RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 GIMAP6Q6P9H5 292 aa7.37□□□□□ -1.23
SDCBP-203ENST00000424270 TRIM50Q86XT4 487 aa7.37□□□□□ -1.23
SDCBP-203ENST00000424270 MRPL43Q8N983 215 aaKnown RBP7.37□□□□□ -1.23
SDCBP-203ENST00000424270 SYTL5Q8TDW5 730 aaPredicted RBP7.37□□□□□ -1.23
SDCBP-203ENST00000424270 LINC01599Q8WXQ3 324 aa7.37□□□□□ -1.23
SDCBP-203ENST00000424270 GLG1Q92896 1179 aa7.37□□□□□ -1.23
SDCBP-203ENST00000424270 MYL10Q9BUA6 226 aa7.37□□□□□ -1.23
SDCBP-203ENST00000424270 SFXN1Q9H9B4 322 aa7.37□□□□□ -1.23
SDCBP-203ENST00000424270 AGO3Q9H9G7 860 aaKnown RBP7.37□□□□□ -1.23
SDCBP-203ENST00000424270 ATP6V0A4Q9HBG4 840 aa7.37□□□□□ -1.23
SDCBP-203ENST00000424270 SPG21Q9NZD8 308 aa7.37□□□□□ -1.23
SDCBP-203ENST00000424270 TUBE1Q9UJT0 475 aa7.37□□□□□ -1.23
SDCBP-203ENST00000424270 PADI3Q9ULW8 664 aa7.37□□□□□ -1.23
SDCBP-203ENST00000424270 GINS2Q9Y248 185 aa7.37□□□□□ -1.23
SDCBP-203ENST00000424270 MYH7BA7E2Y1 1941 aa7.37□□□□□ -1.23
SDCBP-203ENST00000424270 GREB1LQ9C091 1923 aaPredicted RBP7.37□□□□□ -1.23
SDCBP-203ENST00000424270 OTOGLQ3ZCN5 2332 aa7.36□□□□□ -1.23
SDCBP-203ENST00000424270 KIAA1671Q9BY89 1806 aa7.36□□□□□ -1.23
SDCBP-203ENST00000424270 ABCB11O95342 1321 aa7.36□□□□□ -1.23
SDCBP-203ENST00000424270 NRCAMQ92823 1304 aa7.36□□□□□ -1.23
SDCBP-203ENST00000424270 C2orf71A6NGG8 1288 aa7.36□□□□□ -1.23
SDCBP-203ENST00000424270 GSG1L2A8MUP6 293 aa7.36□□□□□ -1.23
SDCBP-203ENST00000424270 FOXD2O60548 495 aaPredicted RBP7.36□□□□□ -1.23
SDCBP-203ENST00000424270 SEC24BO95487 1268 aa7.36□□□□□ -1.23
SDCBP-203ENST00000424270 CFBP00751 764 aa7.36□□□□□ -1.23
SDCBP-203ENST00000424270 RETP07949 1114 aa7.36□□□□□ -1.23
SDCBP-203ENST00000424270 HSPD1P10809 573 aaKnown RBP7.36□□□□□ -1.23
SDCBP-203ENST00000424270 UBA1P22314 1058 aaKnown RBP7.36□□□□□ -1.23
SDCBP-203ENST00000424270 MARK3P27448 753 aa7.36□□□□□ -1.23
SDCBP-203ENST00000424270 PDE4AP27815 886 aa7.36□□□□□ -1.23
SDCBP-203ENST00000424270 PLCB3Q01970 1234 aa7.36□□□□□ -1.23
SDCBP-203ENST00000424270 KCNT2Q6UVM3 1135 aa7.36□□□□□ -1.23
SDCBP-203ENST00000424270 MAML2Q8IZL2 1156 aaPredicted RBP7.36□□□□□ -1.23
SDCBP-203ENST00000424270 SLC44A3Q8N4M1 653 aa7.36□□□□□ -1.23
SDCBP-203ENST00000424270 STRBPQ96SI9 672 aaKnown RBP7.36□□□□□ -1.23
SDCBP-203ENST00000424270 DLGAP2Q9P1A6 1054 aa7.36□□□□□ -1.23
SDCBP-203ENST00000424270 NOP58Q9Y2X3 529 aaKnown RBP7.36□□□□□ -1.23
SDCBP-203ENST00000424270 PLIN4Q96Q06 1357 aa7.35□□□□□ -1.23
SDCBP-203ENST00000424270 WDR19Q8NEZ3 1342 aa7.35□□□□□ -1.23
SDCBP-203ENST00000424270 KANSL1LA0AUZ9 987 aa7.35□□□□□ -1.23
SDCBP-203ENST00000424270 FAM170BA6NMN3 283 aa7.35□□□□□ -1.23
SDCBP-203ENST00000424270 NCAM2O15394 837 aa7.35□□□□□ -1.23
SDCBP-203ENST00000424270 LRP3O75074 770 aa7.35□□□□□ -1.23
SDCBP-203ENST00000424270 FGFR1P11362 822 aa7.35□□□□□ -1.23
SDCBP-203ENST00000424270 HOXD8P13378 290 aaPredicted RBP7.35□□□□□ -1.23
SDCBP-203ENST00000424270 GLULP15104 373 aa7.35□□□□□ -1.23
SDCBP-203ENST00000424270 GNAT2P19087 354 aa7.35□□□□□ -1.23
SDCBP-203ENST00000424270 TGM1P22735 817 aa7.35□□□□□ -1.23
SDCBP-203ENST00000424270 HOXC8P31273 242 aa7.35□□□□□ -1.23
SDCBP-203ENST00000424270 NRLP54845 237 aa7.35□□□□□ -1.23
SDCBP-203ENST00000424270 MGAT3Q09327 533 aa7.35□□□□□ -1.23
SDCBP-203ENST00000424270 SNW1Q13573 536 aaKnown RBP7.35□□□□□ -1.23
SDCBP-203ENST00000424270 SIM2Q14190 667 aaPredicted RBP7.35□□□□□ -1.23
SDCBP-203ENST00000424270 CSRP2Q16527 193 aa7.35□□□□□ -1.23
SDCBP-203ENST00000424270 TMEM266Q2M3C6 531 aa7.35□□□□□ -1.23
SDCBP-203ENST00000424270 HSP90AB4PQ58FF6 505 aa7.35□□□□□ -1.23
SDCBP-203ENST00000424270 PSAPL1Q6NUJ1 521 aa7.35□□□□□ -1.23
SDCBP-203ENST00000424270 ELMSAN1Q6PJG2 1045 aa7.35□□□□□ -1.23
SDCBP-203ENST00000424270 GPR149Q86SP6 731 aa7.35□□□□□ -1.23
SDCBP-203ENST00000424270 RTN4RL1Q86UN2 441 aaPredicted RBP7.35□□□□□ -1.23
SDCBP-203ENST00000424270 KDF1Q8NAX2 398 aaPredicted RBP7.35□□□□□ -1.23
SDCBP-203ENST00000424270 RNF169Q8NCN4 708 aa7.35□□□□□ -1.23
SDCBP-203ENST00000424270 ZBTB44Q8NCP5 570 aa7.35□□□□□ -1.23
SDCBP-203ENST00000424270 RGS22Q8NE09 1264 aa7.35□□□□□ -1.23
SDCBP-203ENST00000424270 ST13P5Q8NFI4 369 aaPredicted RBP7.35□□□□□ -1.23
SDCBP-203ENST00000424270 AUTS2Q8WXX7 1259 aa7.35□□□□□ -1.23
SDCBP-203ENST00000424270 TBC1D5Q92609 795 aa7.35□□□□□ -1.23
SDCBP-203ENST00000424270 TMEM169Q96HH4 297 aa7.35□□□□□ -1.23
SDCBP-203ENST00000424270 ZFP91Q96JP5 570 aaPredicted RBP7.35□□□□□ -1.23
SDCBP-203ENST00000424270 NAPBQ9H115 298 aa7.35□□□□□ -1.23
SDCBP-203ENST00000424270 PIDD1Q9HB75 910 aa7.35□□□□□ -1.23
SDCBP-203ENST00000424270 PXMP2Q9NR77 195 aa7.35□□□□□ -1.23
SDCBP-203ENST00000424270 COL20A1Q9P218 1284 aa7.35□□□□□ -1.23
SDCBP-203ENST00000424270 TRPV2Q9Y5S1 764 aa7.35□□□□□ -1.23
SDCBP-203ENST00000424270 MYO10Q9HD67 2058 aa7.35□□□□□ -1.23
SDCBP-203ENST00000424270 ZNF316A6NFI3 1004 aaPredicted RBP7.34□□□□□ -1.23
SDCBP-203ENST00000424270 RPLP2P05387 115 aaKnown RBP7.34□□□□□ -1.23
SDCBP-203ENST00000424270 TGFB3P10600 412 aa7.34□□□□□ -1.23
SDCBP-203ENST00000424270 CHRM1P11229 460 aaPredicted RBP7.34□□□□□ -1.23
SDCBP-203ENST00000424270 TOP1P11387 765 aaKnown RBP7.34□□□□□ -1.23
SDCBP-203ENST00000424270 SPINK2P20155 84 aa7.34□□□□□ -1.23
SDCBP-203ENST00000424270 KLRC2P26717 231 aa7.34□□□□□ -1.23
SDCBP-203ENST00000424270 CCND2P30279 289 aa7.34□□□□□ -1.23
SDCBP-203ENST00000424270 ALDH7A1P49419 539 aaKnown RBP7.34□□□□□ -1.23
SDCBP-203ENST00000424270 METAP2P50579 478 aaKnown RBP eCLIP7.34□□□□□ -1.23
SDCBP-203ENST00000424270 PPARAQ07869 468 aa7.34□□□□□ -1.23
SDCBP-203ENST00000424270 NEDD9Q14511 834 aa7.34□□□□□ -1.23
SDCBP-203ENST00000424270 GRIK4Q16099 956 aa7.34□□□□□ -1.23
SDCBP-203ENST00000424270 CDC37Q16543 378 aaPredicted RBP7.34□□□□□ -1.23
SDCBP-203ENST00000424270 GNPTABQ3T906 1256 aa7.34□□□□□ -1.23
SDCBP-203ENST00000424270 RRP12Q5JTH9 1297 aaKnown RBP7.34□□□□□ -1.23
SDCBP-203ENST00000424270 ZBTB41Q5SVQ8 909 aa7.34□□□□□ -1.23
SDCBP-203ENST00000424270 BTNL9Q6UXG8 535 aa7.34□□□□□ -1.23
SDCBP-203ENST00000424270 CYFIP1Q7L576 1253 aa7.34□□□□□ -1.23
SDCBP-203ENST00000424270 PPFIBP1Q86W92 1011 aa7.34□□□□□ -1.23
SDCBP-203ENST00000424270 IFNLR1Q8IU57 520 aaPredicted RBP7.34□□□□□ -1.23
SDCBP-203ENST00000424270 VPS52Q8N1B4 723 aa7.34□□□□□ -1.23
SDCBP-203ENST00000424270 LRRC43Q8N309 656 aa7.34□□□□□ -1.23
SDCBP-203ENST00000424270 CELF5Q8N6W0 485 aaKnown RBP7.34□□□□□ -1.23
SDCBP-203ENST00000424270 ARHGAP45Q92619 1136 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms