RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 CNOT4O95628 575 aaKnown RBP5.99□□□□□ -1.45
RNU6-553P-201ENST00000364047 HMGCRP04035 888 aa5.99□□□□□ -1.45
RNU6-553P-201ENST00000364047 ETV4P43268 484 aa5.99□□□□□ -1.45
RNU6-553P-201ENST00000364047 KCNQ1P51787 676 aa5.99□□□□□ -1.45
RNU6-553P-201ENST00000364047 CD83Q01151 205 aa5.99□□□□□ -1.45
RNU6-553P-201ENST00000364047 KANK2Q63ZY3 851 aa5.99□□□□□ -1.45
RNU6-553P-201ENST00000364047 CALML6Q8TD86 181 aa5.99□□□□□ -1.45
RNU6-553P-201ENST00000364047 PTPN18Q99952 460 aa5.99□□□□□ -1.45
RNU6-553P-201ENST00000364047 ZDHHC5Q9C0B5 715 aa5.99□□□□□ -1.45
RNU6-553P-201ENST00000364047 SMPD4Q9NXE4 827 aa5.99□□□□□ -1.45
RNU6-553P-201ENST00000364047 B4GALT6Q9UBX8 382 aa5.99□□□□□ -1.45
RNU6-553P-201ENST00000364047 CDC42EP3Q9UKI2 254 aa5.99□□□□□ -1.45
RNU6-553P-201ENST00000364047 DVL2O14641 736 aa5.98□□□□□ -1.45
RNU6-553P-201ENST00000364047 KPNA6O60684 536 aa5.98□□□□□ -1.45
RNU6-553P-201ENST00000364047 FNTBP49356 437 aa5.98□□□□□ -1.45
RNU6-553P-201ENST00000364047 NEK4P51957 841 aa5.98□□□□□ -1.45
RNU6-553P-201ENST00000364047 RRADP55042 308 aa5.98□□□□□ -1.45
RNU6-553P-201ENST00000364047 ZNF174Q15697 407 aa5.98□□□□□ -1.45
RNU6-553P-201ENST00000364047 SLFN13Q68D06 897 aa5.98□□□□□ -1.45
RNU6-553P-201ENST00000364047 CIR1Q86X95 450 aaPredicted RBP5.98□□□□□ -1.45
RNU6-553P-201ENST00000364047 KIAA1958Q8N8K9 716 aa5.98□□□□□ -1.45
RNU6-553P-201ENST00000364047 NINJ1Q92982 152 aa5.98□□□□□ -1.45
RNU6-553P-201ENST00000364047 FOXRED1Q96CU9 486 aaPredicted RBP5.98□□□□□ -1.45
RNU6-553P-201ENST00000364047 SAMD11Q96NU1 681 aa5.98□□□□□ -1.45
RNU6-553P-201ENST00000364047 SSBP3Q9BWW4 388 aaPredicted RBP5.98□□□□□ -1.45
RNU6-553P-201ENST00000364047 ACSS2Q9NR19 701 aa5.98□□□□□ -1.45
RNU6-553P-201ENST00000364047 ADRB1P08588 477 aa5.97□□□□□ -1.45
RNU6-553P-201ENST00000364047 APEX1P27695 318 aaKnown RBP5.97□□□□□ -1.45
RNU6-553P-201ENST00000364047 MAGEA10P43363 369 aaPredicted RBP5.97□□□□□ -1.45
RNU6-553P-201ENST00000364047 MOGSQ13724 837 aa5.97□□□□□ -1.45
RNU6-553P-201ENST00000364047 CNNM4Q6P4Q7 775 aa5.97□□□□□ -1.45
RNU6-553P-201ENST00000364047 RTN4RL1Q86UN2 441 aaPredicted RBP5.97□□□□□ -1.45
RNU6-553P-201ENST00000364047 LRRTM3Q86VH5 581 aa5.97□□□□□ -1.45
RNU6-553P-201ENST00000364047 DHX37Q8IY37 1157 aaKnown RBP5.97□□□□□ -1.45
RNU6-553P-201ENST00000364047 NIM1KQ8IY84 436 aa5.97□□□□□ -1.45
RNU6-553P-201ENST00000364047 E2F7Q96AV8 911 aa5.97□□□□□ -1.45
RNU6-553P-201ENST00000364047 SCYL1Q96KG9 808 aa5.97□□□□□ -1.45
RNU6-553P-201ENST00000364047 LRRC37BQ96QE4 947 aa5.97□□□□□ -1.45
RNU6-553P-201ENST00000364047 LMF1Q96S06 567 aa5.97□□□□□ -1.45
RNU6-553P-201ENST00000364047 FEZ1Q99689 392 aa5.97□□□□□ -1.45
RNU6-553P-201ENST00000364047 MEGF9Q9H1U4 602 aa5.97□□□□□ -1.45
RNU6-553P-201ENST00000364047 A0A0G2JNJ9 132 aa5.96□□□□□ -1.46
RNU6-553P-201ENST00000364047 GPR42O15529 346 aa5.96□□□□□ -1.46
RNU6-553P-201ENST00000364047 ALDH6A1Q02252 535 aaKnown RBP5.96□□□□□ -1.46
RNU6-553P-201ENST00000364047 EIF4HQ15056 248 aaKnown RBP5.96□□□□□ -1.46
RNU6-553P-201ENST00000364047 ZMAT1Q5H9K5 638 aa5.96□□□□□ -1.46
RNU6-553P-201ENST00000364047 TMEM200BQ69YZ2 307 aa5.96□□□□□ -1.46
RNU6-553P-201ENST00000364047 GRAMD4Q6IC98 578 aa5.96□□□□□ -1.46
RNU6-553P-201ENST00000364047 NOP9Q86U38 636 aaKnown RBP5.96□□□□□ -1.46
RNU6-553P-201ENST00000364047 TTC9BQ8N6N2 239 aa5.96□□□□□ -1.46
RNU6-553P-201ENST00000364047 CHST13Q8NET6 341 aa5.96□□□□□ -1.46
RNU6-553P-201ENST00000364047 C8orf49Q96NF6 230 aa5.96□□□□□ -1.46
RNU6-553P-201ENST00000364047 FOXB1Q99853 325 aa5.96□□□□□ -1.46
RNU6-553P-201ENST00000364047 KRTAP4-9Q9BYQ8 210 aa5.96□□□□□ -1.46
RNU6-553P-201ENST00000364047 KIAA1683Q9H0B3 1180 aa5.96□□□□□ -1.46
RNU6-553P-201ENST00000364047 SEC61A2Q9H9S3 476 aa5.96□□□□□ -1.46
RNU6-553P-201ENST00000364047 Q9UFV3 132 aa5.96□□□□□ -1.46
RNU6-553P-201ENST00000364047 PLAAQ9Y263 795 aa5.96□□□□□ -1.46
RNU6-553P-201ENST00000364047 ZKSCAN5Q9Y2L8 839 aa5.96□□□□□ -1.46
RNU6-553P-201ENST00000364047 GAS7O60861 476 aa5.95□□□□□ -1.46
RNU6-553P-201ENST00000364047 CYP17A1P05093 508 aa5.95□□□□□ -1.46
RNU6-553P-201ENST00000364047 SLC9A1P19634 815 aa5.95□□□□□ -1.46
RNU6-553P-201ENST00000364047 PTX3P26022 381 aaPredicted RBP5.95□□□□□ -1.46
RNU6-553P-201ENST00000364047 RAC3P60763 192 aa5.95□□□□□ -1.46
RNU6-553P-201ENST00000364047 NFKB2Q00653 900 aa5.95□□□□□ -1.46
RNU6-553P-201ENST00000364047 SLC6A3Q01959 620 aa5.95□□□□□ -1.46
RNU6-553P-201ENST00000364047 ROM1Q03395 351 aa5.95□□□□□ -1.46
RNU6-553P-201ENST00000364047 MAP3K12Q12852 859 aa5.95□□□□□ -1.46
RNU6-553P-201ENST00000364047 LARP4Q71RC2 724 aaKnown RBP eCLIP5.95□□□□□ -1.46
RNU6-553P-201ENST00000364047 RTKN2Q8IZC4 609 aa5.95□□□□□ -1.46
RNU6-553P-201ENST00000364047 NEIL1Q96FI4 390 aaPredicted RBP5.95□□□□□ -1.46
RNU6-553P-201ENST00000364047 ORAI3Q9BRQ5 295 aa5.95□□□□□ -1.46
RNU6-553P-201ENST00000364047 OXSMQ9NWU1 459 aa5.95□□□□□ -1.46
RNU6-553P-201ENST00000364047 ST6GALNAC2Q9UJ37 374 aa5.95□□□□□ -1.46
RNU6-553P-201ENST00000364047 NR2E1Q9Y466 385 aa5.95□□□□□ -1.46
RNU6-553P-201ENST00000364047 UBA6A0AVT1 1052 aaPredicted RBP5.94□□□□□ -1.46
RNU6-553P-201ENST00000364047 F2P00734 622 aa5.94□□□□□ -1.46
RNU6-553P-201ENST00000364047 PRLP01236 227 aa5.94□□□□□ -1.46
RNU6-553P-201ENST00000364047 ATP2A2P16615 1042 aaKnown RBP5.94□□□□□ -1.46
RNU6-553P-201ENST00000364047 POU3F2P20265 443 aaPredicted RBP5.94□□□□□ -1.46
RNU6-553P-201ENST00000364047 RGS3P49796 1198 aa5.94□□□□□ -1.46
RNU6-553P-201ENST00000364047 MEOX1P50221 254 aa5.94□□□□□ -1.46
RNU6-553P-201ENST00000364047 KRTAP10-2P60368 255 aa5.94□□□□□ -1.46
RNU6-553P-201ENST00000364047 ADAM17P78536 824 aa5.94□□□□□ -1.46
RNU6-553P-201ENST00000364047 ICAM4Q14773 271 aa5.94□□□□□ -1.46
RNU6-553P-201ENST00000364047 RNF151Q2KHN1 245 aa5.94□□□□□ -1.46
RNU6-553P-201ENST00000364047 DALRD3Q5D0E6 543 aaKnown RBP5.94□□□□□ -1.46
RNU6-553P-201ENST00000364047 CREB3L3Q68CJ9 461 aa5.94□□□□□ -1.46
RNU6-553P-201ENST00000364047 SLFN12LQ6IEE8 588 aa5.94□□□□□ -1.46
RNU6-553P-201ENST00000364047 FILIP1Q7Z7B0 1213 aa5.94□□□□□ -1.46
RNU6-553P-201ENST00000364047 KIAA0907Q7Z7F0 614 aaPredicted RBP5.94□□□□□ -1.46
RNU6-553P-201ENST00000364047 MFSD3Q96ES6 412 aa5.94□□□□□ -1.46
RNU6-553P-201ENST00000364047 GNRHR2Q96P88 292 aa5.94□□□□□ -1.46
RNU6-553P-201ENST00000364047 ELF4Q99607 663 aaPredicted RBP5.94□□□□□ -1.46
RNU6-553P-201ENST00000364047 TARS2Q9BW92 718 aaKnown RBP5.94□□□□□ -1.46
RNU6-553P-201ENST00000364047 IFT57Q9NWB7 429 aa5.94□□□□□ -1.46
RNU6-553P-201ENST00000364047 FAM83GA6ND36 823 aa5.93□□□□□ -1.46
RNU6-553P-201ENST00000364047 ZNF891A8MT65 544 aaPredicted RBP5.93□□□□□ -1.46
RNU6-553P-201ENST00000364047 ENPP3O14638 875 aa5.93□□□□□ -1.46
RNU6-553P-201ENST00000364047 MAFO75444 373 aaPredicted RBP5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms