RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 C8orf76Q96K31 380 aa11.64□□□□□ -0.55
COL5A1-202ENST00000371820 SLC26A6Q9BXS9 759 aa11.64□□□□□ -0.55
COL5A1-202ENST00000371820 SMARCAD1Q9H4L7 1026 aa11.64□□□□□ -0.55
COL5A1-202ENST00000371820 JPH1Q9HDC5 661 aaPredicted RBP11.64□□□□□ -0.55
COL5A1-202ENST00000371820 SH3GLB2Q9NR46 395 aa11.64□□□□□ -0.55
COL5A1-202ENST00000371820 ERAP1Q9NZ08 941 aa11.64□□□□□ -0.55
COL5A1-202ENST00000371820 TCEAL9Q9UHQ7 104 aa11.64□□□□□ -0.55
COL5A1-202ENST00000371820 NRCAMQ92823 1304 aa11.63□□□□□ -0.55
COL5A1-202ENST00000371820 TRIP12Q14669 1992 aaPredicted RBP11.63□□□□□ -0.55
COL5A1-202ENST00000371820 COL4A4P53420 1690 aaPredicted RBP11.63□□□□□ -0.55
COL5A1-202ENST00000371820 NCOR1O75376 2440 aa11.63□□□□□ -0.55
COL5A1-202ENST00000371820 NR1I2O75469 434 aa11.63□□□□□ -0.55
COL5A1-202ENST00000371820 ARHGEF15O94989 841 aa11.63□□□□□ -0.55
COL5A1-202ENST00000371820 DEXIO95424 95 aa11.63□□□□□ -0.55
COL5A1-202ENST00000371820 RPLP2P05387 115 aaKnown RBP11.63□□□□□ -0.55
COL5A1-202ENST00000371820 SMIM10L2AP0DMW4 78 aa11.63□□□□□ -0.55
COL5A1-202ENST00000371820 SMIM10L2BP0DMW5 78 aa11.63□□□□□ -0.55
COL5A1-202ENST00000371820 KCNJ6P48051 423 aa11.63□□□□□ -0.55
COL5A1-202ENST00000371820 ME1P48163 572 aa11.63□□□□□ -0.55
COL5A1-202ENST00000371820 CCT2P78371 535 aaKnown RBP11.63□□□□□ -0.55
COL5A1-202ENST00000371820 ARHGAP4P98171 946 aa11.63□□□□□ -0.55
COL5A1-202ENST00000371820 SETQ01105 290 aaPredicted RBP11.63□□□□□ -0.55
COL5A1-202ENST00000371820 TAP1Q03518 808 aa11.63□□□□□ -0.55
COL5A1-202ENST00000371820 SSRP1Q08945 709 aaKnown RBP11.63□□□□□ -0.55
COL5A1-202ENST00000371820 GPNMBQ14956 572 aa11.63□□□□□ -0.55
COL5A1-202ENST00000371820 STK38Q15208 465 aa11.63□□□□□ -0.55
COL5A1-202ENST00000371820 NTRK3Q16288 839 aa11.63□□□□□ -0.55
COL5A1-202ENST00000371820 CAMK4Q16566 473 aa11.63□□□□□ -0.55
COL5A1-202ENST00000371820 CCDC186Q7Z3E2 898 aa11.63□□□□□ -0.55
COL5A1-202ENST00000371820 SERINC5Q86VE9 423 aa11.63□□□□□ -0.55
COL5A1-202ENST00000371820 MICALL1Q8N3F8 863 aa11.63□□□□□ -0.55
COL5A1-202ENST00000371820 GLG1Q92896 1179 aa11.63□□□□□ -0.55
COL5A1-202ENST00000371820 PHKBQ93100 1093 aa11.63□□□□□ -0.55
COL5A1-202ENST00000371820 AZI2Q9H6S1 392 aa11.63□□□□□ -0.55
COL5A1-202ENST00000371820 KCNH7Q9NS40 1196 aa11.63□□□□□ -0.55
COL5A1-202ENST00000371820 SLC9A2Q9UBY0 812 aa11.63□□□□□ -0.55
COL5A1-202ENST00000371820 PRRC2BQ5JSZ5 2229 aaKnown RBP11.63□□□□□ -0.55
COL5A1-202ENST00000371820 REV3LO60673 3130 aa11.62□□□□□ -0.55
COL5A1-202ENST00000371820 DOCK5Q9H7D0 1870 aa11.62□□□□□ -0.55
COL5A1-202ENST00000371820 EPOPA6NHQ4 379 aa11.62□□□□□ -0.55
COL5A1-202ENST00000371820 KIF28PB7ZC32 967 aa11.62□□□□□ -0.55
COL5A1-202ENST00000371820 RFXAPO00287 272 aa11.62□□□□□ -0.55
COL5A1-202ENST00000371820 CBFA2T2O43439 604 aa11.62□□□□□ -0.55
COL5A1-202ENST00000371820 JAK2O60674 1132 aa11.62□□□□□ -0.55
COL5A1-202ENST00000371820 ATP9AO75110 1047 aa11.62□□□□□ -0.55
COL5A1-202ENST00000371820 HOXC8P31273 242 aa11.62□□□□□ -0.55
COL5A1-202ENST00000371820 TRIM29Q14134 588 aa11.62□□□□□ -0.55
COL5A1-202ENST00000371820 PKN1Q16512 942 aa11.62□□□□□ -0.55
COL5A1-202ENST00000371820 JAKMIP3Q5VZ66 844 aa11.62□□□□□ -0.55
COL5A1-202ENST00000371820 CNKSR3Q6P9H4 555 aa11.62□□□□□ -0.55
COL5A1-202ENST00000371820 CKAP2LQ8IYA6 745 aa11.62□□□□□ -0.55
COL5A1-202ENST00000371820 ENGASEQ8NFI3 743 aa11.62□□□□□ -0.55
COL5A1-202ENST00000371820 FBXO18Q8NFZ0 1043 aa11.62□□□□□ -0.55
COL5A1-202ENST00000371820 UHRF1Q96T88 793 aaPredicted RBP11.62□□□□□ -0.55
COL5A1-202ENST00000371820 CCDC94Q9BW85 323 aaPredicted RBP11.62□□□□□ -0.55
COL5A1-202ENST00000371820 TSPYL2Q9H2G4 693 aaPredicted RBP11.62□□□□□ -0.55
COL5A1-202ENST00000371820 RNPEPQ9H4A4 650 aa11.62□□□□□ -0.55
COL5A1-202ENST00000371820 CERS4Q9HA82 394 aa11.62□□□□□ -0.55
COL5A1-202ENST00000371820 TMEM260Q9NX78 707 aa11.62□□□□□ -0.55
COL5A1-202ENST00000371820 PKD2L1Q9P0L9 805 aa11.62□□□□□ -0.55
COL5A1-202ENST00000371820 MTCH2Q9Y6C9 303 aa11.62□□□□□ -0.55
COL5A1-202ENST00000371820 ABHD14A-ACY1A0A1B0GW23 586 aa11.61□□□□□ -0.55
COL5A1-202ENST00000371820 RSPH10B2B2RC85 870 aa11.61□□□□□ -0.55
COL5A1-202ENST00000371820 MEIS1O00470 390 aa11.61□□□□□ -0.55
COL5A1-202ENST00000371820 SPTLC2O15270 562 aa11.61□□□□□ -0.55
COL5A1-202ENST00000371820 GTPBP6O43824 516 aaPredicted RBP11.61□□□□□ -0.55
COL5A1-202ENST00000371820 NBNO60934 754 aa11.61□□□□□ -0.55
COL5A1-202ENST00000371820 PPP6R2O75170 966 aa11.61□□□□□ -0.55
COL5A1-202ENST00000371820 CXCL10P02778 98 aa11.61□□□□□ -0.55
COL5A1-202ENST00000371820 CYP3A4P08684 503 aa11.61□□□□□ -0.55
COL5A1-202ENST00000371820 RSPH10BP0C881 870 aa11.61□□□□□ -0.55
COL5A1-202ENST00000371820 XBP1P17861 261 aa11.61□□□□□ -0.55
COL5A1-202ENST00000371820 CMA1P23946 247 aa11.61□□□□□ -0.55
COL5A1-202ENST00000371820 THPOP40225 353 aa11.61□□□□□ -0.55
COL5A1-202ENST00000371820 SLC26A2P50443 739 aa11.61□□□□□ -0.55
COL5A1-202ENST00000371820 NLRP5P59047 1200 aa11.61□□□□□ -0.55
COL5A1-202ENST00000371820 WDR5P61964 334 aaKnown RBP11.61□□□□□ -0.55
COL5A1-202ENST00000371820 IQCB1Q15051 598 aa11.61□□□□□ -0.55
COL5A1-202ENST00000371820 TRIM71Q2Q1W2 868 aaKnown RBP11.61□□□□□ -0.55
COL5A1-202ENST00000371820 CT47A1Q5JQC4 288 aaPredicted RBP11.61□□□□□ -0.55
COL5A1-202ENST00000371820 GALNT17Q6IS24 598 aa11.61□□□□□ -0.55
COL5A1-202ENST00000371820 TAF2Q6P1X5 1199 aa11.61□□□□□ -0.55
COL5A1-202ENST00000371820 RSPH3Q86UC2 560 aa11.61□□□□□ -0.55
COL5A1-202ENST00000371820 LUZP1Q86V48 1076 aa11.61□□□□□ -0.55
COL5A1-202ENST00000371820 TRIM50Q86XT4 487 aa11.61□□□□□ -0.55
COL5A1-202ENST00000371820 FSIP1Q8NA03 581 aa11.61□□□□□ -0.55
COL5A1-202ENST00000371820 ARNTL2Q8WYA1 636 aa11.61□□□□□ -0.55
COL5A1-202ENST00000371820 BCAS3Q9H6U6 928 aa11.61□□□□□ -0.55
COL5A1-202ENST00000371820 NCOA5Q9HCD5 579 aaKnown RBP11.61□□□□□ -0.55
COL5A1-202ENST00000371820 AGO4Q9HCK5 861 aaKnown RBP11.61□□□□□ -0.55
COL5A1-202ENST00000371820 BDP1A6H8Y1 2624 aa11.6□□□□□ -0.55
COL5A1-202ENST00000371820 GSTTP1A0A1W2PQM5 241 aa11.6□□□□□ -0.55
COL5A1-202ENST00000371820 RRN3P2A6NIE6 340 aa11.6□□□□□ -0.55
COL5A1-202ENST00000371820 TREHO43280 583 aa11.6□□□□□ -0.55
COL5A1-202ENST00000371820 CTIFO43310 598 aaKnown RBP11.6□□□□□ -0.55
COL5A1-202ENST00000371820 TLL1O43897 1013 aa11.6□□□□□ -0.55
COL5A1-202ENST00000371820 LGR5O75473 907 aa11.6□□□□□ -0.55
COL5A1-202ENST00000371820 DEFB103AP81534 67 aa11.6□□□□□ -0.55
COL5A1-202ENST00000371820 ZNF200P98182 395 aaPredicted RBP11.6□□□□□ -0.55
COL5A1-202ENST00000371820 TFF2Q03403 129 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms