RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 PCYT2Q99447 389 aa25.67■■□□□ 1.7
SDF4-202ENST00000360001 TINF2Q9BSI4 451 aa25.67■■□□□ 1.7
SDF4-202ENST00000360001 PARVGQ9HBI0 331 aa25.67■■□□□ 1.7
SDF4-202ENST00000360001 SLC5A4Q9NY91 659 aa25.67■■□□□ 1.7
SDF4-202ENST00000360001 USO1O60763 962 aaKnown RBP25.67■■□□□ 1.7
SDF4-202ENST00000360001 HSDL1Q3SXM5 330 aa25.67■■□□□ 1.7
SDF4-202ENST00000360001 EPM2AIP1Q7L775 607 aaPredicted RBP25.67■■□□□ 1.7
SDF4-202ENST00000360001 GPR20Q99678 358 aa25.67■■□□□ 1.7
SDF4-202ENST00000360001 MYH11P35749 1972 aa25.66■■□□□ 1.7
SDF4-202ENST00000360001 RASSF10A6NK89 507 aa25.66■■□□□ 1.7
SDF4-202ENST00000360001 UBASH3AP57075 661 aa25.66■■□□□ 1.7
SDF4-202ENST00000360001 DHX37Q8IY37 1157 aaKnown RBP25.66■■□□□ 1.7
SDF4-202ENST00000360001 MYCT1Q8N699 235 aa25.66■■□□□ 1.7
SDF4-202ENST00000360001 ZNF784Q8NCA9 323 aaPredicted RBP25.66■■□□□ 1.7
SDF4-202ENST00000360001 USP6NLQ92738 828 aa25.66■■□□□ 1.7
SDF4-202ENST00000360001 CREBZFQ9NS37 354 aa25.66■■□□□ 1.7
SDF4-202ENST00000360001 SEL1LQ9UBV2 794 aa25.66■■□□□ 1.7
SDF4-202ENST00000360001 AOC2O75106 756 aa25.65■■□□□ 1.7
SDF4-202ENST00000360001 TCF7P36402 384 aaPredicted RBP25.65■■□□□ 1.7
SDF4-202ENST00000360001 DEFB115Q30KQ5 88 aa25.65■■□□□ 1.7
SDF4-202ENST00000360001 XKR3Q5GH77 459 aa25.65■■□□□ 1.7
SDF4-202ENST00000360001 APTXQ7Z2E3 356 aaKnown RBP25.65■■□□□ 1.7
SDF4-202ENST00000360001 IRF2BP1Q8IU81 584 aa25.65■■□□□ 1.7
SDF4-202ENST00000360001 NAP1L5Q96NT1 182 aaPredicted RBP25.65■■□□□ 1.7
SDF4-202ENST00000360001 HOXC6P09630 235 aa25.65■■□□□ 1.7
SDF4-202ENST00000360001 MSL3Q8N5Y2 521 aaKnown RBP25.65■■□□□ 1.7
SDF4-202ENST00000360001 CSGALNACT2Q8N6G5 542 aa25.65■■□□□ 1.7
SDF4-202ENST00000360001 SPC24Q8NBT2 197 aa25.65■■□□□ 1.7
SDF4-202ENST00000360001 AFAP1L1Q8TED9 768 aa25.65■■□□□ 1.7
SDF4-202ENST00000360001 CEP170P1Q96L14 293 aa25.65■■□□□ 1.7
SDF4-202ENST00000360001 CAPNS2Q96L46 248 aa25.65■■□□□ 1.7
SDF4-202ENST00000360001 FIZ1Q96SL8 496 aa25.65■■□□□ 1.7
SDF4-202ENST00000360001 SRRTQ9BXP5 876 aaKnown RBP25.65■■□□□ 1.7
SDF4-202ENST00000360001 MRPL44Q9H9J2 332 aaKnown RBP25.65■■□□□ 1.7
SDF4-202ENST00000360001 MYBP10242 640 aa25.64■■□□□ 1.7
SDF4-202ENST00000360001 FOXR2Q6PJQ5 311 aa25.64■■□□□ 1.7
SDF4-202ENST00000360001 MAEAQ7L5Y9 396 aa25.64■■□□□ 1.7
SDF4-202ENST00000360001 SPATA33Q96N06 139 aa25.64■■□□□ 1.7
SDF4-202ENST00000360001 TIPINQ9BVW5 301 aa25.64■■□□□ 1.7
SDF4-202ENST00000360001 THAP9Q9H5L6 903 aa25.64■■□□□ 1.7
SDF4-202ENST00000360001 SEPT9Q9UHD8 586 aaPredicted RBP25.64■■□□□ 1.7
SDF4-202ENST00000360001 ALDH1A1P00352 501 aa25.64■■□□□ 1.69
SDF4-202ENST00000360001 OATP04181 439 aa25.64■■□□□ 1.69
SDF4-202ENST00000360001 PTGS1P23219 599 aa25.64■■□□□ 1.69
SDF4-202ENST00000360001 LRRC63Q05C16 580 aa25.64■■□□□ 1.69
SDF4-202ENST00000360001 ZCWPW2Q504Y3 356 aa25.64■■□□□ 1.69
SDF4-202ENST00000360001 NOC3LQ8WTT2 800 aaKnown RBP25.64■■□□□ 1.69
SDF4-202ENST00000360001 KCTD10Q9H3F6 313 aa25.64■■□□□ 1.69
SDF4-202ENST00000360001 INTS13Q9NVM9 706 aa25.64■■□□□ 1.69
SDF4-202ENST00000360001 NOP56O00567 594 aaKnown RBP25.63■■□□□ 1.69
SDF4-202ENST00000360001 CBFA2T2O43439 604 aa25.63■■□□□ 1.69
SDF4-202ENST00000360001 KIF20AO95235 890 aa25.63■■□□□ 1.69
SDF4-202ENST00000360001 APLP1P51693 650 aa25.63■■□□□ 1.69
SDF4-202ENST00000360001 ARHGAP1Q07960 439 aa25.63■■□□□ 1.69
SDF4-202ENST00000360001 FAM160B1Q5W0V3 765 aa25.63■■□□□ 1.69
SDF4-202ENST00000360001 NELFCDQ8IXH7 590 aa25.63■■□□□ 1.69
SDF4-202ENST00000360001 ABHD16BQ9H3Z7 469 aa25.63■■□□□ 1.69
SDF4-202ENST00000360001 CYP26B1Q9NR63 512 aa25.63■■□□□ 1.69
SDF4-202ENST00000360001 LIMA1Q9UHB6 759 aaKnown RBP25.63■■□□□ 1.69
SDF4-202ENST00000360001 GJD2Q9UKL4 321 aa25.63■■□□□ 1.69
SDF4-202ENST00000360001 LGR5O75473 907 aa25.62■■□□□ 1.69
SDF4-202ENST00000360001 YY1P25490 414 aa25.62■■□□□ 1.69
SDF4-202ENST00000360001 CTGFP29279 349 aa25.62■■□□□ 1.69
SDF4-202ENST00000360001 ADCYAP1R1P41586 468 aa25.62■■□□□ 1.69
SDF4-202ENST00000360001 STAT5BP51692 787 aa25.62■■□□□ 1.69
SDF4-202ENST00000360001 BMT2Q1RMZ1 405 aa25.62■■□□□ 1.69
SDF4-202ENST00000360001 TCP11X2Q5H9J9 407 aa25.62■■□□□ 1.69
SDF4-202ENST00000360001 ODR4Q5SWX8 454 aa25.62■■□□□ 1.69
SDF4-202ENST00000360001 GJC2Q5T442 439 aaPredicted RBP25.62■■□□□ 1.69
SDF4-202ENST00000360001 DRC7Q8IY82 874 aa25.62■■□□□ 1.69
SDF4-202ENST00000360001 TRIM44Q96DX7 344 aaPredicted RBP25.62■■□□□ 1.69
SDF4-202ENST00000360001 KCNJ18B7U540 433 aa25.62■■□□□ 1.69
SDF4-202ENST00000360001 GCNT3O95395 438 aa25.62■■□□□ 1.69
SDF4-202ENST00000360001 PTMAP06454 111 aaKnown RBP25.62■■□□□ 1.69
SDF4-202ENST00000360001 NMT1P30419 496 aaKnown RBP25.62■■□□□ 1.69
SDF4-202ENST00000360001 HOXD13P35453 343 aa25.62■■□□□ 1.69
SDF4-202ENST00000360001 SPAG1Q07617 926 aa25.62■■□□□ 1.69
SDF4-202ENST00000360001 ACVR2BQ13705 512 aa25.62■■□□□ 1.69
SDF4-202ENST00000360001 KCNJ12Q14500 433 aa25.62■■□□□ 1.69
SDF4-202ENST00000360001 ZNF507Q8TCN5 953 aa25.62■■□□□ 1.69
SDF4-202ENST00000360001 PDLIM7Q9NR12 457 aa25.62■■□□□ 1.69
SDF4-202ENST00000360001 FLRT1Q9NZU1 646 aa25.62■■□□□ 1.69
SDF4-202ENST00000360001 MGAMO43451 1857 aa25.61■■□□□ 1.69
SDF4-202ENST00000360001 TNPO2O14787 897 aaKnown RBP25.61■■□□□ 1.69
SDF4-202ENST00000360001 KRT31Q15323 416 aa25.61■■□□□ 1.69
SDF4-202ENST00000360001 FAM178BQ8IXR5 827 aa25.61■■□□□ 1.69
SDF4-202ENST00000360001 EEF2KMTQ96G04 330 aa25.61■■□□□ 1.69
SDF4-202ENST00000360001 GPRC5CQ9NQ84 441 aa25.61■■□□□ 1.69
SDF4-202ENST00000360001 A0A1B0GTH6 734 aa25.6■■□□□ 1.69
SDF4-202ENST00000360001 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.6■■□□□ 1.69
SDF4-202ENST00000360001 LRRC10BA6NIK2 292 aa25.6■■□□□ 1.69
SDF4-202ENST00000360001 PRPF6O94906 941 aaKnown RBP25.6■■□□□ 1.69
SDF4-202ENST00000360001 ZNF720Q7Z2F6 126 aa25.6■■□□□ 1.69
SDF4-202ENST00000360001 SOCS4Q8WXH5 440 aa25.6■■□□□ 1.69
SDF4-202ENST00000360001 DRC1Q96MC2 740 aa25.6■■□□□ 1.69
SDF4-202ENST00000360001 TSG101Q99816 390 aa25.6■■□□□ 1.69
SDF4-202ENST00000360001 NIFKQ9BYG3 293 aaKnown RBP25.6■■□□□ 1.69
SDF4-202ENST00000360001 AZI2Q9H6S1 392 aa25.6■■□□□ 1.69
SDF4-202ENST00000360001 EMSYQ7Z589 1322 aa25.6■■□□□ 1.69
SDF4-202ENST00000360001 EIF3DO15371 548 aaKnown RBP eCLIP25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms