RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 LGR5O75473 907 aa6.55□□□□□ -1.36
HMGB1P20-201ENST00000402555 ARHGEF15O94989 841 aa6.55□□□□□ -1.36
HMGB1P20-201ENST00000402555 S1PR4O95977 384 aa6.55□□□□□ -1.36
HMGB1P20-201ENST00000402555 CXCL10P02778 98 aa6.55□□□□□ -1.36
HMGB1P20-201ENST00000402555 PFKMP08237 780 aa6.55□□□□□ -1.36
HMGB1P20-201ENST00000402555 CYP3A4P08684 503 aa6.55□□□□□ -1.36
HMGB1P20-201ENST00000402555 RSPH10BP0C881 870 aa6.55□□□□□ -1.36
HMGB1P20-201ENST00000402555 ACTN1P12814 892 aa6.55□□□□□ -1.36
HMGB1P20-201ENST00000402555 INSRRP14616 1297 aa6.55□□□□□ -1.36
HMGB1P20-201ENST00000402555 SLC19A1P41440 591 aa6.55□□□□□ -1.36
HMGB1P20-201ENST00000402555 NEK4P51957 841 aa6.55□□□□□ -1.36
HMGB1P20-201ENST00000402555 WDR5P61964 334 aaKnown RBP6.55□□□□□ -1.36
HMGB1P20-201ENST00000402555 ADAM17P78536 824 aa6.55□□□□□ -1.36
HMGB1P20-201ENST00000402555 DEFB103AP81534 67 aa6.55□□□□□ -1.36
HMGB1P20-201ENST00000402555 PLCB4Q15147 1175 aa6.55□□□□□ -1.36
HMGB1P20-201ENST00000402555 NPY5RQ15761 445 aa6.55□□□□□ -1.36
HMGB1P20-201ENST00000402555 RAB30Q15771 203 aa6.55□□□□□ -1.36
HMGB1P20-201ENST00000402555 GRIK4Q16099 956 aa6.55□□□□□ -1.36
HMGB1P20-201ENST00000402555 ME3Q16798 604 aa6.55□□□□□ -1.36
HMGB1P20-201ENST00000402555 C8orf34Q49A92 452 aa6.55□□□□□ -1.36
HMGB1P20-201ENST00000402555 PRR16Q569H4 304 aa6.55□□□□□ -1.36
HMGB1P20-201ENST00000402555 MARCH8Q5T0T0 291 aa6.55□□□□□ -1.36
HMGB1P20-201ENST00000402555 FAM117BQ6P1L5 589 aa6.55□□□□□ -1.36
HMGB1P20-201ENST00000402555 CPLX2Q6PUV4 134 aaKnown RBP6.55□□□□□ -1.36
HMGB1P20-201ENST00000402555 NIPA1Q7RTP0 329 aa6.55□□□□□ -1.36
HMGB1P20-201ENST00000402555 TRMT1LQ7Z2T5 733 aaKnown RBP6.55□□□□□ -1.36
HMGB1P20-201ENST00000402555 SPRED2Q7Z698 418 aa6.55□□□□□ -1.36
HMGB1P20-201ENST00000402555 TEX2Q8IWB9 1127 aa6.55□□□□□ -1.36
HMGB1P20-201ENST00000402555 SCUBE3Q8IX30 993 aa6.55□□□□□ -1.36
HMGB1P20-201ENST00000402555 DBF4BQ8NFT6 615 aa6.55□□□□□ -1.36
HMGB1P20-201ENST00000402555 BICD2Q8TD16 824 aa6.55□□□□□ -1.36
HMGB1P20-201ENST00000402555 LENG9Q96B70 501 aa6.55□□□□□ -1.36
HMGB1P20-201ENST00000402555 ZNF577Q9BSK1 485 aa6.55□□□□□ -1.36
HMGB1P20-201ENST00000402555 SMARCAD1Q9H4L7 1026 aa6.55□□□□□ -1.36
HMGB1P20-201ENST00000402555 PRDM12Q9H4Q4 367 aa6.55□□□□□ -1.36
HMGB1P20-201ENST00000402555 AZI2Q9H6S1 392 aa6.55□□□□□ -1.36
HMGB1P20-201ENST00000402555 SH3GLB2Q9NR46 395 aa6.55□□□□□ -1.36
HMGB1P20-201ENST00000402555 ERAP1Q9NZ08 941 aa6.55□□□□□ -1.36
HMGB1P20-201ENST00000402555 MSRAQ9UJ68 235 aa6.55□□□□□ -1.36
HMGB1P20-201ENST00000402555 PCDHA4Q9UN74 947 aa6.55□□□□□ -1.36
HMGB1P20-201ENST00000402555 EYSQ5T1H1 3165 aa6.55□□□□□ -1.36
HMGB1P20-201ENST00000402555 PRRC2BQ5JSZ5 2229 aaKnown RBP6.54□□□□□ -1.36
HMGB1P20-201ENST00000402555 EMSYQ7Z589 1322 aa6.54□□□□□ -1.36
HMGB1P20-201ENST00000402555 NRCAMQ92823 1304 aa6.54□□□□□ -1.36
HMGB1P20-201ENST00000402555 TMEM265A0A087WTH1 108 aa6.54□□□□□ -1.36
HMGB1P20-201ENST00000402555 LCHNA4D1U4 455 aa6.54□□□□□ -1.36
HMGB1P20-201ENST00000402555 M0R2N6 131 aa6.54□□□□□ -1.36
HMGB1P20-201ENST00000402555 BACH1O14867 736 aa6.54□□□□□ -1.36
HMGB1P20-201ENST00000402555 MSH4O15457 936 aa6.54□□□□□ -1.36
HMGB1P20-201ENST00000402555 JAK2O60674 1132 aa6.54□□□□□ -1.36
HMGB1P20-201ENST00000402555 ATG7O95352 703 aa6.54□□□□□ -1.36
HMGB1P20-201ENST00000402555 TDP2O95551 362 aa6.54□□□□□ -1.36
HMGB1P20-201ENST00000402555 CA3P07451 260 aa6.54□□□□□ -1.36
HMGB1P20-201ENST00000402555 GNAT1P11488 350 aa6.54□□□□□ -1.36
HMGB1P20-201ENST00000402555 FDPSP14324 419 aaKnown RBP6.54□□□□□ -1.36
HMGB1P20-201ENST00000402555 FOSL2P15408 326 aa6.54□□□□□ -1.36
HMGB1P20-201ENST00000402555 CIITAP33076 1130 aa6.54□□□□□ -1.36
HMGB1P20-201ENST00000402555 KCNJ6P48051 423 aa6.54□□□□□ -1.36
HMGB1P20-201ENST00000402555 STAT5BP51692 787 aa6.54□□□□□ -1.36
HMGB1P20-201ENST00000402555 ST3GAL1Q11201 340 aa6.54□□□□□ -1.36
HMGB1P20-201ENST00000402555 MCTP2Q6DN12 878 aa6.54□□□□□ -1.36
HMGB1P20-201ENST00000402555 SWSAP1Q6NVH7 229 aa6.54□□□□□ -1.36
HMGB1P20-201ENST00000402555 CNKSR3Q6P9H4 555 aa6.54□□□□□ -1.36
HMGB1P20-201ENST00000402555 ABHD15Q6UXT9 468 aa6.54□□□□□ -1.36
HMGB1P20-201ENST00000402555 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.54□□□□□ -1.36
HMGB1P20-201ENST00000402555 TRIM67Q6ZTA4 783 aa6.54□□□□□ -1.36
HMGB1P20-201ENST00000402555 HERC6Q8IVU3 1022 aa6.54□□□□□ -1.36
HMGB1P20-201ENST00000402555 CCDC60Q8IWA6 550 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P20-201ENST00000402555 BLIDQ8IZY5 108 aa6.54□□□□□ -1.36
HMGB1P20-201ENST00000402555 TBCKQ8TEA7 893 aa6.54□□□□□ -1.36
HMGB1P20-201ENST00000402555 DNAJB3Q8WWF6 145 aa6.54□□□□□ -1.36
HMGB1P20-201ENST00000402555 IL17RAQ96F46 866 aa6.54□□□□□ -1.36
HMGB1P20-201ENST00000402555 PHOX2BQ99453 314 aa6.54□□□□□ -1.36
HMGB1P20-201ENST00000402555 FAM49AQ9H0Q0 323 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P20-201ENST00000402555 CERS4Q9HA82 394 aa6.54□□□□□ -1.36
HMGB1P20-201ENST00000402555 SLC28A3Q9HAS3 691 aa6.54□□□□□ -1.36
HMGB1P20-201ENST00000402555 ORC3Q9UBD5 711 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P20-201ENST00000402555 TUBE1Q9UJT0 475 aa6.54□□□□□ -1.36
HMGB1P20-201ENST00000402555 SIP14410 1827 aa6.54□□□□□ -1.36
HMGB1P20-201ENST00000402555 BRWD1Q9NSI6 2320 aa6.54□□□□□ -1.36
HMGB1P20-201ENST00000402555 MICAL3Q7RTP6 2002 aa6.54□□□□□ -1.36
HMGB1P20-201ENST00000402555 STK36Q9NRP7 1315 aa6.53□□□□□ -1.36
HMGB1P20-201ENST00000402555 MYH9P35579 1960 aaKnown RBP6.53□□□□□ -1.36
HMGB1P20-201ENST00000402555 UNC80Q8N2C7 3258 aa6.53□□□□□ -1.36
HMGB1P20-201ENST00000402555 WDR81Q562E7 1941 aa6.53□□□□□ -1.36
HMGB1P20-201ENST00000402555 IGKV6D-21A0A0A0MT36 114 aa6.53□□□□□ -1.36
HMGB1P20-201ENST00000402555 MBLAC1A4D2B0 266 aaPredicted RBP6.53□□□□□ -1.36
HMGB1P20-201ENST00000402555 RFXAPO00287 272 aa6.53□□□□□ -1.36
HMGB1P20-201ENST00000402555 CHMP2AO43633 222 aa6.53□□□□□ -1.36
HMGB1P20-201ENST00000402555 CDKL5O76039 1030 aa6.53□□□□□ -1.36
HMGB1P20-201ENST00000402555 BAIAP3O94812 1187 aa6.53□□□□□ -1.36
HMGB1P20-201ENST00000402555 CHRNA1P02708 482 aa6.53□□□□□ -1.36
HMGB1P20-201ENST00000402555 GHRP10912 638 aa6.53□□□□□ -1.36
HMGB1P20-201ENST00000402555 ATP4AP20648 1035 aa6.53□□□□□ -1.36
HMGB1P20-201ENST00000402555 SETQ01105 290 aaPredicted RBP6.53□□□□□ -1.36
HMGB1P20-201ENST00000402555 TMEM62Q0P6H9 643 aa6.53□□□□□ -1.36
HMGB1P20-201ENST00000402555 IKBKEQ14164 716 aa6.53□□□□□ -1.36
HMGB1P20-201ENST00000402555 ADGRE1Q14246 886 aa6.53□□□□□ -1.36
HMGB1P20-201ENST00000402555 ANKRD1Q15327 319 aa6.53□□□□□ -1.36
HMGB1P20-201ENST00000402555 INF2Q27J81 1249 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms