RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 ANKRD2Q9GZV1 360 aa18.22■□□□□ 0.51
SIPA1-201ENST00000394224 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.22■□□□□ 0.51
SIPA1-201ENST00000394224 CYP11B2P19099 503 aa18.22■□□□□ 0.51
SIPA1-201ENST00000394224 SF3B3Q15393 1217 aaKnown RBP18.22■□□□□ 0.51
SIPA1-201ENST00000394224 SBK1Q52WX2 424 aa18.22■□□□□ 0.51
SIPA1-201ENST00000394224 KDM7AQ6ZMT4 941 aa18.22■□□□□ 0.51
SIPA1-201ENST00000394224 ZFPM1Q8IX07 1006 aa18.22■□□□□ 0.51
SIPA1-201ENST00000394224 EPS8L3Q8TE67 593 aaKnown RBP18.22■□□□□ 0.51
SIPA1-201ENST00000394224 ZNF287Q9HBT7 754 aa18.22■□□□□ 0.51
SIPA1-201ENST00000394224 ODF2LQ9ULJ1 636 aa18.22■□□□□ 0.51
SIPA1-201ENST00000394224 MYL1P05976 194 aa18.21■□□□□ 0.51
SIPA1-201ENST00000394224 EPC2Q52LR7 807 aa18.21■□□□□ 0.51
SIPA1-201ENST00000394224 KIAA0825Q8IV33 1275 aa18.21■□□□□ 0.51
SIPA1-201ENST00000394224 SLC35G2Q8TBE7 412 aa18.21■□□□□ 0.51
SIPA1-201ENST00000394224 CAVIN3Q969G5 261 aa18.21■□□□□ 0.51
SIPA1-201ENST00000394224 ZNF622Q969S3 477 aaKnown RBP eCLIP18.21■□□□□ 0.51
SIPA1-201ENST00000394224 HOOK2Q96ED9 719 aa18.21■□□□□ 0.51
SIPA1-201ENST00000394224 IGSF9BQ9UPX0 1349 aa18.21■□□□□ 0.51
SIPA1-201ENST00000394224 FAM107AO95990 144 aa18.21■□□□□ 0.51
SIPA1-201ENST00000394224 CFBP00751 764 aa18.21■□□□□ 0.51
SIPA1-201ENST00000394224 PCP11498 1178 aaKnown RBP18.21■□□□□ 0.51
SIPA1-201ENST00000394224 PON1P27169 355 aa18.21■□□□□ 0.51
SIPA1-201ENST00000394224 PEX19P40855 299 aa18.21■□□□□ 0.51
SIPA1-201ENST00000394224 CATSPER3Q86XQ3 398 aa18.21■□□□□ 0.51
SIPA1-201ENST00000394224 FBXO25Q8TCJ0 367 aa18.21■□□□□ 0.51
SIPA1-201ENST00000394224 ARHGEF1Q92888 912 aaKnown RBP18.21■□□□□ 0.51
SIPA1-201ENST00000394224 FMO2Q99518 471 aa18.21■□□□□ 0.51
SIPA1-201ENST00000394224 CD209Q9NNX6 404 aa18.21■□□□□ 0.51
SIPA1-201ENST00000394224 GLI3P10071 1580 aa18.21■□□□□ 0.51
SIPA1-201ENST00000394224 CHD4Q14839 1912 aa18.21■□□□□ 0.51
SIPA1-201ENST00000394224 PVALEFA0A1B0GWK0 134 aa18.21■□□□□ 0.5
SIPA1-201ENST00000394224 PIAS1O75925 651 aa18.21■□□□□ 0.5
SIPA1-201ENST00000394224 AFPP02771 609 aaKnown RBP18.21■□□□□ 0.5
SIPA1-201ENST00000394224 MMEP08473 750 aa18.21■□□□□ 0.5
SIPA1-201ENST00000394224 CHN1P15882 459 aa18.21■□□□□ 0.5
SIPA1-201ENST00000394224 NFIAQ12857 509 aa18.21■□□□□ 0.5
SIPA1-201ENST00000394224 SLC29A2Q14542 456 aa18.21■□□□□ 0.5
SIPA1-201ENST00000394224 ZKSCAN4Q969J2 545 aaPredicted RBP18.21■□□□□ 0.5
SIPA1-201ENST00000394224 ARHGEF26Q96DR7 871 aa18.21■□□□□ 0.5
SIPA1-201ENST00000394224 THAP2Q9H0W7 228 aa18.21■□□□□ 0.5
SIPA1-201ENST00000394224 TMBIM4Q9HC24 238 aa18.21■□□□□ 0.5
SIPA1-201ENST00000394224 DDX4Q9NQI0 724 aaKnown RBP18.21■□□□□ 0.5
SIPA1-201ENST00000394224 STK17AQ9UEE5 414 aa18.21■□□□□ 0.5
SIPA1-201ENST00000394224 EVI5O60447 810 aa18.2■□□□□ 0.5
SIPA1-201ENST00000394224 FLOT1O75955 427 aa18.2■□□□□ 0.5
SIPA1-201ENST00000394224 LDHCP07864 332 aa18.2■□□□□ 0.5
SIPA1-201ENST00000394224 MRPL12P52815 198 aaKnown RBP18.2■□□□□ 0.5
SIPA1-201ENST00000394224 GKAP1Q5VSY0 366 aaPredicted RBP18.2■□□□□ 0.5
SIPA1-201ENST00000394224 KCNV2Q8TDN2 545 aa18.2■□□□□ 0.5
SIPA1-201ENST00000394224 RUSC1Q9BVN2 902 aa18.2■□□□□ 0.5
SIPA1-201ENST00000394224 USP40Q9NVE5 1235 aa18.2■□□□□ 0.5
SIPA1-201ENST00000394224 GOLGA8IPA6NC78 632 aa18.2■□□□□ 0.5
SIPA1-201ENST00000394224 GOLGA8JA6NMD2 632 aa18.2■□□□□ 0.5
SIPA1-201ENST00000394224 CREB1P16220 341 aa18.2■□□□□ 0.5
SIPA1-201ENST00000394224 YY1P25490 414 aa18.2■□□□□ 0.5
SIPA1-201ENST00000394224 PPP2R2AP63151 447 aa18.2■□□□□ 0.5
SIPA1-201ENST00000394224 VPS36Q86VN1 386 aa18.2■□□□□ 0.5
SIPA1-201ENST00000394224 TRIM59Q8IWR1 403 aa18.2■□□□□ 0.5
SIPA1-201ENST00000394224 CNBD1Q8NA66 436 aa18.2■□□□□ 0.5
SIPA1-201ENST00000394224 HVCN1Q96D96 273 aa18.2■□□□□ 0.5
SIPA1-201ENST00000394224 SEMA4AQ9H3S1 761 aa18.2■□□□□ 0.5
SIPA1-201ENST00000394224 AMFRQ9UKV5 643 aa18.2■□□□□ 0.5
SIPA1-201ENST00000394224 DNM3Q9UQ16 869 aa18.2■□□□□ 0.5
SIPA1-201ENST00000394224 ARSHQ5FYA8 562 aa18.19■□□□□ 0.5
SIPA1-201ENST00000394224 RNF10Q8N5U6 811 aaKnown RBP18.19■□□□□ 0.5
SIPA1-201ENST00000394224 TPCN2Q8NHX9 752 aa18.19■□□□□ 0.5
SIPA1-201ENST00000394224 WHAMMQ8TF30 809 aa18.19■□□□□ 0.5
SIPA1-201ENST00000394224 LRRC45Q96CN5 670 aa18.19■□□□□ 0.5
SIPA1-201ENST00000394224 PLCB1Q9NQ66 1216 aa18.19■□□□□ 0.5
SIPA1-201ENST00000394224 KCNQ5Q9NR82 932 aa18.19■□□□□ 0.5
SIPA1-201ENST00000394224 MTMR4Q9NYA4 1195 aa18.19■□□□□ 0.5
SIPA1-201ENST00000394224 CCNL1Q9UK58 526 aaPredicted RBP18.19■□□□□ 0.5
SIPA1-201ENST00000394224 LRP6O75581 1613 aa18.19■□□□□ 0.5
SIPA1-201ENST00000394224 DUOX1Q9NRD9 1551 aa18.19■□□□□ 0.5
SIPA1-201ENST00000394224 SSU72P8A0A1W2PR75 194 aa18.19■□□□□ 0.5
SIPA1-201ENST00000394224 HMGB1P1B2RPK0 211 aaPredicted RBP18.19■□□□□ 0.5
SIPA1-201ENST00000394224 LONRF1Q17RB8 773 aa18.19■□□□□ 0.5
SIPA1-201ENST00000394224 FIGNQ5HY92 759 aa18.19■□□□□ 0.5
SIPA1-201ENST00000394224 CCDC105Q8IYK2 499 aa18.19■□□□□ 0.5
SIPA1-201ENST00000394224 NEDD1Q8NHV4 660 aa18.19■□□□□ 0.5
SIPA1-201ENST00000394224 PRCCQ92733 491 aaPredicted RBP18.19■□□□□ 0.5
SIPA1-201ENST00000394224 SPZ1Q9BXG8 430 aa18.19■□□□□ 0.5
SIPA1-201ENST00000394224 RTFDC1Q9BY42 306 aaPredicted RBP18.19■□□□□ 0.5
SIPA1-201ENST00000394224 RIC8AQ9NPQ8 531 aa18.19■□□□□ 0.5
SIPA1-201ENST00000394224 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.19■□□□□ 0.5
SIPA1-201ENST00000394224 NUP188Q5SRE5 1749 aa18.19■□□□□ 0.5
SIPA1-201ENST00000394224 DDX3XO00571 662 aaKnown RBP eCLIP18.19■□□□□ 0.54e-14■■■□□ 15.5
SIPA1-201ENST00000394224 CLNS1AP54105 237 aaKnown RBP18.19■□□□□ 0.5
SIPA1-201ENST00000394224 QRICH1Q2TAL8 776 aa18.19■□□□□ 0.5
SIPA1-201ENST00000394224 ACCSLQ4AC99 568 aa18.19■□□□□ 0.5
SIPA1-201ENST00000394224 PRUNE1Q86TP1 453 aa18.19■□□□□ 0.5
SIPA1-201ENST00000394224 SLC20A1Q8WUM9 679 aa18.19■□□□□ 0.5
SIPA1-201ENST00000394224 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.19■□□□□ 0.56e-7■■■■□ 21.4
SIPA1-201ENST00000394224 CEP83Q9Y592 693 aa18.19■□□□□ 0.5
SIPA1-201ENST00000394224 STAT1P42224 750 aa18.18■□□□□ 0.5
SIPA1-201ENST00000394224 DRAP1Q14919 205 aaPredicted RBP18.18■□□□□ 0.5
SIPA1-201ENST00000394224 CYB5D1Q6P9G0 228 aa18.18■□□□□ 0.5
SIPA1-201ENST00000394224 CCDC174Q6PII3 467 aa18.18■□□□□ 0.5
SIPA1-201ENST00000394224 KRT35Q92764 455 aa18.18■□□□□ 0.5
SIPA1-201ENST00000394224 CCDC127Q96BQ5 260 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms