RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 SGO2Q562F6 1265 aa17.75■□□□□ 0.43
SFXN1-201ENST00000321442 NRXN3Q9Y4C0 1643 aa17.75■□□□□ 0.43
SFXN1-201ENST00000321442 CCDC188H7C350 402 aa17.75■□□□□ 0.43
SFXN1-201ENST00000321442 CIB2O75838 187 aa17.75■□□□□ 0.43
SFXN1-201ENST00000321442 PSMC2P35998 433 aaKnown RBP17.75■□□□□ 0.43
SFXN1-201ENST00000321442 TTC16Q8NEE8 873 aa17.75■□□□□ 0.43
SFXN1-201ENST00000321442 VTI1AQ96AJ9 217 aa17.75■□□□□ 0.43
SFXN1-201ENST00000321442 RILPQ96NA2 401 aa17.75■□□□□ 0.43
SFXN1-201ENST00000321442 NCAPGQ9BPX3 1015 aa17.75■□□□□ 0.43
SFXN1-201ENST00000321442 CNOT10Q9H9A5 744 aaKnown RBP17.75■□□□□ 0.43
SFXN1-201ENST00000321442 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.75■□□□□ 0.43
SFXN1-201ENST00000321442 CAPN6Q9Y6Q1 641 aa17.75■□□□□ 0.43
SFXN1-201ENST00000321442 PIK3C2AO00443 1686 aa17.75■□□□□ 0.43
SFXN1-201ENST00000321442 STAMBPO95630 424 aa17.75■□□□□ 0.43
SFXN1-201ENST00000321442 BAG2O95816 211 aa17.75■□□□□ 0.43
SFXN1-201ENST00000321442 MYL7Q01449 175 aa17.75■□□□□ 0.43
SFXN1-201ENST00000321442 MKRN4PQ13434 485 aaPredicted RBP17.75■□□□□ 0.43
SFXN1-201ENST00000321442 GRIK5Q16478 980 aa17.75■□□□□ 0.43
SFXN1-201ENST00000321442 ARMC9Q7Z3E5 817 aa17.75■□□□□ 0.43
SFXN1-201ENST00000321442 AMNQ9BXJ7 453 aa17.75■□□□□ 0.43
SFXN1-201ENST00000321442 UBE2TQ9NPD8 197 aaPredicted RBP17.75■□□□□ 0.43
SFXN1-201ENST00000321442 PDE4DIPQ5VU43 2346 aa17.75■□□□□ 0.43
SFXN1-201ENST00000321442 POTEB3A0JP26 581 aa17.74■□□□□ 0.43
SFXN1-201ENST00000321442 PHF20L1A8MW92 1017 aa17.74■□□□□ 0.43
SFXN1-201ENST00000321442 POTECB2RU33 542 aa17.74■□□□□ 0.43
SFXN1-201ENST00000321442 H0Y3Z8 333 aa17.74■□□□□ 0.43
SFXN1-201ENST00000321442 NTRK3Q16288 839 aa17.74■□□□□ 0.43
SFXN1-201ENST00000321442 POTEBQ6S5H4 581 aa17.74■□□□□ 0.43
SFXN1-201ENST00000321442 ZNF473Q8WTR7 871 aaKnown RBP17.74■□□□□ 0.43
SFXN1-201ENST00000321442 DPEP1P16444 411 aa17.74■□□□□ 0.43
SFXN1-201ENST00000321442 BMP6P22004 513 aa17.74■□□□□ 0.43
SFXN1-201ENST00000321442 MDH1P40925 334 aaKnown RBP17.74■□□□□ 0.43
SFXN1-201ENST00000321442 PSMD2Q13200 908 aa17.74■□□□□ 0.43
SFXN1-201ENST00000321442 SCYL3Q8IZE3 742 aa17.74■□□□□ 0.43
SFXN1-201ENST00000321442 GUF1Q8N442 669 aaKnown RBP17.74■□□□□ 0.43
SFXN1-201ENST00000321442 PIGOQ8TEQ8 1089 aa17.74■□□□□ 0.43
SFXN1-201ENST00000321442 CCDC17Q96LX7 622 aa17.74■□□□□ 0.43
SFXN1-201ENST00000321442 MAK16Q9BXY0 300 aaKnown RBP17.74■□□□□ 0.43
SFXN1-201ENST00000321442 WDR91A4D1P6 747 aa17.74■□□□□ 0.43
SFXN1-201ENST00000321442 ZBED4O75132 1171 aa17.74■□□□□ 0.43
SFXN1-201ENST00000321442 TROVE2P10155 538 aaKnown RBP eCLIP17.74■□□□□ 0.43
SFXN1-201ENST00000321442 DDR1Q08345 913 aa17.74■□□□□ 0.43
SFXN1-201ENST00000321442 SLC15A2Q16348 729 aa17.74■□□□□ 0.43
SFXN1-201ENST00000321442 LRRC8CQ8TDW0 803 aa17.74■□□□□ 0.43
SFXN1-201ENST00000321442 EHD4Q9H223 541 aa17.74■□□□□ 0.43
SFXN1-201ENST00000321442 VCXQ9H320 206 aa17.74■□□□□ 0.43
SFXN1-201ENST00000321442 RCAN1P53805 252 aa17.74■□□□□ 0.43
SFXN1-201ENST00000321442 COASYQ13057 564 aa17.74■□□□□ 0.43
SFXN1-201ENST00000321442 KCNB1Q14721 858 aa17.74■□□□□ 0.43
SFXN1-201ENST00000321442 CSADQ9Y600 493 aa17.74■□□□□ 0.43
SFXN1-201ENST00000321442 HNRNPH1P31943 449 aaKnown RBP17.73■□□□□ 0.43
SFXN1-201ENST00000321442 TRAPPC11Q7Z392 1133 aa17.73■□□□□ 0.43
SFXN1-201ENST00000321442 RNPC3Q96LT9 517 aaKnown RBP17.73■□□□□ 0.43
SFXN1-201ENST00000321442 FGFR2P21802 821 aa17.73■□□□□ 0.43
SFXN1-201ENST00000321442 TMED2Q15363 201 aa17.73■□□□□ 0.43
SFXN1-201ENST00000321442 CDC37Q16543 378 aaPredicted RBP17.73■□□□□ 0.43
SFXN1-201ENST00000321442 MTA3Q9BTC8 594 aa17.73■□□□□ 0.43
SFXN1-201ENST00000321442 INTS13Q9NVM9 706 aa17.73■□□□□ 0.43
SFXN1-201ENST00000321442 FLT1P17948 1338 aa17.73■□□□□ 0.43
SFXN1-201ENST00000321442 ECEL1O95672 775 aa17.73■□□□□ 0.43
SFXN1-201ENST00000321442 PDXDC1Q6P996 788 aa17.73■□□□□ 0.43
SFXN1-201ENST00000321442 GLYCTKQ8IVS8 523 aa17.73■□□□□ 0.43
SFXN1-201ENST00000321442 RAB3IPQ96QF0 476 aaPredicted RBP17.73■□□□□ 0.43
SFXN1-201ENST00000321442 TPX2Q9ULW0 747 aaKnown RBP17.73■□□□□ 0.43
SFXN1-201ENST00000321442 PVALEFA0A1B0GWK0 134 aa17.72■□□□□ 0.43
SFXN1-201ENST00000321442 EIF3BP55884 814 aaKnown RBP17.72■□□□□ 0.43
SFXN1-201ENST00000321442 TAF11Q15544 211 aa17.72■□□□□ 0.43
SFXN1-201ENST00000321442 ZNF746Q6NUN9 644 aaPredicted RBP17.72■□□□□ 0.43
SFXN1-201ENST00000321442 WDR93Q6P2C0 686 aa17.72■□□□□ 0.43
SFXN1-201ENST00000321442 LRP10Q7Z4F1 713 aa17.72■□□□□ 0.43
SFXN1-201ENST00000321442 EPN3Q9H201 632 aa17.72■□□□□ 0.43
SFXN1-201ENST00000321442 NOC2LQ9Y3T9 749 aaKnown RBP17.72■□□□□ 0.43
SFXN1-201ENST00000321442 KLRC1P26715 233 aa17.72■□□□□ 0.43
SFXN1-201ENST00000321442 ASPRV1Q53RT3 343 aa17.72■□□□□ 0.43
SFXN1-201ENST00000321442 FAM102BQ5T8I3 360 aa17.72■□□□□ 0.43
SFXN1-201ENST00000321442 SFR1Q86XK3 245 aa17.72■□□□□ 0.43
SFXN1-201ENST00000321442 CCDC89Q8N998 374 aa17.72■□□□□ 0.43
SFXN1-201ENST00000321442 KCNV2Q8TDN2 545 aa17.72■□□□□ 0.43
SFXN1-201ENST00000321442 SH2D3AQ9BRG2 576 aa17.72■□□□□ 0.43
SFXN1-201ENST00000321442 CCSER1Q9C0I3 900 aa17.72■□□□□ 0.43
SFXN1-201ENST00000321442 BARHL2Q9NY43 387 aa17.72■□□□□ 0.43
SFXN1-201ENST00000321442 RHOBTB3O94955 611 aa17.72■□□□□ 0.43
SFXN1-201ENST00000321442 PDE6CP51160 858 aa17.72■□□□□ 0.43
SFXN1-201ENST00000321442 CFAP157Q5JU67 520 aa17.72■□□□□ 0.43
SFXN1-201ENST00000321442 GPATCH4Q5T3I0 446 aaKnown RBP17.72■□□□□ 0.43
SFXN1-201ENST00000321442 DPY19L2Q6NUT2 758 aa17.72■□□□□ 0.43
SFXN1-201ENST00000321442 MIER3Q7Z3K6 550 aa17.72■□□□□ 0.43
SFXN1-201ENST00000321442 PALM2Q8IXS6 379 aa17.72■□□□□ 0.43
SFXN1-201ENST00000321442 ANKRD35Q8N283 1001 aa17.72■□□□□ 0.43
SFXN1-201ENST00000321442 FAM167BQ9BTA0 163 aa17.72■□□□□ 0.43
SFXN1-201ENST00000321442 HAUS2Q9NVX0 235 aa17.72■□□□□ 0.43
SFXN1-201ENST00000321442 F5H6K3 240 aa17.71■□□□□ 0.43
SFXN1-201ENST00000321442 EIF2AK2P19525 551 aaKnown RBP17.71■□□□□ 0.43
SFXN1-201ENST00000321442 IL9RQ01113 521 aa17.71■□□□□ 0.43
SFXN1-201ENST00000321442 KLRC3Q07444 240 aa17.71■□□□□ 0.43
SFXN1-201ENST00000321442 EARS2Q5JPH6 523 aaKnown RBP17.71■□□□□ 0.43
SFXN1-201ENST00000321442 CDC42EP5Q6NZY7 148 aa17.71■□□□□ 0.43
SFXN1-201ENST00000321442 SAMD7Q7Z3H4 446 aa17.71■□□□□ 0.43
SFXN1-201ENST00000321442 NCAPG2Q86XI2 1143 aa17.71■□□□□ 0.43
SFXN1-201ENST00000321442 RTKN2Q8IZC4 609 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 160.7 ms