RNA–Protein interactions for RNA: ENSMUST00000139443.7

Hmgb1-208, Transcript of High mobility group protein B1, mousemouse

TSL 2 BASIC

Gene Hmgb1, Length 923 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-208ENSMUST00000139443 Tbc1d15Q9CXF4 671 aa17.26■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Rnf186Q9D241 226 aa17.26■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Cabp5Q9JLK3 173 aa17.26■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Extl3Q9WVL6 918 aa17.26■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Xpnpep3B7ZMP1 506 aaKnown RBP17.25■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Slc39a2G3X943 309 aa17.25■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Clk2O35491 499 aa17.25■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Axin2O88566 840 aa17.25■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Scp2P32020 547 aaKnown RBP17.25■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 P4ha1Q60715 534 aa17.25■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Ntan1Q64311 310 aa17.25■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 PtprcapQ64697 197 aa17.25■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Slc2a12Q8BFW9 622 aa17.25■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Ppme1Q8BVQ5 386 aa17.25■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Ces4aQ8R0W5 563 aa17.25■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Ppp1r16bQ8VHQ3 568 aa17.25■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Dnajc19Q9CQV7 116 aa17.25■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Ly6kQ9CWP4 154 aa17.25■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Nr1h3Q9Z0Y9 445 aa17.25■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Gm11985A0A1B0GS61 206 aa17.24■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Tbc1d2B1AVH7 922 aa17.24■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Casp14O89094 257 aa17.24■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Il4rP16382 810 aa17.24■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 IppP28575 584 aa17.24■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Tarbp2P97473 365 aa17.24■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Rufy4Q3TYX8 563 aa17.24■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Mettl14Q3UIK4 456 aa17.24■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Celf6Q7TN33 460 aaKnown RBP17.24■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Zfp120Q8BZW4 436 aa17.24■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Lmbrd1Q8K0B2 537 aa17.24■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Tcf25Q8R3L2 676 aaKnown RBP17.24■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Ifih1Q8R5F7 1025 aa17.24■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Fam209A2APA5 170 aa17.23■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Slc16a6B1AT66 607 aa17.23■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Rabep1O35551 862 aa17.23■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Pde6bP23440 856 aa17.23■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Resp18P47939 175 aa17.23■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Ano7Q14AT5 859 aa17.23■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Grxcr1Q50H32 290 aa17.23■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Kcnj11Q61743 390 aa17.23■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Wnt8aQ64527 354 aa17.23■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Acot5Q6Q2Z6 421 aa17.23■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 PodnQ7TQ62 611 aa17.23■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Gprc5aQ8BHL4 356 aa17.23■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Slc15a5Q8CBB2 566 aa17.23■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Ago3Q8CJF9 860 aa17.23■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Nod2Q8K3Z0 1020 aa17.23■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Q922R1 422 aa17.23■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Adam33Q923W9 797 aa17.23■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 YwhabQ9CQV8 246 aaKnown RBP17.23■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Rab27aQ9ERI2 221 aa17.23■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Nap1l5Q9JJF0 156 aa17.23■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Rfc2Q9WUK4 349 aaKnown RBP17.23■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Dcpp3L7N259 170 aa17.22■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 U2af2P26369 475 aaKnown RBP17.22■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Bmpr1aP36895 532 aa17.22■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 TdgP56581 421 aa17.22■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Cdca2Q14B71 982 aaKnown RBP17.22■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Ogfod1Q3U0K8 545 aa17.22■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Mfhas1Q3V1N1 1048 aa17.22■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Spdye4aQ5IBH6 268 aa17.22■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Raver2Q7TPD6 673 aa17.22■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Smarcal1Q8BJL0 910 aa17.22■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Larp6Q8BN59 492 aa17.22■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Tmem206Q9D771 350 aa17.22■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 GdaQ9R111 454 aa17.22■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Sept3Q9Z1S5 350 aa17.22■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Htatip2Q9Z2G9 242 aa17.22■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 GclmO09172 274 aaKnown RBP17.21■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Cd70O55237 195 aa17.21■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Smpd2O70572 419 aa17.21■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 MafP54843 370 aa17.21■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Snx27Q3UHD6 539 aa17.21■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Mier3Q3UHF3 551 aa17.21■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Uimc1Q5U5Q9 727 aa17.21■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Vps72Q62481 368 aa17.21■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Kiaa1841Q68FF0 718 aa17.21■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Fut11Q8BHC9 489 aa17.21■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Ipo5Q8BKC5 1097 aaKnown RBP17.21■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Serpina3bQ8BYY9 420 aa17.21■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Stoml1Q8CI66 399 aa17.21■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Colgalt1Q8K297 617 aa17.21■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Add3Q9QYB5 706 aaKnown RBP17.21■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 TriobpQ99KW3 2014 aa17.21■□□□□ 0.35
Hmgb1-208ENSMUST00000139443 Ktn1Q61595 1327 aaKnown RBP17.21■□□□□ 0.34
Hmgb1-208ENSMUST00000139443 Gucy2dA0A0U1RPR8 1117 aa17.2■□□□□ 0.34
Hmgb1-208ENSMUST00000139443 TrdnE9Q9K5 693 aa17.2■□□□□ 0.34
Hmgb1-208ENSMUST00000139443 Wnt7aP24383 349 aa17.2■□□□□ 0.34
Hmgb1-208ENSMUST00000139443 Cxcl12P40224 93 aa17.2■□□□□ 0.34
Hmgb1-208ENSMUST00000139443 Tnni3P48787 211 aa17.2■□□□□ 0.34
Hmgb1-208ENSMUST00000139443 Gbp1Q01514 589 aa17.2■□□□□ 0.34
Hmgb1-208ENSMUST00000139443 Gtf2f1Q3THK3 508 aaKnown RBP17.2■□□□□ 0.34
Hmgb1-208ENSMUST00000139443 LbpQ61805 481 aa17.2■□□□□ 0.34
Hmgb1-208ENSMUST00000139443 Olfr832Q7TRG9 312 aa17.2■□□□□ 0.34
Hmgb1-208ENSMUST00000139443 Npas4Q8BGD7 802 aa17.2■□□□□ 0.34
Hmgb1-208ENSMUST00000139443 Arhgef19Q8BWA8 802 aa17.2■□□□□ 0.34
Hmgb1-208ENSMUST00000139443 Mrgprx1Q8CIP3 322 aa17.2■□□□□ 0.34
Hmgb1-208ENSMUST00000139443 Wdr64Q9D565 1086 aa17.2■□□□□ 0.34
Hmgb1-208ENSMUST00000139443 PorcnQ9JJJ7 461 aa17.2■□□□□ 0.34
Hmgb1-208ENSMUST00000139443 Krt17Q9QWL7 433 aa17.2■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 40.6 ms