RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 ECM1Q16610 540 aa15.62■□□□□ 0.09
VRK3-201ENST00000316763 RNF207Q6ZRF8 634 aa15.62■□□□□ 0.09
VRK3-201ENST00000316763 CYP2W1Q8TAV3 490 aa15.62■□□□□ 0.09
VRK3-201ENST00000316763 HNRNPLLQ8WVV9 542 aaKnown RBP15.62■□□□□ 0.09
VRK3-201ENST00000316763 MMRN2Q9H8L6 949 aa15.62■□□□□ 0.09
VRK3-201ENST00000316763 ZCCHC17Q9NP64 241 aaKnown RBP15.62■□□□□ 0.09
VRK3-201ENST00000316763 SIK3Q9Y2K2 1263 aa15.62■□□□□ 0.09
VRK3-201ENST00000316763 A0A0G2JMZ2 1700 aa15.62■□□□□ 0.09
VRK3-201ENST00000316763 PEX10O60683 326 aa15.62■□□□□ 0.09
VRK3-201ENST00000316763 TBC1D8O95759 1140 aa15.62■□□□□ 0.09
VRK3-201ENST00000316763 GNA14O95837 355 aa15.62■□□□□ 0.09
VRK3-201ENST00000316763 PLA2G4BP0C869 781 aa15.62■□□□□ 0.09
VRK3-201ENST00000316763 KIF5AQ12840 1032 aa15.62■□□□□ 0.09
VRK3-201ENST00000316763 TERF2Q15554 542 aa15.62■□□□□ 0.09
VRK3-201ENST00000316763 CEP55Q53EZ4 464 aa15.62■□□□□ 0.09
VRK3-201ENST00000316763 HAUS3Q68CZ6 603 aa15.62■□□□□ 0.09
VRK3-201ENST00000316763 SLC30A10Q6XR72 485 aa15.62■□□□□ 0.09
VRK3-201ENST00000316763 ZNF771Q7L3S4 317 aaPredicted RBP15.62■□□□□ 0.09
VRK3-201ENST00000316763 TRAPPC11Q7Z392 1133 aa15.62■□□□□ 0.09
VRK3-201ENST00000316763 REM2Q8IYK8 340 aaPredicted RBP15.62■□□□□ 0.09
VRK3-201ENST00000316763 ERMNQ8TAM6 284 aa15.62■□□□□ 0.09
VRK3-201ENST00000316763 GJA10Q969M2 543 aa15.62■□□□□ 0.09
VRK3-201ENST00000316763 CEP63Q96MT8 703 aa15.62■□□□□ 0.09
VRK3-201ENST00000316763 GBP3Q9H0R5 595 aa15.62■□□□□ 0.09
VRK3-201ENST00000316763 BTBD7Q9P203 1132 aa15.62■□□□□ 0.09
VRK3-201ENST00000316763 TRIM10Q9UDY6 481 aa15.62■□□□□ 0.09
VRK3-201ENST00000316763 RAB21Q9UL25 225 aa15.62■□□□□ 0.09
VRK3-201ENST00000316763 PLAGL2Q9UPG8 496 aa15.62■□□□□ 0.09
VRK3-201ENST00000316763 KIAA1024Q9UPX6 916 aa15.62■□□□□ 0.09
VRK3-201ENST00000316763 MEIS1O00470 390 aa15.61■□□□□ 0.09
VRK3-201ENST00000316763 MSH4O15457 936 aa15.61■□□□□ 0.09
VRK3-201ENST00000316763 ZNF76P36508 570 aa15.61■□□□□ 0.09
VRK3-201ENST00000316763 VAV2P52735 878 aa15.61■□□□□ 0.09
VRK3-201ENST00000316763 SPIRE1Q08AE8 756 aa15.61■□□□□ 0.09
VRK3-201ENST00000316763 TAF1CQ15572 869 aaPredicted RBP15.61■□□□□ 0.09
VRK3-201ENST00000316763 LRRC55Q6ZSA7 311 aa15.61■□□□□ 0.09
VRK3-201ENST00000316763 RIOX2Q8IUF8 465 aa15.61■□□□□ 0.09
VRK3-201ENST00000316763 TXLNBQ8N3L3 684 aa15.61■□□□□ 0.09
VRK3-201ENST00000316763 SMCR8Q8TEV9 937 aaPredicted RBP15.61■□□□□ 0.09
VRK3-201ENST00000316763 ACAD9Q9H845 621 aa15.61■□□□□ 0.09
VRK3-201ENST00000316763 ANKZF1Q9H8Y5 726 aa15.61■□□□□ 0.09
VRK3-201ENST00000316763 RBPJLQ9UBG7 517 aa15.61■□□□□ 0.09
VRK3-201ENST00000316763 COL4A3BPQ9Y5P4 624 aa15.61■□□□□ 0.09
VRK3-201ENST00000316763 SAR1BQ9Y6B6 198 aa15.61■□□□□ 0.09
VRK3-201ENST00000316763 ANO9A1A5B4 782 aa15.6■□□□□ 0.09
VRK3-201ENST00000316763 UBXN2AP68543 259 aa15.6■□□□□ 0.09
VRK3-201ENST00000316763 CKAP4Q07065 602 aaKnown RBP15.6■□□□□ 0.09
VRK3-201ENST00000316763 BAATQ14032 418 aaPredicted RBP15.6■□□□□ 0.09
VRK3-201ENST00000316763 LRRC41Q15345 812 aa15.6■□□□□ 0.09
VRK3-201ENST00000316763 LONRF2Q1L5Z9 754 aa15.6■□□□□ 0.09
VRK3-201ENST00000316763 CCDC40Q4G0X9 1142 aa15.6■□□□□ 0.09
VRK3-201ENST00000316763 PAPD7Q5XG87 772 aaKnown RBP15.6■□□□□ 0.09
VRK3-201ENST00000316763 PCNX4Q63HM2 1172 aa15.6■□□□□ 0.09
VRK3-201ENST00000316763 NSMFQ6X4W1 530 aa15.6■□□□□ 0.09
VRK3-201ENST00000316763 GPBP1Q86WP2 473 aa15.6■□□□□ 0.09
VRK3-201ENST00000316763 CHST13Q8NET6 341 aa15.6■□□□□ 0.09
VRK3-201ENST00000316763 NEK11Q8NG66 645 aa15.6■□□□□ 0.09
VRK3-201ENST00000316763 RPGRIP1Q96KN7 1286 aa15.6■□□□□ 0.09
VRK3-201ENST00000316763 TAAR1Q96RJ0 339 aa15.6■□□□□ 0.09
VRK3-201ENST00000316763 PARK7Q99497 189 aaKnown RBP15.6■□□□□ 0.09
VRK3-201ENST00000316763 DEF6Q9H4E7 631 aa15.6■□□□□ 0.09
VRK3-201ENST00000316763 TXNRD2Q9NNW7 524 aa15.6■□□□□ 0.09
VRK3-201ENST00000316763 CNMDO75829 334 aa15.6■□□□□ 0.09
VRK3-201ENST00000316763 KRT18P05783 430 aaKnown RBP15.6■□□□□ 0.09
VRK3-201ENST00000316763 PLS1Q14651 629 aa15.6■□□□□ 0.09
VRK3-201ENST00000316763 NIPA1Q7RTP0 329 aa15.6■□□□□ 0.09
VRK3-201ENST00000316763 MXRA8Q9BRK3 442 aa15.6■□□□□ 0.09
VRK3-201ENST00000316763 PAGR1Q9BTK6 254 aa15.6■□□□□ 0.09
VRK3-201ENST00000316763 NUCKS1Q9H1E3 243 aaKnown RBP15.6■□□□□ 0.09
VRK3-201ENST00000316763 FAM207AQ9NSI2 230 aaPredicted RBP15.6■□□□□ 0.09
VRK3-201ENST00000316763 THSD7BQ9C0I4 1608 aa15.6■□□□□ 0.09
VRK3-201ENST00000316763 E9PMD0 336 aa15.59■□□□□ 0.09
VRK3-201ENST00000316763 BCRP11274 1271 aa15.59■□□□□ 0.09
VRK3-201ENST00000316763 SETQ01105 290 aaPredicted RBP15.59■□□□□ 0.09
VRK3-201ENST00000316763 GPS2Q13227 327 aa15.59■□□□□ 0.09
VRK3-201ENST00000316763 ZCWPW2Q504Y3 356 aa15.59■□□□□ 0.09
VRK3-201ENST00000316763 HERC4Q5GLZ8 1057 aaPredicted RBP15.59■□□□□ 0.09
VRK3-201ENST00000316763 CACNA2D4Q7Z3S7 1137 aa15.59■□□□□ 0.09
VRK3-201ENST00000316763 IL31RAQ8NI17 732 aa15.59■□□□□ 0.09
VRK3-201ENST00000316763 SECISBP2LQ93073 1101 aaKnown RBP15.59■□□□□ 0.09
VRK3-201ENST00000316763 PURBQ96QR8 312 aaKnown RBP15.59■□□□□ 0.09
VRK3-201ENST00000316763 RMDN3Q96TC7 470 aa15.59■□□□□ 0.09
VRK3-201ENST00000316763 SPATC1LQ9H0A9 340 aa15.59■□□□□ 0.09
VRK3-201ENST00000316763 A1CFQ9NQ94 594 aaKnown RBP15.59■□□□□ 0.09
VRK3-201ENST00000316763 PXMP2Q9NR77 195 aa15.59■□□□□ 0.09
VRK3-201ENST00000316763 CYP39A1Q9NYL5 469 aa15.59■□□□□ 0.09
VRK3-201ENST00000316763 RBBP6Q7Z6E9 1792 aaKnown RBP15.59■□□□□ 0.09
VRK3-201ENST00000316763 POTEB3A0JP26 581 aa15.58■□□□□ 0.09
VRK3-201ENST00000316763 RHOXF2BP0C7M4 288 aa15.58■□□□□ 0.09
VRK3-201ENST00000316763 ITGB5P18084 799 aa15.58■□□□□ 0.09
VRK3-201ENST00000316763 MCM3P25205 808 aa15.58■□□□□ 0.09
VRK3-201ENST00000316763 GCLCP48506 637 aaPredicted RBP15.58■□□□□ 0.09
VRK3-201ENST00000316763 MRPS9P82933 396 aaKnown RBP15.58■□□□□ 0.09
VRK3-201ENST00000316763 PGM5Q15124 567 aa15.58■□□□□ 0.09
VRK3-201ENST00000316763 Q3C1V9 767 aa15.58■□□□□ 0.09
VRK3-201ENST00000316763 POTEBQ6S5H4 581 aa15.58■□□□□ 0.09
VRK3-201ENST00000316763 PPP4R3CPQ6ZMV5 832 aa15.58■□□□□ 0.09
VRK3-201ENST00000316763 HDXQ7Z353 690 aa15.58■□□□□ 0.09
VRK3-201ENST00000316763 DNAJC5GQ8N7S2 189 aa15.58■□□□□ 0.09
VRK3-201ENST00000316763 SLC5A5Q92911 643 aa15.58■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms