RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 EMILIN3Q9NT22 766 aa17.31■□□□□ 0.36
NPHP3-201ENST00000337331 DAPK3O43293 454 aa17.3■□□□□ 0.36
NPHP3-201ENST00000337331 PALMO75781 387 aa17.3■□□□□ 0.36
NPHP3-201ENST00000337331 KCNA3P22001 575 aa17.3■□□□□ 0.36
NPHP3-201ENST00000337331 LIG4P49917 911 aa17.3■□□□□ 0.36
NPHP3-201ENST00000337331 TSGA10IPQ3SY00 556 aa17.3■□□□□ 0.36
NPHP3-201ENST00000337331 TBC1D10BQ4KMP7 808 aaPredicted RBP17.3■□□□□ 0.36
NPHP3-201ENST00000337331 LGSNQ5TDP6 509 aa17.3■□□□□ 0.36
NPHP3-201ENST00000337331 SLC17A8Q8NDX2 589 aa17.3■□□□□ 0.36
NPHP3-201ENST00000337331 NEK9Q8TD19 979 aa17.3■□□□□ 0.36
NPHP3-201ENST00000337331 AENQ8WTP8 325 aaKnown RBP17.3■□□□□ 0.36
NPHP3-201ENST00000337331 HIC2Q96JB3 615 aa17.3■□□□□ 0.36
NPHP3-201ENST00000337331 RNF17Q9BXT8 1623 aaKnown RBP17.3■□□□□ 0.36
NPHP3-201ENST00000337331 THAP12O43422 761 aa17.3■□□□□ 0.36
NPHP3-201ENST00000337331 AFPP02771 609 aaKnown RBP17.3■□□□□ 0.36
NPHP3-201ENST00000337331 ANKRD20A2Q5SQ80 823 aa17.3■□□□□ 0.36
NPHP3-201ENST00000337331 ANKRD20A1Q5TYW2 823 aa17.3■□□□□ 0.36
NPHP3-201ENST00000337331 SUPT20HQ8NEM7 779 aa17.3■□□□□ 0.36
NPHP3-201ENST00000337331 SLC4A7Q9Y6M7 1214 aa17.3■□□□□ 0.36
NPHP3-201ENST00000337331 FAM182BQ5T319 152 aa17.3■□□□□ 0.36
NPHP3-201ENST00000337331 FOXP4Q8IVH2 680 aaPredicted RBP17.3■□□□□ 0.36
NPHP3-201ENST00000337331 CDAN1Q8IWY9 1227 aa17.3■□□□□ 0.36
NPHP3-201ENST00000337331 ARL10Q8N8L6 244 aa17.3■□□□□ 0.36
NPHP3-201ENST00000337331 CPVLQ9H3G5 476 aa17.3■□□□□ 0.36
NPHP3-201ENST00000337331 AGPAT5Q9NUQ2 364 aa17.3■□□□□ 0.36
NPHP3-201ENST00000337331 STK32BQ9NY57 414 aa17.3■□□□□ 0.36
NPHP3-201ENST00000337331 DNAJC8O75937 253 aaPredicted RBP17.29■□□□□ 0.36
NPHP3-201ENST00000337331 PRDX5P30044 214 aa17.29■□□□□ 0.36
NPHP3-201ENST00000337331 FAM196AQ6ZSG2 479 aa17.29■□□□□ 0.36
NPHP3-201ENST00000337331 USP49Q70CQ1 688 aa17.29■□□□□ 0.36
NPHP3-201ENST00000337331 FAM81AQ8TBF8 368 aa17.29■□□□□ 0.36
NPHP3-201ENST00000337331 DAAM1Q9Y4D1 1078 aa17.29■□□□□ 0.36
NPHP3-201ENST00000337331 RASGRF2O14827 1237 aa17.29■□□□□ 0.36
NPHP3-201ENST00000337331 SORBS3O60504 671 aa17.29■□□□□ 0.36
NPHP3-201ENST00000337331 PAPD7Q5XG87 772 aaKnown RBP17.29■□□□□ 0.36
NPHP3-201ENST00000337331 CYTH2Q99418 400 aa17.29■□□□□ 0.36
NPHP3-201ENST00000337331 PGRMC1O00264 195 aaKnown RBP17.29■□□□□ 0.36
NPHP3-201ENST00000337331 CYP2D6P10635 497 aa17.29■□□□□ 0.36
NPHP3-201ENST00000337331 EIF3BP55884 814 aaKnown RBP17.29■□□□□ 0.36
NPHP3-201ENST00000337331 UBE2SQ16763 222 aa17.29■□□□□ 0.36
NPHP3-201ENST00000337331 CCDC92Q53HC0 331 aaPredicted RBP17.29■□□□□ 0.36
NPHP3-201ENST00000337331 BSPRYQ5W0U4 402 aa17.29■□□□□ 0.36
NPHP3-201ENST00000337331 ZMYND12Q9H0C1 365 aa17.29■□□□□ 0.36
NPHP3-201ENST00000337331 ZNF148Q9UQR1 794 aa17.29■□□□□ 0.36
NPHP3-201ENST00000337331 GLI2P10070 1586 aa17.29■□□□□ 0.36
NPHP3-201ENST00000337331 PDE2AO00408 941 aaPredicted RBP17.28■□□□□ 0.36
NPHP3-201ENST00000337331 FAM153BP0C7A2 387 aa17.28■□□□□ 0.36
NPHP3-201ENST00000337331 LMNB1P20700 586 aa17.28■□□□□ 0.36
NPHP3-201ENST00000337331 FAM153CQ494X1 144 aa17.28■□□□□ 0.36
NPHP3-201ENST00000337331 ZNF579Q8NAF0 562 aaKnown RBP17.28■□□□□ 0.36
NPHP3-201ENST00000337331 GSDMBQ8TAX9 411 aa17.28■□□□□ 0.36
NPHP3-201ENST00000337331 KDM4CQ9H3R0 1056 aa17.28■□□□□ 0.36
NPHP3-201ENST00000337331 LY9Q9HBG7 655 aa17.28■□□□□ 0.36
NPHP3-201ENST00000337331 BSDC1Q9NW68 430 aaPredicted RBP17.28■□□□□ 0.36
NPHP3-201ENST00000337331 TBK1Q9UHD2 729 aa17.28■□□□□ 0.36
NPHP3-201ENST00000337331 FAM153AQ9UHL3 310 aa17.28■□□□□ 0.36
NPHP3-201ENST00000337331 ANAPC4Q9UJX5 808 aa17.28■□□□□ 0.36
NPHP3-201ENST00000337331 CORO1CQ9ULV4 474 aaPredicted RBP17.28■□□□□ 0.36
NPHP3-201ENST00000337331 AGPSO00116 658 aa17.28■□□□□ 0.36
NPHP3-201ENST00000337331 ARHGEF16Q5VV41 709 aa17.28■□□□□ 0.36
NPHP3-201ENST00000337331 TAB3Q8N5C8 712 aaPredicted RBP17.28■□□□□ 0.36
NPHP3-201ENST00000337331 RASSF9O75901 435 aa17.28■□□□□ 0.36
NPHP3-201ENST00000337331 PSMC2P35998 433 aaKnown RBP17.28■□□□□ 0.36
NPHP3-201ENST00000337331 GRM1Q13255 1194 aa17.28■□□□□ 0.36
NPHP3-201ENST00000337331 MAP7D3Q8IWC1 876 aa17.28■□□□□ 0.36
NPHP3-201ENST00000337331 NIM1KQ8IY84 436 aa17.28■□□□□ 0.36
NPHP3-201ENST00000337331 LRRC34Q8IZ02 419 aa17.28■□□□□ 0.36
NPHP3-201ENST00000337331 ARHGAP24Q8N264 748 aa17.28■□□□□ 0.36
NPHP3-201ENST00000337331 ENAHQ8N8S7 591 aaPredicted RBP17.28■□□□□ 0.36
NPHP3-201ENST00000337331 DTX3LQ8TDB6 740 aa17.28■□□□□ 0.36
NPHP3-201ENST00000337331 POMGNT1Q8WZA1 660 aa17.28■□□□□ 0.36
NPHP3-201ENST00000337331 RNF34Q969K3 372 aa17.28■□□□□ 0.36
NPHP3-201ENST00000337331 SH3GL2Q99962 352 aa17.28■□□□□ 0.36
NPHP3-201ENST00000337331 PTPN22Q9Y2R2 807 aa17.28■□□□□ 0.36
NPHP3-201ENST00000337331 LGALS16A8MUM7 142 aa17.28■□□□□ 0.36
NPHP3-201ENST00000337331 GFPT2O94808 682 aa17.28■□□□□ 0.36
NPHP3-201ENST00000337331 UBOX5O94941 541 aa17.28■□□□□ 0.36
NPHP3-201ENST00000337331 MYL7Q01449 175 aa17.28■□□□□ 0.36
NPHP3-201ENST00000337331 PALM2Q8IXS6 379 aa17.28■□□□□ 0.36
NPHP3-201ENST00000337331 BRIP1Q9BX63 1249 aa17.28■□□□□ 0.36
NPHP3-201ENST00000337331 CHMP2BQ9UQN3 213 aa17.28■□□□□ 0.36
NPHP3-201ENST00000337331 UBN2Q6ZU65 1347 aa17.27■□□□□ 0.36
NPHP3-201ENST00000337331 I3L4J1 428 aa17.27■□□□□ 0.36
NPHP3-201ENST00000337331 DNM1LO00429 736 aa17.27■□□□□ 0.36
NPHP3-201ENST00000337331 GEN1Q17RS7 908 aa17.27■□□□□ 0.36
NPHP3-201ENST00000337331 RSAD2Q8WXG1 361 aa17.27■□□□□ 0.36
NPHP3-201ENST00000337331 KANSL2Q9H9L4 492 aa17.27■□□□□ 0.36
NPHP3-201ENST00000337331 RAB20Q9NX57 234 aa17.27■□□□□ 0.36
NPHP3-201ENST00000337331 CCPG1Q9ULG6 757 aa17.27■□□□□ 0.36
NPHP3-201ENST00000337331 A2ML1A8K2U0 1454 aa17.27■□□□□ 0.36
NPHP3-201ENST00000337331 NSFP46459 744 aaKnown RBP17.27■□□□□ 0.36
NPHP3-201ENST00000337331 SMC1BQ8NDV3 1235 aa17.27■□□□□ 0.36
NPHP3-201ENST00000337331 NPHP4O75161 1426 aaPredicted RBP17.27■□□□□ 0.36
NPHP3-201ENST00000337331 PASKQ96RG2 1323 aa17.27■□□□□ 0.36
NPHP3-201ENST00000337331 STK36Q9NRP7 1315 aa17.27■□□□□ 0.36
NPHP3-201ENST00000337331 SPHKAPQ2M3C7 1700 aa17.27■□□□□ 0.36
NPHP3-201ENST00000337331 TCP11X1B4DZS4 312 aa17.27■□□□□ 0.35
NPHP3-201ENST00000337331 UBTFL6P0CB48 400 aaPredicted RBP17.27■□□□□ 0.35
NPHP3-201ENST00000337331 AOC3Q16853 763 aa17.27■□□□□ 0.35
NPHP3-201ENST00000337331 SPATA21Q7Z572 469 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms