RNA–Protein interactions for RNA: ENST00000347968.7

MBD1-204, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-204ENST00000347968 DTX3LQ8TDB6 740 aa17.58■□□□□ 0.41
MBD1-204ENST00000347968 CENPTQ96BT3 561 aa17.58■□□□□ 0.41
MBD1-204ENST00000347968 OPTNQ96CV9 577 aa17.58■□□□□ 0.41
MBD1-204ENST00000347968 ZMYND12Q9H0C1 365 aa17.58■□□□□ 0.41
MBD1-204ENST00000347968 VCXQ9H320 206 aa17.58■□□□□ 0.41
MBD1-204ENST00000347968 BPIFB4P59827 614 aa17.58■□□□□ 0.4
MBD1-204ENST00000347968 ASIC1P78348 528 aa17.58■□□□□ 0.4
MBD1-204ENST00000347968 LBRQ14739 615 aaKnown RBP17.58■□□□□ 0.4
MBD1-204ENST00000347968 APBB1IPQ7Z5R6 666 aaPredicted RBP17.58■□□□□ 0.4
MBD1-204ENST00000347968 SCFD2Q8WU76 684 aa17.58■□□□□ 0.4
MBD1-204ENST00000347968 ARMT1Q9H993 441 aa17.58■□□□□ 0.4
MBD1-204ENST00000347968 CWC25Q9NXE8 425 aaPredicted RBP17.58■□□□□ 0.4
MBD1-204ENST00000347968 ROBO1Q9Y6N7 1651 aa17.58■□□□□ 0.4
MBD1-204ENST00000347968 NHSL1Q5SYE7 1610 aa17.58■□□□□ 0.4
MBD1-204ENST00000347968 POLR2FP61218 127 aaKnown RBP17.58■□□□□ 0.4
MBD1-204ENST00000347968 CERKLQ49MI3 558 aaPredicted RBP17.58■□□□□ 0.4
MBD1-204ENST00000347968 VWA3BQ502W6 1294 aa17.58■□□□□ 0.4
MBD1-204ENST00000347968 PDXDC1Q6P996 788 aa17.58■□□□□ 0.4
MBD1-204ENST00000347968 CCDC25Q86WR0 208 aa17.58■□□□□ 0.4
MBD1-204ENST00000347968 VSIG1Q86XK7 387 aa17.58■□□□□ 0.4
MBD1-204ENST00000347968 GBP5Q96PP8 586 aa17.58■□□□□ 0.4
MBD1-204ENST00000347968 ZBTB3Q9H5J0 574 aa17.58■□□□□ 0.4
MBD1-204ENST00000347968 CYP39A1Q9NYL5 469 aa17.58■□□□□ 0.4
MBD1-204ENST00000347968 INTUQ9ULD6 942 aa17.58■□□□□ 0.4
MBD1-204ENST00000347968 LCA5LO95447 670 aa17.57■□□□□ 0.4
MBD1-204ENST00000347968 LIFRP42702 1097 aa17.57■□□□□ 0.4
MBD1-204ENST00000347968 KCNMA1Q12791 1236 aa17.57■□□□□ 0.4
MBD1-204ENST00000347968 FAM133AQ8N9E0 248 aa17.57■□□□□ 0.4
MBD1-204ENST00000347968 GIMAP8Q8ND71 665 aaPredicted RBP17.57■□□□□ 0.4
MBD1-204ENST00000347968 SNRNP27Q8WVK2 155 aaKnown RBP17.57■□□□□ 0.4
MBD1-204ENST00000347968 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.57■□□□□ 0.4
MBD1-204ENST00000347968 A0A1W2PQJ5 194 aa17.57■□□□□ 0.4
MBD1-204ENST00000347968 CCDC6Q16204 474 aa17.57■□□□□ 0.4
MBD1-204ENST00000347968 MFSD6Q6ZSS7 791 aa17.57■□□□□ 0.4
MBD1-204ENST00000347968 ANKS1AQ92625 1134 aa17.57■□□□□ 0.4
MBD1-204ENST00000347968 ERP27Q96DN0 273 aa17.57■□□□□ 0.4
MBD1-204ENST00000347968 BICD1Q96G01 975 aa17.57■□□□□ 0.4
MBD1-204ENST00000347968 DISC1Q9NRI5 854 aa17.57■□□□□ 0.4
MBD1-204ENST00000347968 UTP11Q9Y3A2 253 aaKnown RBP17.57■□□□□ 0.4
MBD1-204ENST00000347968 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.56■□□□□ 0.4
MBD1-204ENST00000347968 PGRMC1O00264 195 aaKnown RBP17.56■□□□□ 0.4
MBD1-204ENST00000347968 PFDN1O60925 122 aa17.56■□□□□ 0.4
MBD1-204ENST00000347968 CCNE1P24864 410 aa17.56■□□□□ 0.4
MBD1-204ENST00000347968 PMS2P54278 862 aa17.56■□□□□ 0.4
MBD1-204ENST00000347968 CASP7P55210 303 aa17.56■□□□□ 0.4
MBD1-204ENST00000347968 RFX8Q6ZV50 586 aa17.56■□□□□ 0.4
MBD1-204ENST00000347968 ECHDC2Q86YB7 292 aa17.56■□□□□ 0.4
MBD1-204ENST00000347968 ASAP3Q8TDY4 903 aa17.56■□□□□ 0.4
MBD1-204ENST00000347968 CRAMP1Q96RY5 1269 aa17.56■□□□□ 0.4
MBD1-204ENST00000347968 PHF20Q9BVI0 1012 aa17.56■□□□□ 0.4
MBD1-204ENST00000347968 SEMA6BQ9H3T3 888 aa17.56■□□□□ 0.4
MBD1-204ENST00000347968 ETNK2Q9NVF9 386 aa17.56■□□□□ 0.4
MBD1-204ENST00000347968 TMOD3Q9NYL9 352 aa17.56■□□□□ 0.4
MBD1-204ENST00000347968 ARPP21Q9UBL0 812 aaPredicted RBP17.56■□□□□ 0.4
MBD1-204ENST00000347968 NVLO15381 856 aaKnown RBP17.56■□□□□ 0.4
MBD1-204ENST00000347968 CBX6O95503 412 aa17.56■□□□□ 0.4
MBD1-204ENST00000347968 GNA14O95837 355 aa17.56■□□□□ 0.4
MBD1-204ENST00000347968 HNRNPH3P31942 346 aaKnown RBP17.56■□□□□ 0.4
MBD1-204ENST00000347968 LONRF1Q17RB8 773 aa17.56■□□□□ 0.4
MBD1-204ENST00000347968 SGSM1Q2NKQ1 1148 aa17.56■□□□□ 0.4
MBD1-204ENST00000347968 DZIP3Q86Y13 1208 aaKnown RBP17.56■□□□□ 0.4
MBD1-204ENST00000347968 FBXO25Q8TCJ0 367 aa17.56■□□□□ 0.4
MBD1-204ENST00000347968 NEK9Q8TD19 979 aa17.56■□□□□ 0.4
MBD1-204ENST00000347968 ATP8B4Q8TF62 1192 aa17.56■□□□□ 0.4
MBD1-204ENST00000347968 IFT43Q96FT9 208 aa17.56■□□□□ 0.4
MBD1-204ENST00000347968 ZWILCHQ9H900 591 aa17.56■□□□□ 0.4
MBD1-204ENST00000347968 CTNNAL1Q9UBT7 734 aa17.56■□□□□ 0.4
MBD1-204ENST00000347968 CLSTN1O94985 981 aa17.56■□□□□ 0.4
MBD1-204ENST00000347968 CYP1A1P04798 512 aaPredicted RBP17.56■□□□□ 0.4
MBD1-204ENST00000347968 ADD2P35612 726 aa17.56■□□□□ 0.4
MBD1-204ENST00000347968 RFWD3Q6PCD5 774 aa17.56■□□□□ 0.4
MBD1-204ENST00000347968 PIGBQ92521 554 aa17.56■□□□□ 0.4
MBD1-204ENST00000347968 MYLK2Q9H1R3 596 aa17.56■□□□□ 0.4
MBD1-204ENST00000347968 ERVV-2B6SEH9 535 aa17.55■□□□□ 0.4
MBD1-204ENST00000347968 FLOT1O75955 427 aa17.55■□□□□ 0.4
MBD1-204ENST00000347968 MBD4O95243 580 aa17.55■□□□□ 0.4
MBD1-204ENST00000347968 OAS1P00973 400 aaKnown RBP17.55■□□□□ 0.4
MBD1-204ENST00000347968 RASA1P20936 1047 aa17.55■□□□□ 0.4
MBD1-204ENST00000347968 SLC9C1Q4G0N8 1177 aa17.55■□□□□ 0.4
MBD1-204ENST00000347968 TCERG1LQ5VWI1 586 aa17.55■□□□□ 0.4
MBD1-204ENST00000347968 DYDC2Q96IM9 177 aa17.55■□□□□ 0.4
MBD1-204ENST00000347968 DENND2DQ9H6A0 471 aaPredicted RBP17.55■□□□□ 0.4
MBD1-204ENST00000347968 RXFP1Q9HBX9 757 aa17.55■□□□□ 0.4
MBD1-204ENST00000347968 ARL2BPQ9Y2Y0 163 aa17.55■□□□□ 0.4
MBD1-204ENST00000347968 TMEM120BA0PK00 339 aa17.55■□□□□ 0.4
MBD1-204ENST00000347968 AFPP02771 609 aaKnown RBP17.55■□□□□ 0.4
MBD1-204ENST00000347968 XBP1P17861 261 aa17.55■□□□□ 0.4
MBD1-204ENST00000347968 LRRC41Q15345 812 aa17.55■□□□□ 0.4
MBD1-204ENST00000347968 P3H1Q32P28 736 aa17.55■□□□□ 0.4
MBD1-204ENST00000347968 ANKRD23Q86SG2 305 aa17.55■□□□□ 0.4
MBD1-204ENST00000347968 ABTB1Q969K4 478 aaPredicted RBP17.55■□□□□ 0.4
MBD1-204ENST00000347968 DNAJC17Q9NVM6 304 aaKnown RBP17.55■□□□□ 0.4
MBD1-204ENST00000347968 PHF24Q9UPV7 400 aa17.55■□□□□ 0.4
MBD1-204ENST00000347968 CHMP2BQ9UQN3 213 aa17.55■□□□□ 0.4
MBD1-204ENST00000347968 ABCC12Q96J65 1359 aa17.54■□□□□ 0.4
MBD1-204ENST00000347968 ZNF189O75820 626 aaPredicted RBP17.54■□□□□ 0.4
MBD1-204ENST00000347968 UNC5CO95185 931 aa17.54■□□□□ 0.4
MBD1-204ENST00000347968 FAM200BP0CF97 657 aa17.54■□□□□ 0.4
MBD1-204ENST00000347968 UBA7P41226 1012 aa17.54■□□□□ 0.4
MBD1-204ENST00000347968 ZNF211Q13398 564 aaPredicted RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms