RNA–Protein interactions for RNA: ENST00000311330.3

CD248-201, Transcript of CD248 molecule, humanhuman

APPRIS P1 BASIC

Gene CD248, Length 2,558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD248-201ENST00000311330 B3GNT9Q6UX72 402 aa20.2■□□□□ 0.82
CD248-201ENST00000311330 SYN2Q92777 582 aaPredicted RBP20.2■□□□□ 0.82
CD248-201ENST00000311330 SLC35C1Q96A29 364 aa20.2■□□□□ 0.82
CD248-201ENST00000311330 HINFPQ9BQA5 517 aa20.2■□□□□ 0.82
CD248-201ENST00000311330 SH2D3AQ9BRG2 576 aa20.2■□□□□ 0.82
CD248-201ENST00000311330 JRKLQ9Y4A0 524 aa20.2■□□□□ 0.82
CD248-201ENST00000311330 NFKBIEO00221 500 aa20.19■□□□□ 0.82
CD248-201ENST00000311330 POLR3GO15318 223 aaPredicted RBP20.19■□□□□ 0.82
CD248-201ENST00000311330 FLOT1O75955 427 aa20.19■□□□□ 0.82
CD248-201ENST00000311330 EPB41P11171 864 aaKnown RBP20.19■□□□□ 0.82
CD248-201ENST00000311330 RPL13P26373 211 aaKnown RBP20.19■□□□□ 0.82
CD248-201ENST00000311330 SETQ01105 290 aaPredicted RBP20.19■□□□□ 0.82
CD248-201ENST00000311330 ASIC2Q16515 512 aa20.19■□□□□ 0.82
CD248-201ENST00000311330 EXOC3L4Q17RC7 722 aa20.19■□□□□ 0.82
CD248-201ENST00000311330 NFRKBQ6P4R8 1299 aa20.19■□□□□ 0.82
CD248-201ENST00000311330 GJB7Q6PEY0 223 aa20.19■□□□□ 0.82
CD248-201ENST00000311330 DNAAF5Q86Y56 855 aa20.19■□□□□ 0.82
CD248-201ENST00000311330 FIZ1Q96SL8 496 aa20.19■□□□□ 0.82
CD248-201ENST00000311330 NUCKS1Q9H1E3 243 aaKnown RBP20.19■□□□□ 0.82
CD248-201ENST00000311330 ZCCHC17Q9NP64 241 aaKnown RBP20.19■□□□□ 0.82
CD248-201ENST00000311330 SMARCAL1Q9NZC9 954 aa20.19■□□□□ 0.82
CD248-201ENST00000311330 AJAP1Q9UKB5 411 aaPredicted RBP20.19■□□□□ 0.82
CD248-201ENST00000311330 SNX12Q9UMY4 172 aa20.19■□□□□ 0.82
CD248-201ENST00000311330 FZD1Q9UP38 647 aa20.19■□□□□ 0.82
CD248-201ENST00000311330 RBBP6Q7Z6E9 1792 aaKnown RBP20.19■□□□□ 0.82
CD248-201ENST00000311330 FRMPD4Q14CM0 1322 aa20.19■□□□□ 0.82
CD248-201ENST00000311330 ZMYND10O75800 440 aa20.19■□□□□ 0.82
CD248-201ENST00000311330 UCHL3P15374 230 aa20.19■□□□□ 0.82
CD248-201ENST00000311330 ODR4Q5SWX8 454 aa20.19■□□□□ 0.82
CD248-201ENST00000311330 PACSIN1Q9BY11 444 aa20.19■□□□□ 0.82
CD248-201ENST00000311330 PJA2O43164 708 aa20.18■□□□□ 0.82
CD248-201ENST00000311330 ATP8B1O43520 1251 aa20.18■□□□□ 0.82
CD248-201ENST00000311330 EIF2AK2P19525 551 aaKnown RBP20.18■□□□□ 0.82
CD248-201ENST00000311330 C2orf54Q08AI8 447 aa20.18■□□□□ 0.82
CD248-201ENST00000311330 ITGB3BPQ13352 177 aaPredicted RBP20.18■□□□□ 0.82
CD248-201ENST00000311330 MTMR2Q13614 643 aa20.18■□□□□ 0.82
CD248-201ENST00000311330 KLHDC7AQ5VTJ3 777 aa20.18■□□□□ 0.82
CD248-201ENST00000311330 MIER3Q7Z3K6 550 aa20.18■□□□□ 0.82
CD248-201ENST00000311330 FAM178BQ8IXR5 827 aa20.18■□□□□ 0.82
CD248-201ENST00000311330 SLC16A10Q8TF71 515 aa20.18■□□□□ 0.82
CD248-201ENST00000311330 EHD2Q9NZN4 543 aa20.18■□□□□ 0.82
CD248-201ENST00000311330 GJA3Q9Y6H8 435 aa20.18■□□□□ 0.82
CD248-201ENST00000311330 RBAK-RBAKDNI3L0D1 243 aa20.18■□□□□ 0.82
CD248-201ENST00000311330 WDR46O15213 610 aaKnown RBP20.18■□□□□ 0.82
CD248-201ENST00000311330 CYP2J2P51589 502 aa20.18■□□□□ 0.82
CD248-201ENST00000311330 USP14P54578 494 aa20.18■□□□□ 0.82
CD248-201ENST00000311330 MRPS9P82933 396 aaKnown RBP20.18■□□□□ 0.82
CD248-201ENST00000311330 PRAMEF18Q5VWM3 479 aa20.18■□□□□ 0.82
CD248-201ENST00000311330 ARHGAP27Q6ZUM4 889 aa20.18■□□□□ 0.82
CD248-201ENST00000311330 ZNF720Q7Z2F6 126 aa20.18■□□□□ 0.82
CD248-201ENST00000311330 TAAR1Q96RJ0 339 aa20.18■□□□□ 0.82
CD248-201ENST00000311330 AIPL1Q9NZN9 384 aa20.18■□□□□ 0.82
CD248-201ENST00000311330 ARHGEF35A5YM69 484 aa20.17■□□□□ 0.82
CD248-201ENST00000311330 HIP1RO75146 1068 aa20.17■□□□□ 0.82
CD248-201ENST00000311330 TUBB4BP68371 445 aa20.17■□□□□ 0.82
CD248-201ENST00000311330 GABPB1Q06547 395 aaPredicted RBP20.17■□□□□ 0.82
CD248-201ENST00000311330 NBPF12Q5TAG4 269 aaPredicted RBP20.17■□□□□ 0.82
CD248-201ENST00000311330 CREG2Q8IUH2 290 aa20.17■□□□□ 0.82
CD248-201ENST00000311330 TEX2Q8IWB9 1127 aa20.17■□□□□ 0.82
CD248-201ENST00000311330 MICALL2Q8IY33 904 aa20.17■□□□□ 0.82
CD248-201ENST00000311330 SPAG5Q96R06 1193 aa20.17■□□□□ 0.82
CD248-201ENST00000311330 SAMM50Q9Y512 469 aa20.17■□□□□ 0.82
CD248-201ENST00000311330 ATAD5Q96QE3 1844 aa20.17■□□□□ 0.82
CD248-201ENST00000311330 RPTORQ8N122 1335 aa20.17■□□□□ 0.82
CD248-201ENST00000311330 TMEM150BA6NC51 233 aa20.17■□□□□ 0.82
CD248-201ENST00000311330 DHX15O43143 795 aaKnown RBP20.17■□□□□ 0.82
CD248-201ENST00000311330 GMPSP49915 693 aaPredicted RBP20.17■□□□□ 0.82
CD248-201ENST00000311330 PTK2Q05397 1052 aa20.17■□□□□ 0.82
CD248-201ENST00000311330 TNIP1Q15025 636 aa20.17■□□□□ 0.82
CD248-201ENST00000311330 TERF2Q15554 542 aa20.17■□□□□ 0.82
CD248-201ENST00000311330 TKFCQ3LXA3 575 aa20.17■□□□□ 0.82
CD248-201ENST00000311330 RBM46Q8TBY0 533 aaKnown RBP20.17■□□□□ 0.82
CD248-201ENST00000311330 SYTL5Q8TDW5 730 aaPredicted RBP20.17■□□□□ 0.82
CD248-201ENST00000311330 HNRNPLLQ8WVV9 542 aaKnown RBP20.17■□□□□ 0.82
CD248-201ENST00000311330 WNK4Q96J92 1243 aa20.17■□□□□ 0.82
CD248-201ENST00000311330 ALS2CR12Q96Q35 445 aa20.17■□□□□ 0.82
CD248-201ENST00000311330 RIT2Q99578 217 aa20.17■□□□□ 0.82
CD248-201ENST00000311330 KIAA1683Q9H0B3 1180 aa20.17■□□□□ 0.82
CD248-201ENST00000311330 EIF3DO15371 548 aaKnown RBP eCLIP20.16■□□□□ 0.82
CD248-201ENST00000311330 DNA2P51530 1060 aa20.16■□□□□ 0.82
CD248-201ENST00000311330 CKAP4Q07065 602 aaKnown RBP20.16■□□□□ 0.82
CD248-201ENST00000311330 SMC1AQ14683 1233 aaKnown RBP20.16■□□□□ 0.82
CD248-201ENST00000311330 SLC18A3Q16572 532 aa20.16■□□□□ 0.82
CD248-201ENST00000311330 IRF2BP2Q7Z5L9 587 aa20.16■□□□□ 0.82
CD248-201ENST00000311330 FAM186BQ8IYM0 893 aa20.16■□□□□ 0.82
CD248-201ENST00000311330 DAW1Q8N136 415 aa20.16■□□□□ 0.82
CD248-201ENST00000311330 KCTD17Q8N5Z5 321 aa20.16■□□□□ 0.82
CD248-201ENST00000311330 BORCS6Q96GS4 357 aa20.16■□□□□ 0.82
CD248-201ENST00000311330 DEFB129Q9H1M3 183 aa20.16■□□□□ 0.82
CD248-201ENST00000311330 SLC38A10Q9HBR0 1119 aa20.16■□□□□ 0.82
CD248-201ENST00000311330 METTL14Q9HCE5 456 aaKnown RBP20.16■□□□□ 0.82
CD248-201ENST00000311330 SIX2Q9NPC8 291 aa20.16■□□□□ 0.82
CD248-201ENST00000311330 GCNT4Q9P109 453 aa20.16■□□□□ 0.82
CD248-201ENST00000311330 SLC16A3O15427 465 aaKnown RBP20.16■□□□□ 0.82
CD248-201ENST00000311330 MYCLP12524 364 aaPredicted RBP20.16■□□□□ 0.82
CD248-201ENST00000311330 VCAM1P19320 739 aa20.16■□□□□ 0.82
CD248-201ENST00000311330 KLRC1P26715 233 aa20.16■□□□□ 0.82
CD248-201ENST00000311330 ZNF131P52739 623 aa20.16■□□□□ 0.82
CD248-201ENST00000311330 ZNF280AP59817 542 aaPredicted RBP20.16■□□□□ 0.82
CD248-201ENST00000311330 MRPS25P82663 173 aaKnown RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms