RNA–Protein interactions for RNA: ENST00000261980.2

VSX2-201, Transcript of visual system homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX2, Length 2,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2-201ENST00000261980 PLCG2P16885 1265 aa17.91■□□□□ 0.46
VSX2-201ENST00000261980 CWF19L1Q69YN2 538 aaKnown RBP17.91■□□□□ 0.46
VSX2-201ENST00000261980 RPUSD2Q8IZ73 545 aaKnown RBP17.91■□□□□ 0.46
VSX2-201ENST00000261980 TTC8Q8TAM2 541 aa17.91■□□□□ 0.46
VSX2-201ENST00000261980 EPB41L4BQ9H329 900 aa17.91■□□□□ 0.46
VSX2-201ENST00000261980 SSU72P8A0A1W2PR75 194 aa17.9■□□□□ 0.46
VSX2-201ENST00000261980 A6NHS1 94 aa17.9■□□□□ 0.46
VSX2-201ENST00000261980 POTEMA6NI47 508 aa17.9■□□□□ 0.46
VSX2-201ENST00000261980 ASAP2O43150 1006 aa17.9■□□□□ 0.46
VSX2-201ENST00000261980 ENTPD5O75356 428 aa17.9■□□□□ 0.46
VSX2-201ENST00000261980 SLC9A1P19634 815 aa17.9■□□□□ 0.46
VSX2-201ENST00000261980 ARL6IP4Q66PJ3 421 aaKnown RBP17.9■□□□□ 0.46
VSX2-201ENST00000261980 HOMER3Q9NSC5 361 aa17.9■□□□□ 0.46
VSX2-201ENST00000261980 SIPA1L3O60292 1781 aaPredicted RBP17.9■□□□□ 0.46
VSX2-201ENST00000261980 GSTA1P08263 222 aa17.9■□□□□ 0.46
VSX2-201ENST00000261980 MMP13P45452 471 aa17.9■□□□□ 0.46
VSX2-201ENST00000261980 ITIH4Q14624 930 aa17.9■□□□□ 0.46
VSX2-201ENST00000261980 CENPPQ6IPU0 288 aa17.9■□□□□ 0.46
VSX2-201ENST00000261980 ALKBH5Q6P6C2 394 aaKnown RBP17.9■□□□□ 0.46
VSX2-201ENST00000261980 ATP8B4Q8TF62 1192 aa17.9■□□□□ 0.46
VSX2-201ENST00000261980 EZH1Q92800 747 aaPredicted RBP17.9■□□□□ 0.46
VSX2-201ENST00000261980 HAO1Q9UJM8 370 aa17.9■□□□□ 0.46
VSX2-201ENST00000261980 TSPY2A6NKD2 308 aa17.89■□□□□ 0.45
VSX2-201ENST00000261980 TMEM110-MUSTN1A8MSY1 372 aa17.89■□□□□ 0.45
VSX2-201ENST00000261980 RTN3O95197 1032 aaPredicted RBP17.89■□□□□ 0.45
VSX2-201ENST00000261980 GM2AP17900 193 aa17.89■□□□□ 0.45
VSX2-201ENST00000261980 ADAM9Q13443 819 aa17.89■□□□□ 0.45
VSX2-201ENST00000261980 PFKFB3Q16875 520 aaPredicted RBP17.89■□□□□ 0.45
VSX2-201ENST00000261980 C18orf8Q96DM3 657 aa17.89■□□□□ 0.45
VSX2-201ENST00000261980 CDK5RAP3Q96JB5 506 aa17.89■□□□□ 0.45
VSX2-201ENST00000261980 TRIM4Q9C037 500 aa17.89■□□□□ 0.45
VSX2-201ENST00000261980 TMOD3Q9NYL9 352 aa17.89■□□□□ 0.45
VSX2-201ENST00000261980 FESP07332 822 aa17.89■□□□□ 0.45
VSX2-201ENST00000261980 DR1Q01658 176 aa17.89■□□□□ 0.45
VSX2-201ENST00000261980 ZC3H12AQ5D1E8 599 aaKnown RBP17.89■□□□□ 0.45
VSX2-201ENST00000261980 TCERG1LQ5VWI1 586 aa17.89■□□□□ 0.45
VSX2-201ENST00000261980 SH3RF3Q8TEJ3 882 aaPredicted RBP17.89■□□□□ 0.45
VSX2-201ENST00000261980 CNKSR1Q969H4 720 aa17.89■□□□□ 0.45
VSX2-201ENST00000261980 UTP4Q969X6 686 aaKnown RBP17.89■□□□□ 0.45
VSX2-201ENST00000261980 DDX50Q9BQ39 737 aaKnown RBP17.89■□□□□ 0.45
VSX2-201ENST00000261980 NUDT12Q9BQG2 462 aa17.89■□□□□ 0.45
VSX2-201ENST00000261980 NSRP1Q9H0G5 558 aaKnown RBP17.89■□□□□ 0.45
VSX2-201ENST00000261980 GOLGA6L10A0A0M3HER8 536 aa17.88■□□□□ 0.45
VSX2-201ENST00000261980 TMEM120BA0PK00 339 aa17.88■□□□□ 0.45
VSX2-201ENST00000261980 PDE6CP51160 858 aa17.88■□□□□ 0.45
VSX2-201ENST00000261980 SCNN1BP51168 640 aa17.88■□□□□ 0.45
VSX2-201ENST00000261980 VGLL2Q8N8G2 317 aa17.88■□□□□ 0.45
VSX2-201ENST00000261980 FBF1Q8TES7 1133 aa17.88■□□□□ 0.45
VSX2-201ENST00000261980 U2AF1L4Q8WU68 220 aaKnown RBP17.88■□□□□ 0.45
VSX2-201ENST00000261980 NUDCD1Q96RS6 583 aa17.88■□□□□ 0.45
VSX2-201ENST00000261980 PCDHA6Q9UN73 950 aa17.88■□□□□ 0.45
VSX2-201ENST00000261980 PCDHA8Q9Y5H6 950 aa17.88■□□□□ 0.45
VSX2-201ENST00000261980 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.88■□□□□ 0.45
VSX2-201ENST00000261980 hCG_2014768A0A024R1R8 64 aa17.88■□□□□ 0.45
VSX2-201ENST00000261980 MAGEB6P1A0A0J9YX57 407 aa17.88■□□□□ 0.45
VSX2-201ENST00000261980 ERVV-2B6SEH9 535 aa17.88■□□□□ 0.45
VSX2-201ENST00000261980 SUN1O94901 812 aa17.88■□□□□ 0.45
VSX2-201ENST00000261980 LRRC55Q6ZSA7 311 aa17.88■□□□□ 0.45
VSX2-201ENST00000261980 RFX8Q6ZV50 586 aa17.88■□□□□ 0.45
VSX2-201ENST00000261980 VSIG1Q86XK7 387 aa17.88■□□□□ 0.45
VSX2-201ENST00000261980 PBKQ96KB5 322 aa17.88■□□□□ 0.45
VSX2-201ENST00000261980 RAB17Q9H0T7 212 aa17.88■□□□□ 0.45
VSX2-201ENST00000261980 INTUQ9ULD6 942 aa17.88■□□□□ 0.45
VSX2-201ENST00000261980 BCS1LQ9Y276 419 aa17.88■□□□□ 0.45
VSX2-201ENST00000261980 SUGT1Q9Y2Z0 365 aa17.88■□□□□ 0.45
VSX2-201ENST00000261980 DAAM1Q9Y4D1 1078 aa17.88■□□□□ 0.45
VSX2-201ENST00000261980 PKD1L3Q7Z443 1732 aa17.88■□□□□ 0.45
VSX2-201ENST00000261980 AHCYL1O43865 530 aa17.88■□□□□ 0.45
VSX2-201ENST00000261980 PUM3Q15397 648 aaKnown RBP17.88■□□□□ 0.45
VSX2-201ENST00000261980 CNGA2Q16280 664 aa17.88■□□□□ 0.45
VSX2-201ENST00000261980 GIGYF2Q6Y7W6 1299 aaKnown RBP17.88■□□□□ 0.45
VSX2-201ENST00000261980 SV2BQ7L1I2 683 aa17.88■□□□□ 0.45
VSX2-201ENST00000261980 OCEL1Q9H607 264 aa17.88■□□□□ 0.45
VSX2-201ENST00000261980 CEP72Q9P209 647 aa17.88■□□□□ 0.45
VSX2-201ENST00000261980 FLT1P17948 1338 aa17.87■□□□□ 0.45
VSX2-201ENST00000261980 NPHP3-ACAD11A0A0J9YXS1 232 aa17.87■□□□□ 0.45
VSX2-201ENST00000261980 UQCRFS1P1P0C7P4 283 aa17.87■□□□□ 0.45
VSX2-201ENST00000261980 TRAPPC10P48553 1259 aa17.87■□□□□ 0.45
VSX2-201ENST00000261980 CTSWP56202 376 aa17.87■□□□□ 0.45
VSX2-201ENST00000261980 MGAT5Q09328 741 aa17.87■□□□□ 0.45
VSX2-201ENST00000261980 IFI16Q16666 785 aaKnown RBP17.87■□□□□ 0.45
VSX2-201ENST00000261980 DCAF17Q5H9S7 520 aaPredicted RBP17.87■□□□□ 0.45
VSX2-201ENST00000261980 BARGINQ6ZT62 677 aa17.87■□□□□ 0.45
VSX2-201ENST00000261980 KCNK18Q7Z418 384 aa17.87■□□□□ 0.45
VSX2-201ENST00000261980 BIN2Q9UBW5 565 aaPredicted RBP17.87■□□□□ 0.45
VSX2-201ENST00000261980 PCDHA4Q9UN74 947 aa17.87■□□□□ 0.45
VSX2-201ENST00000261980 ADAMTS7Q9UKP4 1686 aa17.87■□□□□ 0.45
VSX2-201ENST00000261980 CCDC169A6NNP5 214 aa17.87■□□□□ 0.45
VSX2-201ENST00000261980 RASGRF2O14827 1237 aa17.87■□□□□ 0.45
VSX2-201ENST00000261980 KCNJ1P48048 391 aa17.87■□□□□ 0.45
VSX2-201ENST00000261980 BNIP1Q12981 228 aa17.87■□□□□ 0.45
VSX2-201ENST00000261980 MUM1Q2TAK8 710 aa17.87■□□□□ 0.45
VSX2-201ENST00000261980 ZBTB38Q8NAP3 1195 aaPredicted RBP17.87■□□□□ 0.45
VSX2-201ENST00000261980 PIGBQ92521 554 aa17.87■□□□□ 0.45
VSX2-201ENST00000261980 CRAMP1Q96RY5 1269 aa17.87■□□□□ 0.45
VSX2-201ENST00000261980 PABPC3Q9H361 631 aaKnown RBP17.87■□□□□ 0.45
VSX2-201ENST00000261980 LUC7L3O95232 432 aaKnown RBP17.86■□□□□ 0.45
VSX2-201ENST00000261980 ALADP13716 330 aa17.86■□□□□ 0.45
VSX2-201ENST00000261980 FERP16591 822 aa17.86■□□□□ 0.45
VSX2-201ENST00000261980 SPATA21Q7Z572 469 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms