RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 TAF1DQ9H5J8 278 aaPredicted RBP15.7■□□□□ 0.1
ERCC3-202ENST00000426778 CAPN7Q9Y6W3 813 aa15.7■□□□□ 0.1
ERCC3-202ENST00000426778 ASTN1O14525 1302 aa15.7■□□□□ 0.1
ERCC3-202ENST00000426778 IGSF9BQ9UPX0 1349 aa15.7■□□□□ 0.1
ERCC3-202ENST00000426778 IBSPP21815 317 aaPredicted RBP15.69■□□□□ 0.1
ERCC3-202ENST00000426778 CTNNA1P35221 906 aaKnown RBP15.69■□□□□ 0.1
ERCC3-202ENST00000426778 ZNF76P36508 570 aa15.69■□□□□ 0.1
ERCC3-202ENST00000426778 CYP2J2P51589 502 aa15.69■□□□□ 0.1
ERCC3-202ENST00000426778 APOBEC3HQ6NTF7 200 aaKnown RBP15.69■□□□□ 0.1
ERCC3-202ENST00000426778 GBP6Q6ZN66 633 aa15.69■□□□□ 0.1
ERCC3-202ENST00000426778 TPH2Q8IWU9 490 aa15.69■□□□□ 0.1
ERCC3-202ENST00000426778 ETNPPLQ8TBG4 499 aa15.69■□□□□ 0.1
ERCC3-202ENST00000426778 ATP6V1G3Q96LB4 118 aa15.69■□□□□ 0.1
ERCC3-202ENST00000426778 SH2D3AQ9BRG2 576 aa15.69■□□□□ 0.1
ERCC3-202ENST00000426778 FBXL5Q9UKA1 691 aa15.69■□□□□ 0.1
ERCC3-202ENST00000426778 ATP2C2O75185 946 aa15.69■□□□□ 0.1
ERCC3-202ENST00000426778 USP11P51784 963 aa15.69■□□□□ 0.1
ERCC3-202ENST00000426778 JAG1P78504 1218 aa15.69■□□□□ 0.1
ERCC3-202ENST00000426778 EPHA7Q15375 998 aa15.69■□□□□ 0.1
ERCC3-202ENST00000426778 ODF2Q5BJF6 829 aa15.69■□□□□ 0.1
ERCC3-202ENST00000426778 HYIQ5T013 277 aa15.69■□□□□ 0.1
ERCC3-202ENST00000426778 C15orf52Q6ZUT6 534 aaKnown RBP15.69■□□□□ 0.1
ERCC3-202ENST00000426778 LRRC57Q8N9N7 239 aa15.69■□□□□ 0.1
ERCC3-202ENST00000426778 SLC35C1Q96A29 364 aa15.69■□□□□ 0.1
ERCC3-202ENST00000426778 SIX2Q9NPC8 291 aa15.69■□□□□ 0.1
ERCC3-202ENST00000426778 PKD2L1Q9P0L9 805 aa15.69■□□□□ 0.1
ERCC3-202ENST00000426778 NHSQ6T4R5 1651 aa15.69■□□□□ 0.1
ERCC3-202ENST00000426778 SMIM23A6NLE4 172 aa15.68■□□□□ 0.1
ERCC3-202ENST00000426778 MSH4O15457 936 aa15.68■□□□□ 0.1
ERCC3-202ENST00000426778 HLA-DOAP06340 250 aa15.68■□□□□ 0.1
ERCC3-202ENST00000426778 GCFC2P16383 781 aaKnown RBP15.68■□□□□ 0.1
ERCC3-202ENST00000426778 TNFRSF8P28908 595 aa15.68■□□□□ 0.1
ERCC3-202ENST00000426778 SKOR1P84550 965 aa15.68■□□□□ 0.1
ERCC3-202ENST00000426778 UHMK1Q8TAS1 419 aaKnown RBP15.68■□□□□ 0.1
ERCC3-202ENST00000426778 LENG9Q96B70 501 aa15.68■□□□□ 0.1
ERCC3-202ENST00000426778 TAS2R14Q9NYV8 317 aa15.68■□□□□ 0.1
ERCC3-202ENST00000426778 SPDYE3A6NKU9 549 aa15.68■□□□□ 0.1
ERCC3-202ENST00000426778 PPEF1O14829 653 aaPredicted RBP15.68■□□□□ 0.1
ERCC3-202ENST00000426778 NT5C2P49902 561 aa15.68■□□□□ 0.1
ERCC3-202ENST00000426778 GALCP54803 685 aa15.68■□□□□ 0.1
ERCC3-202ENST00000426778 IFT88Q13099 833 aa15.68■□□□□ 0.1
ERCC3-202ENST00000426778 ELMO3Q96BJ8 720 aa15.68■□□□□ 0.1
ERCC3-202ENST00000426778 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.68■□□□□ 0.1
ERCC3-202ENST00000426778 AHDC1Q5TGY3 1603 aaPredicted RBP15.68■□□□□ 0.1
ERCC3-202ENST00000426778 EVI5O60447 810 aa15.67■□□□□ 0.1
ERCC3-202ENST00000426778 TBCAO75347 108 aaKnown RBP15.67■□□□□ 0.1
ERCC3-202ENST00000426778 FGGP02679 453 aa15.67■□□□□ 0.1
ERCC3-202ENST00000426778 MARSP56192 900 aaKnown RBP15.67■□□□□ 0.1
ERCC3-202ENST00000426778 CERKLQ49MI3 558 aaPredicted RBP15.67■□□□□ 0.1
ERCC3-202ENST00000426778 SIAH1Q8IUQ4 282 aa15.67■□□□□ 0.1
ERCC3-202ENST00000426778 MYCT1Q8N699 235 aa15.67■□□□□ 0.1
ERCC3-202ENST00000426778 LNX1Q8TBB1 728 aaPredicted RBP15.67■□□□□ 0.1
ERCC3-202ENST00000426778 PPP1R9AQ9ULJ8 1098 aa15.67■□□□□ 0.1
ERCC3-202ENST00000426778 PLIN4Q96Q06 1357 aa15.67■□□□□ 0.1
ERCC3-202ENST00000426778 PGRMC1O00264 195 aaKnown RBP15.67■□□□□ 0.1
ERCC3-202ENST00000426778 PPP1R37O75864 691 aa15.67■□□□□ 0.1
ERCC3-202ENST00000426778 PPP1R18Q6NYC8 613 aa15.67■□□□□ 0.1
ERCC3-202ENST00000426778 KDM7AQ6ZMT4 941 aa15.67■□□□□ 0.1
ERCC3-202ENST00000426778 ZNF473Q8WTR7 871 aaKnown RBP15.67■□□□□ 0.1
ERCC3-202ENST00000426778 CCT8L2Q96SF2 557 aa15.67■□□□□ 0.1
ERCC3-202ENST00000426778 TMEM110-MUSTN1A8MSY1 372 aa15.67■□□□□ 0.1
ERCC3-202ENST00000426778 TISP43B9A030 160 aa15.67■□□□□ 0.1
ERCC3-202ENST00000426778 F5H6K3 240 aa15.67■□□□□ 0.1
ERCC3-202ENST00000426778 H0YHG0 523 aa15.67■□□□□ 0.1
ERCC3-202ENST00000426778 H2AFZP0C0S5 128 aa15.67■□□□□ 0.1
ERCC3-202ENST00000426778 KLRC3Q07444 240 aa15.67■□□□□ 0.1
ERCC3-202ENST00000426778 ITGB3BPQ13352 177 aaPredicted RBP15.67■□□□□ 0.1
ERCC3-202ENST00000426778 PTGISQ16647 500 aa15.67■□□□□ 0.1
ERCC3-202ENST00000426778 EDRF1Q3B7T1 1238 aa15.67■□□□□ 0.1
ERCC3-202ENST00000426778 UBAP2Q5T6F2 1119 aaKnown RBP15.67■□□□□ 0.1
ERCC3-202ENST00000426778 H2AFVQ71UI9 128 aa15.67■□□□□ 0.1
ERCC3-202ENST00000426778 SYT2Q8N9I0 419 aaPredicted RBP15.67■□□□□ 0.1
ERCC3-202ENST00000426778 GLG1Q92896 1179 aa15.67■□□□□ 0.1
ERCC3-202ENST00000426778 EIF2AK1Q9BQI3 630 aaKnown RBP15.67■□□□□ 0.1
ERCC3-202ENST00000426778 ISCUQ9H1K1 167 aa15.67■□□□□ 0.1
ERCC3-202ENST00000426778 TMOD4Q9NZQ9 345 aa15.67■□□□□ 0.1
ERCC3-202ENST00000426778 RNF14Q9UBS8 474 aa15.67■□□□□ 0.1
ERCC3-202ENST00000426778 TMEM59LQ9UK28 342 aa15.67■□□□□ 0.1
ERCC3-202ENST00000426778 USP21Q9UK80 565 aa15.67■□□□□ 0.1
ERCC3-202ENST00000426778 FRMD3A2A2Y4 597 aa15.66■□□□□ 0.1
ERCC3-202ENST00000426778 GOLGA6L10A6NI86 522 aa15.66■□□□□ 0.1
ERCC3-202ENST00000426778 TGFB1I1O43294 461 aa15.66■□□□□ 0.1
ERCC3-202ENST00000426778 BUB1BO60566 1050 aaPredicted RBP15.66■□□□□ 0.1
ERCC3-202ENST00000426778 BBOX1O75936 387 aa15.66■□□□□ 0.1
ERCC3-202ENST00000426778 FLOT1O75955 427 aa15.66■□□□□ 0.1
ERCC3-202ENST00000426778 CFBP00751 764 aa15.66■□□□□ 0.1
ERCC3-202ENST00000426778 MDH1P40925 334 aaKnown RBP15.66■□□□□ 0.1
ERCC3-202ENST00000426778 GTF2A1P52655 376 aaPredicted RBP15.66■□□□□ 0.1
ERCC3-202ENST00000426778 ICA1Q05084 483 aa15.66■□□□□ 0.1
ERCC3-202ENST00000426778 ZNF844Q08AG5 666 aa15.66■□□□□ 0.1
ERCC3-202ENST00000426778 VPS72Q15906 364 aa15.66■□□□□ 0.1
ERCC3-202ENST00000426778 CBWD6Q4V339 395 aa15.66■□□□□ 0.1
ERCC3-202ENST00000426778 CBWD3Q5JTY5 395 aa15.66■□□□□ 0.1
ERCC3-202ENST00000426778 CBWD5Q5RIA9 395 aa15.66■□□□□ 0.1
ERCC3-202ENST00000426778 OTUD6BQ8N6M0 293 aa15.66■□□□□ 0.1
ERCC3-202ENST00000426778 BANK1Q8NDB2 785 aa15.66■□□□□ 0.1
ERCC3-202ENST00000426778 MDM1Q8TC05 714 aa15.66■□□□□ 0.1
ERCC3-202ENST00000426778 WHAMMQ8TF30 809 aa15.66■□□□□ 0.1
ERCC3-202ENST00000426778 SCFD2Q8WU76 684 aa15.66■□□□□ 0.1
ERCC3-202ENST00000426778 ARHGEF26Q96DR7 871 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms