RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 GOLGA8MH3BSY2 632 aa9.87□□□□□ -0.83
SMARCA1-202ENST00000371122 RPSAP08865 295 aaKnown RBP9.87□□□□□ -0.83
SMARCA1-202ENST00000371122 PTK2Q05397 1052 aa9.87□□□□□ -0.83
SMARCA1-202ENST00000371122 B4GALNT4Q76KP1 1039 aa9.87□□□□□ -0.83
SMARCA1-202ENST00000371122 RSAD2Q8WXG1 361 aa9.87□□□□□ -0.83
SMARCA1-202ENST00000371122 SLC7A3Q8WY07 619 aa9.87□□□□□ -0.83
SMARCA1-202ENST00000371122 NACC1Q96RE7 527 aa9.87□□□□□ -0.83
SMARCA1-202ENST00000371122 PHF20Q9BVI0 1012 aa9.87□□□□□ -0.83
SMARCA1-202ENST00000371122 RAB17Q9H0T7 212 aa9.87□□□□□ -0.83
SMARCA1-202ENST00000371122 THAP9Q9H5L6 903 aa9.87□□□□□ -0.83
SMARCA1-202ENST00000371122 RIC8AQ9NPQ8 531 aa9.87□□□□□ -0.83
SMARCA1-202ENST00000371122 RREB1Q92766 1687 aa9.87□□□□□ -0.83
SMARCA1-202ENST00000371122 LAD1O00515 517 aa9.87□□□□□ -0.83
SMARCA1-202ENST00000371122 CTNND1O60716 968 aaKnown RBP9.87□□□□□ -0.83
SMARCA1-202ENST00000371122 NR3C1P04150 777 aa9.87□□□□□ -0.83
SMARCA1-202ENST00000371122 RASA1P20936 1047 aa9.87□□□□□ -0.83
SMARCA1-202ENST00000371122 COPB2P35606 906 aa9.87□□□□□ -0.83
SMARCA1-202ENST00000371122 GRM4Q14833 912 aa9.87□□□□□ -0.83
SMARCA1-202ENST00000371122 CCDC13Q8IYE1 715 aa9.87□□□□□ -0.83
SMARCA1-202ENST00000371122 NEDD1Q8NHV4 660 aa9.87□□□□□ -0.83
SMARCA1-202ENST00000371122 CCDC110Q8TBZ0 833 aa9.87□□□□□ -0.83
SMARCA1-202ENST00000371122 SPIRE2Q8WWL2 714 aa9.87□□□□□ -0.83
SMARCA1-202ENST00000371122 FAM49AQ9H0Q0 323 aaPredicted RBP9.87□□□□□ -0.83
SMARCA1-202ENST00000371122 PIK3R2O00459 728 aa9.86□□□□□ -0.83
SMARCA1-202ENST00000371122 TNFAIP1Q13829 316 aa9.86□□□□□ -0.83
SMARCA1-202ENST00000371122 CCDC38Q502W7 563 aa9.86□□□□□ -0.83
SMARCA1-202ENST00000371122 C2CD6Q53TS8 623 aa9.86□□□□□ -0.83
SMARCA1-202ENST00000371122 CFAP157Q5JU67 520 aa9.86□□□□□ -0.83
SMARCA1-202ENST00000371122 PALM2Q8IXS6 379 aa9.86□□□□□ -0.83
SMARCA1-202ENST00000371122 RILPQ96NA2 401 aa9.86□□□□□ -0.83
SMARCA1-202ENST00000371122 GGT7Q9UJ14 662 aa9.86□□□□□ -0.83
SMARCA1-202ENST00000371122 G3BP2Q9UN86 482 aaKnown RBP9.86□□□□□ -0.83
SMARCA1-202ENST00000371122 PGRMC1O00264 195 aaKnown RBP9.86□□□□□ -0.83
SMARCA1-202ENST00000371122 N4BP1O75113 896 aaKnown RBP9.86□□□□□ -0.83
SMARCA1-202ENST00000371122 ZSCAN20P17040 1043 aaPredicted RBP9.86□□□□□ -0.83
SMARCA1-202ENST00000371122 SLC9A1P19634 815 aa9.86□□□□□ -0.83
SMARCA1-202ENST00000371122 APBA1Q02410 837 aa9.86□□□□□ -0.83
SMARCA1-202ENST00000371122 BFSP1Q12934 665 aa9.86□□□□□ -0.83
SMARCA1-202ENST00000371122 GPR162Q16538 588 aa9.86□□□□□ -0.83
SMARCA1-202ENST00000371122 SGO2Q562F6 1265 aa9.86□□□□□ -0.83
SMARCA1-202ENST00000371122 FAM133BQ5BKY9 247 aaKnown RBP9.86□□□□□ -0.83
SMARCA1-202ENST00000371122 GJB7Q6PEY0 223 aa9.86□□□□□ -0.83
SMARCA1-202ENST00000371122 CDR2LQ86X02 465 aaPredicted RBP9.86□□□□□ -0.83
SMARCA1-202ENST00000371122 ZNF710Q8N1W2 664 aa9.86□□□□□ -0.83
SMARCA1-202ENST00000371122 FAM71BQ8TC56 605 aa9.86□□□□□ -0.83
SMARCA1-202ENST00000371122 CEP63Q96MT8 703 aa9.86□□□□□ -0.83
SMARCA1-202ENST00000371122 LRRC1Q9BTT6 524 aa9.86□□□□□ -0.83
SMARCA1-202ENST00000371122 CUEDC2Q9H467 287 aa9.86□□□□□ -0.83
SMARCA1-202ENST00000371122 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.86□□□□□ -0.832e-7■■■□□ 18.3
SMARCA1-202ENST00000371122 SWAP70Q9UH65 585 aa9.86□□□□□ -0.83
SMARCA1-202ENST00000371122 TSKSQ9UJT2 592 aa9.86□□□□□ -0.83
SMARCA1-202ENST00000371122 RRP15Q9Y3B9 282 aaKnown RBP9.86□□□□□ -0.83
SMARCA1-202ENST00000371122 FLT1P17948 1338 aa9.86□□□□□ -0.83
SMARCA1-202ENST00000371122 DOT1LQ8TEK3 1739 aa9.86□□□□□ -0.83
SMARCA1-202ENST00000371122 LRRD1A4D1F6 860 aa9.86□□□□□ -0.83
SMARCA1-202ENST00000371122 SGK1O00141 431 aa9.86□□□□□ -0.83
SMARCA1-202ENST00000371122 GYPCP04921 128 aa9.86□□□□□ -0.83
SMARCA1-202ENST00000371122 ATP2A2P16615 1042 aaKnown RBP9.86□□□□□ -0.83
SMARCA1-202ENST00000371122 C6orf163Q5TEZ5 329 aa9.86□□□□□ -0.83
SMARCA1-202ENST00000371122 DDX42Q86XP3 938 aaKnown RBP eCLIP9.86□□□□□ -0.83
SMARCA1-202ENST00000371122 ZNF579Q8NAF0 562 aaKnown RBP9.86□□□□□ -0.83
SMARCA1-202ENST00000371122 RAD54LQ92698 747 aa9.86□□□□□ -0.83
SMARCA1-202ENST00000371122 RPGRIP1Q96KN7 1286 aa9.86□□□□□ -0.83
SMARCA1-202ENST00000371122 FAM213AQ9BRX8 229 aa9.86□□□□□ -0.83
SMARCA1-202ENST00000371122 ADD3Q9UEY8 706 aaKnown RBP9.86□□□□□ -0.83
SMARCA1-202ENST00000371122 AKT3Q9Y243 479 aa9.86□□□□□ -0.83
SMARCA1-202ENST00000371122 H7C0C1 242 aa9.85□□□□□ -0.83
SMARCA1-202ENST00000371122 NPR1P16066 1061 aa9.85□□□□□ -0.83
SMARCA1-202ENST00000371122 ATP5OP48047 213 aa9.85□□□□□ -0.83
SMARCA1-202ENST00000371122 YWHAGP61981 247 aaKnown RBP eCLIP9.85□□□□□ -0.83
SMARCA1-202ENST00000371122 PTPAQ15257 358 aa9.85□□□□□ -0.83
SMARCA1-202ENST00000371122 C10orf76Q5T2E6 689 aa9.85□□□□□ -0.83
SMARCA1-202ENST00000371122 TRIM68Q6AZZ1 485 aa9.85□□□□□ -0.83
SMARCA1-202ENST00000371122 PADI6Q6TGC4 694 aa9.85□□□□□ -0.83
SMARCA1-202ENST00000371122 CACNA2D3Q8IZS8 1091 aa9.85□□□□□ -0.83
SMARCA1-202ENST00000371122 MSANTD4Q8NCY6 345 aa9.85□□□□□ -0.83
SMARCA1-202ENST00000371122 RNF25Q96BH1 459 aaPredicted RBP9.85□□□□□ -0.83
SMARCA1-202ENST00000371122 MTMR4Q9NYA4 1195 aa9.85□□□□□ -0.83
SMARCA1-202ENST00000371122 AMACRQ9UHK6 382 aa9.85□□□□□ -0.83
SMARCA1-202ENST00000371122 GCFC2P16383 781 aaKnown RBP9.85□□□□□ -0.83
SMARCA1-202ENST00000371122 CLUL1Q15846 466 aa9.85□□□□□ -0.83
SMARCA1-202ENST00000371122 INTS5Q6P9B9 1019 aaKnown RBP9.85□□□□□ -0.83
SMARCA1-202ENST00000371122 SLC30A5Q8TAD4 765 aa9.85□□□□□ -0.83
SMARCA1-202ENST00000371122 INTS9Q9NV88 658 aaKnown RBP9.85□□□□□ -0.83
SMARCA1-202ENST00000371122 KLHL11Q9NVR0 708 aa9.85□□□□□ -0.83
SMARCA1-202ENST00000371122 STK36Q9NRP7 1315 aa9.85□□□□□ -0.83
SMARCA1-202ENST00000371122 SERPING1P05155 500 aa9.85□□□□□ -0.83
SMARCA1-202ENST00000371122 PCK1P35558 622 aa9.85□□□□□ -0.83
SMARCA1-202ENST00000371122 HDLBPQ00341 1268 aaKnown RBP9.85□□□□□ -0.83
SMARCA1-202ENST00000371122 DRAP1Q14919 205 aaPredicted RBP9.85□□□□□ -0.83
SMARCA1-202ENST00000371122 BRDTQ58F21 947 aaPredicted RBP9.85□□□□□ -0.83
SMARCA1-202ENST00000371122 PPP1R18Q6NYC8 613 aa9.85□□□□□ -0.83
SMARCA1-202ENST00000371122 TMEM179Q6ZVK1 233 aa9.85□□□□□ -0.83
SMARCA1-202ENST00000371122 NME8Q8N427 588 aa9.85□□□□□ -0.83
SMARCA1-202ENST00000371122 TTLL6Q8N841 843 aa9.85□□□□□ -0.83
SMARCA1-202ENST00000371122 OR2W6PQ8NHA6 318 aa9.85□□□□□ -0.83
SMARCA1-202ENST00000371122 WRNIP1Q96S55 665 aa9.85□□□□□ -0.83
SMARCA1-202ENST00000371122 C11orf70Q9BRQ4 267 aa9.85□□□□□ -0.83
SMARCA1-202ENST00000371122 RAB20Q9NX57 234 aa9.85□□□□□ -0.83
SMARCA1-202ENST00000371122 INPP5FQ9Y2H2 1132 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms