RNA–Protein interactions for RNA: ENST00000303434.8

TRABD-201, Transcript of TraB domain containing, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRABD, Length 2,329 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD-201ENST00000303434 FKBP15Q5T1M5 1219 aa20.32■□□□□ 0.84
TRABD-201ENST00000303434 ANKRD23Q86SG2 305 aa20.32■□□□□ 0.84
TRABD-201ENST00000303434 SDCCAG8Q86SQ7 713 aaPredicted RBP20.32■□□□□ 0.84
TRABD-201ENST00000303434 CLEC10AQ8IUN9 316 aa20.32■□□□□ 0.84
TRABD-201ENST00000303434 ZSCAN29Q8IWY8 852 aaPredicted RBP20.32■□□□□ 0.84
TRABD-201ENST00000303434 RBM12BQ8IXT5 1001 aaKnown RBP20.32■□□□□ 0.84
TRABD-201ENST00000303434 OSBPL1AQ9BXW6 950 aa20.32■□□□□ 0.84
TRABD-201ENST00000303434 PLCB1Q9NQ66 1216 aa20.32■□□□□ 0.84
TRABD-201ENST00000303434 DDX4Q9NQI0 724 aaKnown RBP20.32■□□□□ 0.84
TRABD-201ENST00000303434 STK17AQ9UEE5 414 aa20.32■□□□□ 0.84
TRABD-201ENST00000303434 SWAP70Q9UH65 585 aa20.32■□□□□ 0.84
TRABD-201ENST00000303434 HYOU1Q9Y4L1 999 aa20.32■□□□□ 0.84
TRABD-201ENST00000303434 MACROD2A1Z1Q3 448 aa20.32■□□□□ 0.84
TRABD-201ENST00000303434 MYMKA6NI61 221 aa20.32■□□□□ 0.84
TRABD-201ENST00000303434 ABLIM1O14639 778 aa20.32■□□□□ 0.84
TRABD-201ENST00000303434 ZBED6P86452 979 aa20.32■□□□□ 0.84
TRABD-201ENST00000303434 TMEM266Q2M3C6 531 aa20.32■□□□□ 0.84
TRABD-201ENST00000303434 CENPPQ6IPU0 288 aa20.32■□□□□ 0.84
TRABD-201ENST00000303434 CCDC197Q8NCU1 140 aa20.32■□□□□ 0.84
TRABD-201ENST00000303434 ZNF526Q8TF50 670 aaPredicted RBP20.32■□□□□ 0.84
TRABD-201ENST00000303434 GORASP1Q9BQQ3 440 aa20.32■□□□□ 0.84
TRABD-201ENST00000303434 KLRG2A4D1S0 409 aaPredicted RBP20.31■□□□□ 0.84
TRABD-201ENST00000303434 HSPA9P38646 679 aaKnown RBP20.31■□□□□ 0.84
TRABD-201ENST00000303434 HHATQ5VTY9 493 aa20.31■□□□□ 0.84
TRABD-201ENST00000303434 SP8Q8IXZ3 490 aa20.31■□□□□ 0.84
TRABD-201ENST00000303434 ANKS4BQ8N8V4 417 aa20.31■□□□□ 0.84
TRABD-201ENST00000303434 LARP4BQ92615 738 aaKnown RBP20.31■□□□□ 0.84
TRABD-201ENST00000303434 PCMTD1Q96MG8 357 aaPredicted RBP20.31■□□□□ 0.84
TRABD-201ENST00000303434 JMJD4Q9H9V9 463 aa20.31■□□□□ 0.84
TRABD-201ENST00000303434 ZNHIT6Q9NWK9 470 aaKnown RBP20.31■□□□□ 0.84
TRABD-201ENST00000303434 PVALEFA0A1B0GWK0 134 aa20.31■□□□□ 0.84
TRABD-201ENST00000303434 NKRFO15226 690 aaKnown RBP eCLIP20.31■□□□□ 0.847e-7■■■□□ 19.2
TRABD-201ENST00000303434 TTLL1O95922 423 aa20.31■□□□□ 0.84
TRABD-201ENST00000303434 GLI1P08151 1106 aa20.31■□□□□ 0.84
TRABD-201ENST00000303434 RANBP1P43487 201 aa20.31■□□□□ 0.84
TRABD-201ENST00000303434 PPP2R2AP63151 447 aa20.31■□□□□ 0.84
TRABD-201ENST00000303434 UNC13DQ70J99 1090 aa20.31■□□□□ 0.84
TRABD-201ENST00000303434 TBC1D1Q86TI0 1168 aaPredicted RBP20.31■□□□□ 0.84
TRABD-201ENST00000303434 CDK5RAP3Q96JB5 506 aa20.31■□□□□ 0.84
TRABD-201ENST00000303434 ERGIC2Q96RQ1 377 aa20.31■□□□□ 0.84
TRABD-201ENST00000303434 RAB34Q9BZG1 259 aa20.31■□□□□ 0.84
TRABD-201ENST00000303434 SUDS3Q9H7L9 328 aaPredicted RBP20.31■□□□□ 0.84
TRABD-201ENST00000303434 DUSP10Q9Y6W6 482 aa20.31■□□□□ 0.84
TRABD-201ENST00000303434 PNMA6FA0A0J9YX94 578 aa20.3■□□□□ 0.84
TRABD-201ENST00000303434 POLRMTO00411 1230 aaKnown RBP20.3■□□□□ 0.84
TRABD-201ENST00000303434 FAM163BP0C2L3 166 aa20.3■□□□□ 0.84
TRABD-201ENST00000303434 PYGBP11216 843 aa20.3■□□□□ 0.84
TRABD-201ENST00000303434 CNGA1P29973 690 aa20.3■□□□□ 0.84
TRABD-201ENST00000303434 IFI16Q16666 785 aaKnown RBP20.3■□□□□ 0.84
TRABD-201ENST00000303434 RUFY4Q6ZNE9 571 aa20.3■□□□□ 0.84
TRABD-201ENST00000303434 ADGRF4Q8IZF3 695 aa20.3■□□□□ 0.84
TRABD-201ENST00000303434 IFT81Q8WYA0 676 aa20.3■□□□□ 0.84
TRABD-201ENST00000303434 COA1Q9GZY4 146 aa20.3■□□□□ 0.84
TRABD-201ENST00000303434 EPB41L5Q9HCM4 733 aa20.3■□□□□ 0.84
TRABD-201ENST00000303434 SERPINB13Q9UIV8 391 aa20.3■□□□□ 0.84
TRABD-201ENST00000303434 SUGT1Q9Y2Z0 365 aa20.3■□□□□ 0.84
TRABD-201ENST00000303434 LTBP1Q14766 1721 aa20.3■□□□□ 0.84
TRABD-201ENST00000303434 LRRD1A4D1F6 860 aa20.3■□□□□ 0.84
TRABD-201ENST00000303434 POTEMA6NI47 508 aa20.3■□□□□ 0.84
TRABD-201ENST00000303434 ONECUT3O60422 494 aaPredicted RBP20.3■□□□□ 0.84
TRABD-201ENST00000303434 NPTXRO95502 500 aa20.3■□□□□ 0.84
TRABD-201ENST00000303434 TMOD1P28289 359 aa20.3■□□□□ 0.84
TRABD-201ENST00000303434 GUCY2FP51841 1108 aa20.3■□□□□ 0.84
TRABD-201ENST00000303434 ZNF543Q08ER8 600 aa20.3■□□□□ 0.84
TRABD-201ENST00000303434 SEPT2Q15019 361 aa20.3■□□□□ 0.84
TRABD-201ENST00000303434 DYMQ7RTS9 669 aa20.3■□□□□ 0.84
TRABD-201ENST00000303434 CERS5Q8N5B7 392 aa20.3■□□□□ 0.84
TRABD-201ENST00000303434 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.3■□□□□ 0.841e-6■■■■■ 56.2
TRABD-201ENST00000303434 NUDT12Q9BQG2 462 aa20.3■□□□□ 0.84
TRABD-201ENST00000303434 NHEJ1Q9H9Q4 299 aaPredicted RBP20.3■□□□□ 0.84
TRABD-201ENST00000303434 RIC8AQ9NPQ8 531 aa20.3■□□□□ 0.84
TRABD-201ENST00000303434 RBM12Q9NTZ6 932 aaKnown RBP20.3■□□□□ 0.84
TRABD-201ENST00000303434 PPEF1O14829 653 aaPredicted RBP20.29■□□□□ 0.84
TRABD-201ENST00000303434 ITIH4Q14624 930 aa20.29■□□□□ 0.84
TRABD-201ENST00000303434 FIGNQ5HY92 759 aa20.29■□□□□ 0.84
TRABD-201ENST00000303434 ANKRD20A2Q5SQ80 823 aa20.29■□□□□ 0.84
TRABD-201ENST00000303434 ANKRD20A1Q5TYW2 823 aa20.29■□□□□ 0.84
TRABD-201ENST00000303434 ANKRD20A3Q5VUR7 823 aa20.29■□□□□ 0.84
TRABD-201ENST00000303434 TMC4Q7Z404 712 aa20.29■□□□□ 0.84
TRABD-201ENST00000303434 SEPT12Q8IYM1 358 aa20.29■□□□□ 0.84
TRABD-201ENST00000303434 RBM41Q96IZ5 413 aaKnown RBP20.29■□□□□ 0.84
TRABD-201ENST00000303434 USP40Q9NVE5 1235 aa20.29■□□□□ 0.84
TRABD-201ENST00000303434 DPPA5A6NC42 116 aa20.28■□□□□ 0.84
TRABD-201ENST00000303434 PHF20L1A8MW92 1017 aa20.28■□□□□ 0.84
TRABD-201ENST00000303434 PPP1R11O60927 126 aaPredicted RBP20.28■□□□□ 0.84
TRABD-201ENST00000303434 HEXIM1O94992 359 aaKnown RBP20.28■□□□□ 0.84
TRABD-201ENST00000303434 TNNI2P48788 182 aa20.28■□□□□ 0.84
TRABD-201ENST00000303434 KIAA0753Q2KHM9 967 aa20.28■□□□□ 0.84
TRABD-201ENST00000303434 AGBL2Q5U5Z8 902 aa20.28■□□□□ 0.84
TRABD-201ENST00000303434 TTBK2Q6IQ55 1244 aa20.28■□□□□ 0.84
TRABD-201ENST00000303434 RAD54LQ92698 747 aa20.28■□□□□ 0.84
TRABD-201ENST00000303434 GOLGA6L10A0A0M3HER8 536 aa20.28■□□□□ 0.84
TRABD-201ENST00000303434 A0A1W2PQJ5 194 aa20.28■□□□□ 0.84
TRABD-201ENST00000303434 GUCY2DQ02846 1103 aa20.28■□□□□ 0.84
TRABD-201ENST00000303434 CUL3Q13618 768 aa20.28■□□□□ 0.84
TRABD-201ENST00000303434 UBE2SQ16763 222 aa20.28■□□□□ 0.84
TRABD-201ENST00000303434 LRRC23Q53EV4 343 aaPredicted RBP20.28■□□□□ 0.84
TRABD-201ENST00000303434 KRT79Q5XKE5 535 aa20.28■□□□□ 0.84
TRABD-201ENST00000303434 CCDC155Q8N6L0 562 aa20.28■□□□□ 0.84
TRABD-201ENST00000303434 SNX29Q8TEQ0 813 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms