RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 PKNOX2Q96KN3 472 aa16.91■□□□□ 0.3
CPSF7-202ENST00000394888 TEPSINQ96N21 525 aa16.91■□□□□ 0.3
CPSF7-202ENST00000394888 PSMD1Q99460 953 aa16.91■□□□□ 0.3
CPSF7-202ENST00000394888 STXBP5LQ9Y2K9 1186 aa16.91■□□□□ 0.3
CPSF7-202ENST00000394888 G3V3G9 751 aa16.91■□□□□ 0.3
CPSF7-202ENST00000394888 SLC16A3O15427 465 aaKnown RBP16.91■□□□□ 0.3
CPSF7-202ENST00000394888 EGFRP00533 1210 aa16.91■□□□□ 0.3
CPSF7-202ENST00000394888 INPP5BP32019 993 aa16.91■□□□□ 0.3
CPSF7-202ENST00000394888 C1orf220Q5T0J3 134 aa16.91■□□□□ 0.3
CPSF7-202ENST00000394888 DCAF8Q5TAQ9 597 aa16.91■□□□□ 0.3
CPSF7-202ENST00000394888 VCPKMTQ9H867 229 aa16.91■□□□□ 0.3
CPSF7-202ENST00000394888 PACSIN2Q9UNF0 486 aaPredicted RBP16.91■□□□□ 0.3
CPSF7-202ENST00000394888 RABGAP1Q9Y3P9 1069 aa16.91■□□□□ 0.3
CPSF7-202ENST00000394888 ATP8B3O60423 1300 aa16.91■□□□□ 0.3
CPSF7-202ENST00000394888 PTPRFP10586 1907 aa16.9■□□□□ 0.3
CPSF7-202ENST00000394888 PPIP5K2O43314 1243 aa16.9■□□□□ 0.3
CPSF7-202ENST00000394888 LRRN2O75325 713 aa16.9■□□□□ 0.3
CPSF7-202ENST00000394888 TNFRSF8P28908 595 aa16.9■□□□□ 0.3
CPSF7-202ENST00000394888 ECHS1P30084 290 aa16.9■□□□□ 0.3
CPSF7-202ENST00000394888 CAP2P40123 477 aa16.9■□□□□ 0.3
CPSF7-202ENST00000394888 TSEN2Q8NCE0 465 aaKnown RBP16.9■□□□□ 0.3
CPSF7-202ENST00000394888 TMEM174Q8WUU8 243 aa16.9■□□□□ 0.3
CPSF7-202ENST00000394888 SELENOOQ9BVL4 669 aa16.9■□□□□ 0.3
CPSF7-202ENST00000394888 JADE2Q9NQC1 790 aa16.9■□□□□ 0.3
CPSF7-202ENST00000394888 ADAMTS1Q9UHI8 967 aa16.9■□□□□ 0.3
CPSF7-202ENST00000394888 ZSCAN5CA6NGD5 496 aaPredicted RBP16.9■□□□□ 0.3
CPSF7-202ENST00000394888 CBWD6Q4V339 395 aa16.9■□□□□ 0.3
CPSF7-202ENST00000394888 CBWD3Q5JTY5 395 aa16.9■□□□□ 0.3
CPSF7-202ENST00000394888 CBWD5Q5RIA9 395 aa16.9■□□□□ 0.3
CPSF7-202ENST00000394888 LNX1Q8TBB1 728 aaPredicted RBP16.9■□□□□ 0.3
CPSF7-202ENST00000394888 CLIC2O15247 247 aa16.9■□□□□ 0.3
CPSF7-202ENST00000394888 EIF3DO15371 548 aaKnown RBP eCLIP16.9■□□□□ 0.3
CPSF7-202ENST00000394888 AKR1B10O60218 316 aa16.9■□□□□ 0.3
CPSF7-202ENST00000394888 RAD17O75943 681 aa16.9■□□□□ 0.3
CPSF7-202ENST00000394888 TRADDQ15628 312 aa16.9■□□□□ 0.3
CPSF7-202ENST00000394888 IQCEQ6IPM2 695 aa16.9■□□□□ 0.3
CPSF7-202ENST00000394888 ZNF720Q7Z2F6 126 aa16.9■□□□□ 0.3
CPSF7-202ENST00000394888 ZSWIM2Q8NEG5 633 aa16.9■□□□□ 0.3
CPSF7-202ENST00000394888 SCAF8Q9UPN6 1271 aaKnown RBP16.9■□□□□ 0.3
CPSF7-202ENST00000394888 SLC7A5Q01650 507 aa16.89■□□□□ 0.29
CPSF7-202ENST00000394888 ITGB3BPQ13352 177 aaPredicted RBP16.89■□□□□ 0.29
CPSF7-202ENST00000394888 SLC9C1Q4G0N8 1177 aa16.89■□□□□ 0.29
CPSF7-202ENST00000394888 CCDC174Q6PII3 467 aa16.89■□□□□ 0.29
CPSF7-202ENST00000394888 PIK3R5Q8WYR1 880 aa16.89■□□□□ 0.29
CPSF7-202ENST00000394888 GDAP1L1Q96MZ0 367 aa16.89■□□□□ 0.29
CPSF7-202ENST00000394888 TANGO6Q9C0B7 1094 aa16.89■□□□□ 0.29
CPSF7-202ENST00000394888 GOLPH3Q9H4A6 298 aa16.89■□□□□ 0.29
CPSF7-202ENST00000394888 HYOU1Q9Y4L1 999 aa16.89■□□□□ 0.29
CPSF7-202ENST00000394888 AFPP02771 609 aaKnown RBP16.89■□□□□ 0.29
CPSF7-202ENST00000394888 GLI1P08151 1106 aa16.89■□□□□ 0.29
CPSF7-202ENST00000394888 CKAP4Q07065 602 aaKnown RBP16.89■□□□□ 0.29
CPSF7-202ENST00000394888 SLFN11Q7Z7L1 901 aa16.89■□□□□ 0.29
CPSF7-202ENST00000394888 EXOC4Q96A65 974 aa16.89■□□□□ 0.29
CPSF7-202ENST00000394888 SH3GL2Q99962 352 aa16.89■□□□□ 0.29
CPSF7-202ENST00000394888 NAGPAQ9UK23 515 aa16.89■□□□□ 0.29
CPSF7-202ENST00000394888 DDX3XO00571 662 aaKnown RBP eCLIP16.89■□□□□ 0.291e-6■■■■□ 20.9
CPSF7-202ENST00000394888 TACC1O75410 805 aa16.89■□□□□ 0.29
CPSF7-202ENST00000394888 MRPS9P82933 396 aaKnown RBP16.89■□□□□ 0.29
CPSF7-202ENST00000394888 TEX2Q8IWB9 1127 aa16.89■□□□□ 0.29
CPSF7-202ENST00000394888 AGBL1Q96MI9 1066 aa16.89■□□□□ 0.29
CPSF7-202ENST00000394888 NUCKS1Q9H1E3 243 aaKnown RBP16.89■□□□□ 0.29
CPSF7-202ENST00000394888 ZNF277Q9NRM2 450 aaPredicted RBP16.89■□□□□ 0.29
CPSF7-202ENST00000394888 IGSF9BQ9UPX0 1349 aa16.88■□□□□ 0.29
CPSF7-202ENST00000394888 FTCDO95954 541 aa16.88■□□□□ 0.29
CPSF7-202ENST00000394888 KCTD17Q8N5Z5 321 aa16.88■□□□□ 0.29
CPSF7-202ENST00000394888 GDF3Q9NR23 364 aa16.88■□□□□ 0.29
CPSF7-202ENST00000394888 GTPBP10A4D1E9 387 aaKnown RBP16.88■□□□□ 0.29
CPSF7-202ENST00000394888 CETN3O15182 167 aa16.88■□□□□ 0.29
CPSF7-202ENST00000394888 CFBP00751 764 aa16.88■□□□□ 0.29
CPSF7-202ENST00000394888 PRELPP51888 382 aa16.88■□□□□ 0.29
CPSF7-202ENST00000394888 KCTD19Q17RG1 926 aaPredicted RBP16.88■□□□□ 0.29
CPSF7-202ENST00000394888 CEP55Q53EZ4 464 aa16.88■□□□□ 0.29
CPSF7-202ENST00000394888 PLEKHO2Q8TD55 490 aa16.88■□□□□ 0.29
CPSF7-202ENST00000394888 BMP2KQ9NSY1 1161 aaPredicted RBP16.88■□□□□ 0.29
CPSF7-202ENST00000394888 TISP43B9A030 160 aa16.88■□□□□ 0.29
CPSF7-202ENST00000394888 TUBBP07437 444 aa16.88■□□□□ 0.29
CPSF7-202ENST00000394888 HNRNPH2P55795 449 aaKnown RBP16.88■□□□□ 0.29
CPSF7-202ENST00000394888 LRCH2Q5VUJ6 765 aa16.88■□□□□ 0.29
CPSF7-202ENST00000394888 MIGA2Q7L4E1 593 aa16.88■□□□□ 0.29
CPSF7-202ENST00000394888 CACNA2D4Q7Z3S7 1137 aa16.88■□□□□ 0.29
CPSF7-202ENST00000394888 ARMCX3Q9UH62 379 aaPredicted RBP16.88■□□□□ 0.29
CPSF7-202ENST00000394888 NFIBO00712 420 aa16.87■□□□□ 0.29
CPSF7-202ENST00000394888 RAPGEF1Q13905 1077 aa16.87■□□□□ 0.29
CPSF7-202ENST00000394888 FKBP1CQ5VVH2 108 aa16.87■□□□□ 0.29
CPSF7-202ENST00000394888 LDHDQ86WU2 507 aa16.87■□□□□ 0.29
CPSF7-202ENST00000394888 ERICH4A6NGS2 130 aa16.87■□□□□ 0.29
CPSF7-202ENST00000394888 USO1O60763 962 aaKnown RBP16.87■□□□□ 0.29
CPSF7-202ENST00000394888 TCP1P17987 556 aaKnown RBP16.87■□□□□ 0.29
CPSF7-202ENST00000394888 NBPF9Q3BBW0 867 aa16.87■□□□□ 0.29
CPSF7-202ENST00000394888 GRIPAP1Q4V328 841 aa16.87■□□□□ 0.29
CPSF7-202ENST00000394888 MARCH6O60337 910 aa16.86■□□□□ 0.29
CPSF7-202ENST00000394888 PALB2Q86YC2 1186 aa16.86■□□□□ 0.29
CPSF7-202ENST00000394888 ERMNQ8TAM6 284 aa16.86■□□□□ 0.29
CPSF7-202ENST00000394888 MGAMO43451 1857 aa16.86■□□□□ 0.29
CPSF7-202ENST00000394888 FAM153BP0C7A2 387 aa16.86■□□□□ 0.29
CPSF7-202ENST00000394888 GGCXP38435 758 aa16.86■□□□□ 0.29
CPSF7-202ENST00000394888 FAM153CQ494X1 144 aa16.86■□□□□ 0.29
CPSF7-202ENST00000394888 WDR11Q9BZH6 1224 aa16.86■□□□□ 0.29
CPSF7-202ENST00000394888 AGPAT3Q9NRZ7 376 aa16.86■□□□□ 0.29
CPSF7-202ENST00000394888 FAM153AQ9UHL3 310 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms