RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 RUSC1Q9BVN2 902 aa27.44■■□□□ 1.98
ROM1-201ENST00000278833 ZHX3Q9H4I2 956 aa27.44■■□□□ 1.98
ROM1-201ENST00000278833 ARHGEF10LQ9HCE6 1279 aa27.44■■□□□ 1.98
ROM1-201ENST00000278833 INTUQ9ULD6 942 aa27.44■■□□□ 1.98
ROM1-201ENST00000278833 FRMPD4Q14CM0 1322 aa27.44■■□□□ 1.98
ROM1-201ENST00000278833 A0A0U1RQG5 324 aaPredicted RBP27.44■■□□□ 1.98
ROM1-201ENST00000278833 A0A1W2PRG0 241 aa27.44■■□□□ 1.98
ROM1-201ENST00000278833 MEIS1O00470 390 aa27.44■■□□□ 1.98
ROM1-201ENST00000278833 BUB1O43683 1085 aa27.44■■□□□ 1.98
ROM1-201ENST00000278833 PSMD10O75832 226 aa27.44■■□□□ 1.98
ROM1-201ENST00000278833 STAT2P52630 851 aa27.44■■□□□ 1.98
ROM1-201ENST00000278833 RAD51AP2Q09MP3 1159 aa27.44■■□□□ 1.98
ROM1-201ENST00000278833 RINT1Q6NUQ1 792 aa27.44■■□□□ 1.98
ROM1-201ENST00000278833 C8orf74Q6P047 294 aa27.44■■□□□ 1.98
ROM1-201ENST00000278833 GBP6Q6ZN66 633 aa27.44■■□□□ 1.98
ROM1-201ENST00000278833 ANKRD13CQ8N6S4 541 aa27.44■■□□□ 1.98
ROM1-201ENST00000278833 AFAP1L1Q8TED9 768 aa27.44■■□□□ 1.98
ROM1-201ENST00000278833 JDP2Q8WYK2 163 aa27.44■■□□□ 1.98
ROM1-201ENST00000278833 BHMT2Q9H2M3 363 aa27.44■■□□□ 1.98
ROM1-201ENST00000278833 FAM204AQ9H8W3 233 aa27.44■■□□□ 1.98
ROM1-201ENST00000278833 AKAP3O75969 853 aa27.43■■□□□ 1.98
ROM1-201ENST00000278833 IKQ13123 557 aaPredicted RBP27.43■■□□□ 1.98
ROM1-201ENST00000278833 LEKR1Q6ZMV7 388 aa27.43■■□□□ 1.98
ROM1-201ENST00000278833 OTOP1Q7RTM1 612 aa27.43■■□□□ 1.98
ROM1-201ENST00000278833 SLC35C1Q96A29 364 aa27.43■■□□□ 1.98
ROM1-201ENST00000278833 SH3GL2Q99962 352 aa27.43■■□□□ 1.98
ROM1-201ENST00000278833 DEFB129Q9H1M3 183 aa27.43■■□□□ 1.98
ROM1-201ENST00000278833 RANBP17Q9H2T7 1088 aaKnown RBP27.43■■□□□ 1.98
ROM1-201ENST00000278833 EHMT1Q9H9B1 1298 aa27.43■■□□□ 1.98
ROM1-201ENST00000278833 SIX2Q9NPC8 291 aa27.43■■□□□ 1.98
ROM1-201ENST00000278833 GDF3Q9NR23 364 aa27.43■■□□□ 1.98
ROM1-201ENST00000278833 TMX2Q9Y320 296 aa27.43■■□□□ 1.98
ROM1-201ENST00000278833 ZMYM2Q9UBW7 1377 aa27.43■■□□□ 1.98
ROM1-201ENST00000278833 A0A0A6YYK5 440 aaPredicted RBP27.42■■□□□ 1.98
ROM1-201ENST00000278833 EML1O00423 815 aa27.42■■□□□ 1.98
ROM1-201ENST00000278833 ZNF131P52739 623 aa27.42■■□□□ 1.98
ROM1-201ENST00000278833 RRP1BQ14684 758 aaKnown RBP27.42■■□□□ 1.98
ROM1-201ENST00000278833 KIAA0753Q2KHM9 967 aa27.42■■□□□ 1.98
ROM1-201ENST00000278833 TDRD3Q9H7E2 651 aaKnown RBP27.42■■□□□ 1.98
ROM1-201ENST00000278833 RBM12Q9NTZ6 932 aaKnown RBP27.42■■□□□ 1.98
ROM1-201ENST00000278833 ZMYND10O75800 440 aa27.42■■□□□ 1.98
ROM1-201ENST00000278833 SNAP25P60880 206 aa27.42■■□□□ 1.98
ROM1-201ENST00000278833 C1orf186Q6ZWK4 172 aa27.42■■□□□ 1.98
ROM1-201ENST00000278833 GOLGA6L1Q8N7Z2 621 aa27.42■■□□□ 1.98
ROM1-201ENST00000278833 EIF1ADQ8N9N8 165 aaKnown RBP27.42■■□□□ 1.98
ROM1-201ENST00000278833 HDAC7Q8WUI4 952 aa27.42■■□□□ 1.98
ROM1-201ENST00000278833 ADAMTS1Q9UHI8 967 aa27.42■■□□□ 1.98
ROM1-201ENST00000278833 GOLGA6BA6NDN3 693 aa27.41■■□□□ 1.98
ROM1-201ENST00000278833 SLC9A1P19634 815 aa27.41■■□□□ 1.98
ROM1-201ENST00000278833 ZNF76P36508 570 aa27.41■■□□□ 1.98
ROM1-201ENST00000278833 PTK2Q05397 1052 aa27.41■■□□□ 1.98
ROM1-201ENST00000278833 ALS2CLQ60I27 953 aa27.41■■□□□ 1.98
ROM1-201ENST00000278833 NIM1KQ8IY84 436 aa27.41■■□□□ 1.98
ROM1-201ENST00000278833 GSPT2Q8IYD1 628 aaKnown RBP27.41■■□□□ 1.98
ROM1-201ENST00000278833 SPAG5Q96R06 1193 aa27.41■■□□□ 1.98
ROM1-201ENST00000278833 CSRNP1Q96S65 589 aa27.41■■□□□ 1.98
ROM1-201ENST00000278833 WDR18Q9BV38 432 aa27.41■■□□□ 1.98
ROM1-201ENST00000278833 GOPCQ9HD26 462 aa27.41■■□□□ 1.98
ROM1-201ENST00000278833 TGFB1I1O43294 461 aa27.4■■□□□ 1.98
ROM1-201ENST00000278833 CAPN2P17655 700 aa27.4■■□□□ 1.98
ROM1-201ENST00000278833 APBA1Q02410 837 aa27.4■■□□□ 1.98
ROM1-201ENST00000278833 ZNF571Q7Z3V5 609 aaPredicted RBP27.4■■□□□ 1.98
ROM1-201ENST00000278833 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP27.4■■□□□ 1.98
ROM1-201ENST00000278833 UIMC1Q96RL1 719 aa27.4■■□□□ 1.98
ROM1-201ENST00000278833 TMEM59LQ9UK28 342 aa27.4■■□□□ 1.98
ROM1-201ENST00000278833 ODF2LQ9ULJ1 636 aa27.4■■□□□ 1.98
ROM1-201ENST00000278833 RSPH10B2B2RC85 870 aa27.4■■□□□ 1.98
ROM1-201ENST00000278833 RSPH10BP0C881 870 aa27.4■■□□□ 1.98
ROM1-201ENST00000278833 CXCR5P32302 372 aa27.4■■□□□ 1.98
ROM1-201ENST00000278833 GGCXP38435 758 aa27.4■■□□□ 1.98
ROM1-201ENST00000278833 B3GNT9Q6UX72 402 aa27.4■■□□□ 1.98
ROM1-201ENST00000278833 FMNL3Q8IVF7 1028 aa27.4■■□□□ 1.98
ROM1-201ENST00000278833 IFT20Q8IY31 132 aa27.4■■□□□ 1.98
ROM1-201ENST00000278833 FZD9O00144 591 aa27.39■■□□□ 1.98
ROM1-201ENST00000278833 TULP2O00295 520 aa27.39■■□□□ 1.98
ROM1-201ENST00000278833 SHOX2O60902 331 aaPredicted RBP27.39■■□□□ 1.98
ROM1-201ENST00000278833 FLOT1O75955 427 aa27.39■■□□□ 1.98
ROM1-201ENST00000278833 GCNT3O95395 438 aa27.39■■□□□ 1.98
ROM1-201ENST00000278833 HOXA13P31271 388 aaPredicted RBP27.39■■□□□ 1.98
ROM1-201ENST00000278833 NAP1L1P55209 391 aaKnown RBP27.39■■□□□ 1.98
ROM1-201ENST00000278833 SETQ01105 290 aaPredicted RBP27.39■■□□□ 1.98
ROM1-201ENST00000278833 SND1Q7KZF4 910 aaKnown RBP eCLIP27.39■■□□□ 1.98
ROM1-201ENST00000278833 MREGQ8N565 214 aa27.39■■□□□ 1.98
ROM1-201ENST00000278833 PBKQ96KB5 322 aa27.39■■□□□ 1.98
ROM1-201ENST00000278833 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP27.39■■□□□ 1.98
ROM1-201ENST00000278833 WDR11Q9BZH6 1224 aa27.39■■□□□ 1.98
ROM1-201ENST00000278833 NAGPAQ9UK23 515 aa27.39■■□□□ 1.98
ROM1-201ENST00000278833 GOLGA8KD6RF30 607 aa27.38■■□□□ 1.97
ROM1-201ENST00000278833 GCOM1H8Y6P7 765 aaPredicted RBP27.38■■□□□ 1.97
ROM1-201ENST00000278833 SLITRK3O94933 977 aa27.38■■□□□ 1.97
ROM1-201ENST00000278833 POLR2MP0CAP2 368 aa27.38■■□□□ 1.97
ROM1-201ENST00000278833 ACTN1P12814 892 aa27.38■■□□□ 1.97
ROM1-201ENST00000278833 NPEPPSP55786 919 aa27.38■■□□□ 1.97
ROM1-201ENST00000278833 CYP4A11Q02928 519 aa27.38■■□□□ 1.97
ROM1-201ENST00000278833 LRCH2Q5VUJ6 765 aa27.38■■□□□ 1.97
ROM1-201ENST00000278833 STXBP4Q6ZWJ1 553 aa27.38■■□□□ 1.97
ROM1-201ENST00000278833 LRRC57Q8N9N7 239 aa27.38■■□□□ 1.97
ROM1-201ENST00000278833 CYP2W1Q8TAV3 490 aa27.38■■□□□ 1.97
ROM1-201ENST00000278833 NEK9Q8TD19 979 aa27.38■■□□□ 1.97
ROM1-201ENST00000278833 PRMT6Q96LA8 375 aaPredicted RBP27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms