15231 689 aa8.82□□□□□ -1
VTI1A-202ENST00000432306 PDE8BO95263 885 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 140.7 ms