RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 ZBED1O96006 694 aa18.61■□□□□ 0.57
SHANK1-201ENST00000293441 PMLP29590 882 aa18.61■□□□□ 0.57
SHANK1-201ENST00000293441 TNFAIP2Q03169 654 aa18.61■□□□□ 0.57
SHANK1-201ENST00000293441 TTLL4Q14679 1199 aa18.61■□□□□ 0.57
SHANK1-201ENST00000293441 PASD1Q8IV76 773 aa18.61■□□□□ 0.57
SHANK1-201ENST00000293441 SDCCAG3Q96C92 435 aa18.61■□□□□ 0.57
SHANK1-201ENST00000293441 GJD4Q96KN9 370 aaPredicted RBP18.61■□□□□ 0.57
SHANK1-201ENST00000293441 SLC16A4O15374 487 aa18.6■□□□□ 0.57
SHANK1-201ENST00000293441 ENOX1Q8TC92 643 aaKnown RBP18.6■□□□□ 0.57
SHANK1-201ENST00000293441 URGCPQ8TCY9 931 aa18.6■□□□□ 0.57
SHANK1-201ENST00000293441 POLD4Q9HCU8 107 aa18.6■□□□□ 0.57
SHANK1-201ENST00000293441 PBKQ96KB5 322 aa18.6■□□□□ 0.57
SHANK1-201ENST00000293441 NVLO15381 856 aaKnown RBP18.6■□□□□ 0.57
SHANK1-201ENST00000293441 SWSAP1Q6NVH7 229 aa18.6■□□□□ 0.57
SHANK1-201ENST00000293441 PADI6Q6TGC4 694 aa18.6■□□□□ 0.57
SHANK1-201ENST00000293441 TNS3Q68CZ2 1445 aa18.6■□□□□ 0.57
SHANK1-201ENST00000293441 GPC3P51654 580 aa18.6■□□□□ 0.57
SHANK1-201ENST00000293441 SFR1Q86XK3 245 aa18.6■□□□□ 0.57
SHANK1-201ENST00000293441 NUDCD1Q96RS6 583 aa18.6■□□□□ 0.57
SHANK1-201ENST00000293441 FAM213AQ9BRX8 229 aa18.6■□□□□ 0.57
SHANK1-201ENST00000293441 PDE11AQ9HCR9 933 aa18.6■□□□□ 0.57
SHANK1-201ENST00000293441 KIF3CO14782 793 aa18.6■□□□□ 0.57
SHANK1-201ENST00000293441 ZBED6P86452 979 aa18.6■□□□□ 0.57
SHANK1-201ENST00000293441 MB21D1Q8N884 522 aa18.6■□□□□ 0.57
SHANK1-201ENST00000293441 AP1M1Q9BXS5 423 aa18.6■□□□□ 0.57
SHANK1-201ENST00000293441 DCP1AQ9NPI6 582 aaPredicted RBP18.6■□□□□ 0.57
SHANK1-201ENST00000293441 CAPN7Q9Y6W3 813 aa18.6■□□□□ 0.57
SHANK1-201ENST00000293441 ZBBXA8MT70 800 aa18.59■□□□□ 0.57
SHANK1-201ENST00000293441 CUL4AQ13619 759 aa18.59■□□□□ 0.57
SHANK1-201ENST00000293441 ZNF699Q32M78 642 aa18.59■□□□□ 0.57
SHANK1-201ENST00000293441 MOSPD1Q9UJG1 213 aa18.59■□□□□ 0.57
SHANK1-201ENST00000293441 GABPB1Q06547 395 aaPredicted RBP18.59■□□□□ 0.57
SHANK1-201ENST00000293441 TXNRD1Q16881 649 aa18.59■□□□□ 0.57
SHANK1-201ENST00000293441 ADGRF4Q8IZF3 695 aa18.59■□□□□ 0.57
SHANK1-201ENST00000293441 TTC30BQ8N4P2 665 aa18.59■□□□□ 0.57
SHANK1-201ENST00000293441 PDZD8Q8NEN9 1154 aa18.59■□□□□ 0.57
SHANK1-201ENST00000293441 TOPORSQ9NS56 1045 aaPredicted RBP18.59■□□□□ 0.57
SHANK1-201ENST00000293441 CHRNA5P30532 468 aa18.59■□□□□ 0.57
SHANK1-201ENST00000293441 RNF219Q5W0B1 726 aaPredicted RBP18.59■□□□□ 0.57
SHANK1-201ENST00000293441 SPOPLQ6IQ16 392 aa18.59■□□□□ 0.57
SHANK1-201ENST00000293441 MCPH1Q8NEM0 835 aa18.59■□□□□ 0.57
SHANK1-201ENST00000293441 VCX3AQ9NNX9 186 aa18.59■□□□□ 0.57
SHANK1-201ENST00000293441 FCER1AP12319 257 aa18.59■□□□□ 0.57
SHANK1-201ENST00000293441 COG7P83436 770 aa18.59■□□□□ 0.57
SHANK1-201ENST00000293441 ENAHQ8N8S7 591 aaPredicted RBP18.59■□□□□ 0.57
SHANK1-201ENST00000293441 BCAS4Q8TDM0 211 aa18.59■□□□□ 0.57
SHANK1-201ENST00000293441 TOM1L1O75674 476 aa18.59■□□□□ 0.57
SHANK1-201ENST00000293441 HOXD10P28358 340 aa18.59■□□□□ 0.57
SHANK1-201ENST00000293441 PCGF5Q86SE9 256 aa18.59■□□□□ 0.57
SHANK1-201ENST00000293441 CDC26Q8NHZ8 85 aa18.59■□□□□ 0.57
SHANK1-201ENST00000293441 HAUS8Q9BT25 410 aa18.59■□□□□ 0.57
SHANK1-201ENST00000293441 PPP6R3Q5H9R7 873 aaPredicted RBP18.59■□□□□ 0.57
SHANK1-201ENST00000293441 RESP18Q5W5W9 173 aa18.59■□□□□ 0.57
SHANK1-201ENST00000293441 SPATA33Q96N06 139 aa18.59■□□□□ 0.57
SHANK1-201ENST00000293441 TBC1D22BQ9NU19 505 aa18.59■□□□□ 0.57
SHANK1-201ENST00000293441 GABBR1Q9UBS5 961 aa18.59■□□□□ 0.57
SHANK1-201ENST00000293441 TTC4O95801 387 aa18.58■□□□□ 0.57
SHANK1-201ENST00000293441 TRIM68Q6AZZ1 485 aa18.58■□□□□ 0.57
SHANK1-201ENST00000293441 UNC13DQ70J99 1090 aa18.58■□□□□ 0.57
SHANK1-201ENST00000293441 SLCO1A2P46721 670 aa18.58■□□□□ 0.57
SHANK1-201ENST00000293441 PHLDB3Q6NSJ2 640 aa18.58■□□□□ 0.57
SHANK1-201ENST00000293441 SMIM5Q71RC9 77 aa18.58■□□□□ 0.57
SHANK1-201ENST00000293441 HUS1O60921 280 aa18.58■□□□□ 0.56
SHANK1-201ENST00000293441 TSPY1Q01534 308 aa18.58■□□□□ 0.56
SHANK1-201ENST00000293441 ZKSCAN8Q15776 578 aaPredicted RBP18.58■□□□□ 0.56
SHANK1-201ENST00000293441 MFSD14CQ5VZR4 134 aa18.58■□□□□ 0.56
SHANK1-201ENST00000293441 PLEKHG2Q9H7P9 1386 aa18.58■□□□□ 0.56
SHANK1-201ENST00000293441 E9PMD0 336 aa18.58■□□□□ 0.56
SHANK1-201ENST00000293441 MT-ND3P03897 115 aa18.58■□□□□ 0.56
SHANK1-201ENST00000293441 LRRC43Q8N309 656 aa18.58■□□□□ 0.56
SHANK1-201ENST00000293441 CDHR2Q9BYE9 1310 aa18.58■□□□□ 0.56
SHANK1-201ENST00000293441 KRT31Q15323 416 aa18.58■□□□□ 0.56
SHANK1-201ENST00000293441 TEX2Q8IWB9 1127 aa18.58■□□□□ 0.56
SHANK1-201ENST00000293441 BEST2Q8NFU1 509 aa18.58■□□□□ 0.56
SHANK1-201ENST00000293441 CCHCR1Q8TD31 782 aa18.58■□□□□ 0.56
SHANK1-201ENST00000293441 DNAJC12Q9UKB3 198 aa18.58■□□□□ 0.56
SHANK1-201ENST00000293441 GOLGA8QA0A0J9YX86 632 aa18.57■□□□□ 0.56
SHANK1-201ENST00000293441 GOLGA8OA6NCC3 632 aa18.57■□□□□ 0.56
SHANK1-201ENST00000293441 GOLGA8NF8WBI6 632 aa18.57■□□□□ 0.56
SHANK1-201ENST00000293441 CYP27A1Q02318 531 aa18.57■□□□□ 0.56
SHANK1-201ENST00000293441 RAD54LQ92698 747 aa18.57■□□□□ 0.56
SHANK1-201ENST00000293441 EXT2Q93063 718 aa18.57■□□□□ 0.56
SHANK1-201ENST00000293441 BBS9Q3SYG4 887 aa18.57■□□□□ 0.56
SHANK1-201ENST00000293441 SPDL1Q96EA4 605 aa18.57■□□□□ 0.56
SHANK1-201ENST00000293441 RPAP3Q9H6T3 665 aaPredicted RBP18.57■□□□□ 0.56
SHANK1-201ENST00000293441 NDUFA10O95299 355 aa18.57■□□□□ 0.56
SHANK1-201ENST00000293441 SEC31AO94979 1220 aaKnown RBP18.57■□□□□ 0.56
SHANK1-201ENST00000293441 CASP1P29466 404 aa18.57■□□□□ 0.56
SHANK1-201ENST00000293441 APBA1Q02410 837 aa18.57■□□□□ 0.56
SHANK1-201ENST00000293441 ZSCAN26Q16670 478 aa18.57■□□□□ 0.56
SHANK1-201ENST00000293441 SMAP1Q8IYB5 467 aaPredicted RBP18.57■□□□□ 0.56
SHANK1-201ENST00000293441 DNAJC17Q9NVM6 304 aaKnown RBP18.57■□□□□ 0.56
SHANK1-201ENST00000293441 POTEB3A0JP26 581 aa18.57■□□□□ 0.56
SHANK1-201ENST00000293441 POTECB2RU33 542 aa18.57■□□□□ 0.56
SHANK1-201ENST00000293441 F5H6K3 240 aa18.57■□□□□ 0.56
SHANK1-201ENST00000293441 OPHN1O60890 802 aa18.57■□□□□ 0.56
SHANK1-201ENST00000293441 STAT3P40763 770 aa18.57■□□□□ 0.56
SHANK1-201ENST00000293441 GCLMP48507 274 aa18.57■□□□□ 0.56
SHANK1-201ENST00000293441 KLRC3Q07444 240 aa18.57■□□□□ 0.56
SHANK1-201ENST00000293441 POTEBQ6S5H4 581 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms