RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 ALDH1B1P30837 517 aa17.54■□□□□ 0.4
PTCH1-201ENST00000331920 RBL2Q08999 1139 aa17.54■□□□□ 0.4
PTCH1-201ENST00000331920 PRG3Q9Y2Y8 225 aaPredicted RBP17.54■□□□□ 0.4
PTCH1-201ENST00000331920 COPB1P53618 953 aaKnown RBP17.54■□□□□ 0.4
PTCH1-201ENST00000331920 NR5A1Q13285 461 aa17.54■□□□□ 0.4
PTCH1-201ENST00000331920 BEND6Q5SZJ8 279 aaPredicted RBP17.54■□□□□ 0.4
PTCH1-201ENST00000331920 TSPYL6Q8N831 410 aa17.54■□□□□ 0.4
PTCH1-201ENST00000331920 SAYSD1Q9NPB0 183 aa17.54■□□□□ 0.4
PTCH1-201ENST00000331920 APBA1Q02410 837 aa17.54■□□□□ 0.4
PTCH1-201ENST00000331920 C1orf131Q8NDD1 294 aaKnown RBP17.54■□□□□ 0.4
PTCH1-201ENST00000331920 CCHCR1Q8TD31 782 aa17.54■□□□□ 0.4
PTCH1-201ENST00000331920 LPIN2Q92539 896 aa17.54■□□□□ 0.4
PTCH1-201ENST00000331920 CNOT10Q9H9A5 744 aaKnown RBP17.54■□□□□ 0.4
PTCH1-201ENST00000331920 PIDD1Q9HB75 910 aa17.54■□□□□ 0.4
PTCH1-201ENST00000331920 DIABLOQ9NR28 239 aa17.54■□□□□ 0.4
PTCH1-201ENST00000331920 MID2Q9UJV3 735 aa17.54■□□□□ 0.4
PTCH1-201ENST00000331920 ADGRF5Q8IZF2 1346 aa17.54■□□□□ 0.4
PTCH1-201ENST00000331920 DPYSL4O14531 572 aa17.54■□□□□ 0.4
PTCH1-201ENST00000331920 PWP1Q13610 501 aa17.54■□□□□ 0.4
PTCH1-201ENST00000331920 DCTPP1Q9H773 170 aa17.54■□□□□ 0.4
PTCH1-201ENST00000331920 MYO1DO94832 1006 aa17.53■□□□□ 0.4
PTCH1-201ENST00000331920 EPM2AIP1Q7L775 607 aaPredicted RBP17.53■□□□□ 0.4
PTCH1-201ENST00000331920 PASD1Q8IV76 773 aa17.53■□□□□ 0.4
PTCH1-201ENST00000331920 USP17L12C9JPN9 530 aa17.53■□□□□ 0.4
PTCH1-201ENST00000331920 USP17L21D6R901 530 aa17.53■□□□□ 0.4
PTCH1-201ENST00000331920 MMS22LQ6ZRQ5 1243 aa17.53■□□□□ 0.4
PTCH1-201ENST00000331920 TAS2R42Q7RTR8 314 aa17.53■□□□□ 0.4
PTCH1-201ENST00000331920 WDR75Q8IWA0 830 aaKnown RBP17.53■□□□□ 0.4
PTCH1-201ENST00000331920 AHI1Q8N157 1196 aa17.53■□□□□ 0.4
PTCH1-201ENST00000331920 NUP93Q8N1F7 819 aa17.53■□□□□ 0.4
PTCH1-201ENST00000331920 CENPTQ96BT3 561 aa17.53■□□□□ 0.4
PTCH1-201ENST00000331920 ARPP21Q9UBL0 812 aaPredicted RBP17.53■□□□□ 0.4
PTCH1-201ENST00000331920 PCDHA1Q9Y5I3 950 aa17.53■□□□□ 0.4
PTCH1-201ENST00000331920 NACC1Q96RE7 527 aa17.53■□□□□ 0.4
PTCH1-201ENST00000331920 MYO1GB0I1T2 1018 aa17.53■□□□□ 0.4
PTCH1-201ENST00000331920 NR1D1P20393 614 aa17.53■□□□□ 0.4
PTCH1-201ENST00000331920 AP1B1Q10567 949 aa17.53■□□□□ 0.4
PTCH1-201ENST00000331920 MTERF2Q49AM1 385 aa17.53■□□□□ 0.4
PTCH1-201ENST00000331920 ANKS3Q6ZW76 656 aa17.53■□□□□ 0.4
PTCH1-201ENST00000331920 ARL8AQ96BM9 186 aa17.53■□□□□ 0.4
PTCH1-201ENST00000331920 RPF1Q9H9Y2 349 aaKnown RBP17.53■□□□□ 0.4
PTCH1-201ENST00000331920 TSC22D4Q9Y3Q8 395 aa17.53■□□□□ 0.4
PTCH1-201ENST00000331920 TSC22D2O75157 780 aa17.53■□□□□ 0.4
PTCH1-201ENST00000331920 PPP3CCP48454 512 aa17.53■□□□□ 0.4
PTCH1-201ENST00000331920 SLC16A1P53985 500 aa17.53■□□□□ 0.4
PTCH1-201ENST00000331920 KCTD2Q14681 263 aa17.53■□□□□ 0.4
PTCH1-201ENST00000331920 OR6B3Q8NGW1 331 aa17.53■□□□□ 0.4
PTCH1-201ENST00000331920 OTUD7AQ8TE49 926 aaPredicted RBP17.53■□□□□ 0.4
PTCH1-201ENST00000331920 ASIC4Q96FT7 647 aa17.53■□□□□ 0.4
PTCH1-201ENST00000331920 NGRNQ9NPE2 291 aaKnown RBP17.53■□□□□ 0.4
PTCH1-201ENST00000331920 SMARCA4P51532 1647 aa17.53■□□□□ 0.4
PTCH1-201ENST00000331920 S100A5P33763 92 aa17.53■□□□□ 0.4
PTCH1-201ENST00000331920 RWDD2BP57060 319 aa17.53■□□□□ 0.4
PTCH1-201ENST00000331920 RCSD1Q6JBY9 416 aa17.53■□□□□ 0.4
PTCH1-201ENST00000331920 ELMSAN1Q6PJG2 1045 aa17.53■□□□□ 0.4
PTCH1-201ENST00000331920 CAPN10Q9HC96 672 aa17.53■□□□□ 0.4
PTCH1-201ENST00000331920 TTC23LQ6PF05 361 aa17.52■□□□□ 0.4
PTCH1-201ENST00000331920 SH3TC1Q8TE82 1336 aa17.52■□□□□ 0.4
PTCH1-201ENST00000331920 ICA1Q05084 483 aa17.52■□□□□ 0.4
PTCH1-201ENST00000331920 EIF4A2Q14240 407 aaKnown RBP17.52■□□□□ 0.4
PTCH1-201ENST00000331920 SPARCL1Q14515 664 aa17.52■□□□□ 0.4
PTCH1-201ENST00000331920 LARP4BQ92615 738 aaKnown RBP17.52■□□□□ 0.4
PTCH1-201ENST00000331920 CEP170P1Q96L14 293 aa17.52■□□□□ 0.4
PTCH1-201ENST00000331920 NOP53Q9NZM5 478 aaKnown RBP17.52■□□□□ 0.4
PTCH1-201ENST00000331920 FAM26FQ5R3K3 315 aa17.52■□□□□ 0.4
PTCH1-201ENST00000331920 KDELC2Q7Z4H8 507 aa17.52■□□□□ 0.4
PTCH1-201ENST00000331920 HAUS4Q9H6D7 363 aa17.52■□□□□ 0.4
PTCH1-201ENST00000331920 KLHL18O94889 574 aa17.52■□□□□ 0.39
PTCH1-201ENST00000331920 DCAF15Q66K64 600 aa17.52■□□□□ 0.39
PTCH1-201ENST00000331920 CYGBQ8WWM9 190 aa17.52■□□□□ 0.39
PTCH1-201ENST00000331920 ABT1Q9ULW3 272 aaKnown RBP17.52■□□□□ 0.39
PTCH1-201ENST00000331920 CCND2P30279 289 aa17.52■□□□□ 0.39
PTCH1-201ENST00000331920 FAM161BQ96MY7 647 aa17.52■□□□□ 0.39
PTCH1-201ENST00000331920 AIPL1Q9NZN9 384 aa17.52■□□□□ 0.39
PTCH1-201ENST00000331920 PCDHGB4Q9UN71 923 aa17.52■□□□□ 0.39
PTCH1-201ENST00000331920 ANKRD65E5RJM6 399 aa17.52■□□□□ 0.39
PTCH1-201ENST00000331920 ARMCX2Q7L311 632 aa17.52■□□□□ 0.39
PTCH1-201ENST00000331920 ACCSQ96QU6 501 aa17.52■□□□□ 0.39
PTCH1-201ENST00000331920 PAIP2BQ9ULR5 123 aaKnown RBP17.52■□□□□ 0.39
PTCH1-201ENST00000331920 NBPF26B4DH59 902 aa17.51■□□□□ 0.39
PTCH1-201ENST00000331920 IYDQ6PHW0 289 aa17.51■□□□□ 0.39
PTCH1-201ENST00000331920 NBPF15Q8N660 670 aa17.51■□□□□ 0.39
PTCH1-201ENST00000331920 NDE1Q9NXR1 346 aa17.51■□□□□ 0.39
PTCH1-201ENST00000331920 CLIC4Q9Y696 253 aa17.51■□□□□ 0.39
PTCH1-201ENST00000331920 NOS1P29475 1434 aa17.51■□□□□ 0.39
PTCH1-201ENST00000331920 ARHGAP17Q68EM7 881 aa17.51■□□□□ 0.39
PTCH1-201ENST00000331920 LRRC8BQ6P9F7 803 aa17.51■□□□□ 0.39
PTCH1-201ENST00000331920 EXOC8Q8IYI6 725 aa17.51■□□□□ 0.39
PTCH1-201ENST00000331920 ZNF555Q8NEP9 628 aa17.51■□□□□ 0.39
PTCH1-201ENST00000331920 MEFVO15553 781 aaPredicted RBP17.51■□□□□ 0.39
PTCH1-201ENST00000331920 CYTH3O43739 400 aa17.51■□□□□ 0.39
PTCH1-201ENST00000331920 OSBPP22059 807 aa17.51■□□□□ 0.39
PTCH1-201ENST00000331920 NNMTP40261 264 aa17.51■□□□□ 0.39
PTCH1-201ENST00000331920 ZNF394Q53GI3 561 aa17.51■□□□□ 0.39
PTCH1-201ENST00000331920 PNMA1Q8ND90 353 aa17.51■□□□□ 0.39
PTCH1-201ENST00000331920 RASA4BC9J798 803 aa17.51■□□□□ 0.39
PTCH1-201ENST00000331920 RASA4O43374 803 aa17.51■□□□□ 0.39
PTCH1-201ENST00000331920 MYL3P08590 195 aa17.51■□□□□ 0.39
PTCH1-201ENST00000331920 FOSL2P15408 326 aa17.51■□□□□ 0.39
PTCH1-201ENST00000331920 MAP4P27816 1152 aaKnown RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms