RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 FAM205CA6NFA0 338 aa19.25■□□□□ 0.67
PHGDH-234ENST00000642041 EPOPA6NHQ4 379 aa19.25■□□□□ 0.67
PHGDH-234ENST00000642041 ACTN4O43707 911 aaKnown RBP19.25■□□□□ 0.67
PHGDH-234ENST00000642041 PPP1R11O60927 126 aaPredicted RBP19.25■□□□□ 0.67
PHGDH-234ENST00000642041 SNAI1O95863 264 aaPredicted RBP19.25■□□□□ 0.67
PHGDH-234ENST00000642041 ERCC5P28715 1186 aaPredicted RBP19.25■□□□□ 0.67
PHGDH-234ENST00000642041 SREBF1P36956 1147 aa19.25■□□□□ 0.67
PHGDH-234ENST00000642041 SARSP49591 514 aaKnown RBP19.25■□□□□ 0.67
PHGDH-234ENST00000642041 IRX5P78411 483 aaPredicted RBP19.25■□□□□ 0.67
PHGDH-234ENST00000642041 SARM1Q6SZW1 724 aa19.25■□□□□ 0.67
PHGDH-234ENST00000642041 RIOX2Q8IUF8 465 aa19.25■□□□□ 0.67
PHGDH-234ENST00000642041 IGSF22Q8N9C0 903 aa19.25■□□□□ 0.67
PHGDH-234ENST00000642041 UPF3AQ9H1J1 476 aaKnown RBP19.25■□□□□ 0.67
PHGDH-234ENST00000642041 CERS4Q9HA82 394 aa19.25■□□□□ 0.67
PHGDH-234ENST00000642041 CBX8Q9HC52 389 aa19.25■□□□□ 0.67
PHGDH-234ENST00000642041 DISC1Q9NRI5 854 aa19.25■□□□□ 0.67
PHGDH-234ENST00000642041 FBXO28Q9NVF7 368 aa19.25■□□□□ 0.67
PHGDH-234ENST00000642041 DDX25Q9UHL0 483 aaKnown RBP19.25■□□□□ 0.67
PHGDH-234ENST00000642041 UMODL1Q5DID0 1318 aa19.25■□□□□ 0.67
PHGDH-234ENST00000642041 ZBBXA8MT70 800 aa19.24■□□□□ 0.67
PHGDH-234ENST00000642041 MEIS2O14770 477 aa19.24■□□□□ 0.67
PHGDH-234ENST00000642041 CA3P07451 260 aa19.24■□□□□ 0.67
PHGDH-234ENST00000642041 ALADP13716 330 aa19.24■□□□□ 0.67
PHGDH-234ENST00000642041 STAT6P42226 847 aa19.24■□□□□ 0.67
PHGDH-234ENST00000642041 GJA9P57773 515 aa19.24■□□□□ 0.67
PHGDH-234ENST00000642041 SAMD1Q6SPF0 538 aaPredicted RBP19.24■□□□□ 0.67
PHGDH-234ENST00000642041 GJD3Q8N144 294 aa19.24■□□□□ 0.67
PHGDH-234ENST00000642041 ERMNQ8TAM6 284 aa19.24■□□□□ 0.67
PHGDH-234ENST00000642041 CDK5RAP3Q96JB5 506 aa19.24■□□□□ 0.67
PHGDH-234ENST00000642041 LRWD1Q9UFC0 647 aa19.24■□□□□ 0.67
PHGDH-234ENST00000642041 SERTAD1Q9UHV2 236 aa19.24■□□□□ 0.67
PHGDH-234ENST00000642041 PCDHA12Q9UN75 941 aa19.24■□□□□ 0.67
PHGDH-234ENST00000642041 ADAMTS5Q9UNA0 930 aa19.24■□□□□ 0.67
PHGDH-234ENST00000642041 PARP14Q460N5 1801 aa19.23■□□□□ 0.67
PHGDH-234ENST00000642041 MUTP22033 750 aa19.23■□□□□ 0.67
PHGDH-234ENST00000642041 CCL23P55773 120 aa19.23■□□□□ 0.67
PHGDH-234ENST00000642041 GNASQ5JWF2 1037 aa19.23■□□□□ 0.67
PHGDH-234ENST00000642041 HAUS3Q68CZ6 603 aa19.23■□□□□ 0.67
PHGDH-234ENST00000642041 XRRA1Q6P2D8 792 aa19.23■□□□□ 0.67
PHGDH-234ENST00000642041 MAMDC4Q6UXC1 1216 aa19.23■□□□□ 0.67
PHGDH-234ENST00000642041 CABP7Q86V35 215 aa19.23■□□□□ 0.67
PHGDH-234ENST00000642041 SLC43A3Q8NBI5 491 aa19.23■□□□□ 0.67
PHGDH-234ENST00000642041 DHX58Q96C10 678 aa19.23■□□□□ 0.67
PHGDH-234ENST00000642041 PAGE5Q96GU1 130 aa19.23■□□□□ 0.67
PHGDH-234ENST00000642041 EPSTI1Q96J88 318 aa19.23■□□□□ 0.67
PHGDH-234ENST00000642041 DNAJC25Q9H1X3 360 aa19.23■□□□□ 0.67
PHGDH-234ENST00000642041 SLC38A10Q9HBR0 1119 aa19.23■□□□□ 0.67
PHGDH-234ENST00000642041 ZHX1Q9UKY1 873 aaPredicted RBP19.23■□□□□ 0.67
PHGDH-234ENST00000642041 PCDHA5Q9Y5H7 936 aa19.23■□□□□ 0.67
PHGDH-234ENST00000642041 COPB2P35606 906 aa19.22■□□□□ 0.67
PHGDH-234ENST00000642041 ARHGAP4P98171 946 aa19.22■□□□□ 0.67
PHGDH-234ENST00000642041 SETQ01105 290 aaPredicted RBP19.22■□□□□ 0.67
PHGDH-234ENST00000642041 KCNB1Q14721 858 aa19.22■□□□□ 0.67
PHGDH-234ENST00000642041 FAM178BQ8IXR5 827 aa19.22■□□□□ 0.67
PHGDH-234ENST00000642041 VWCEQ96DN2 955 aa19.22■□□□□ 0.67
PHGDH-234ENST00000642041 NOC4LQ9BVI4 516 aaKnown RBP19.22■□□□□ 0.67
PHGDH-234ENST00000642041 VWA5AO00534 786 aa19.21■□□□□ 0.67
PHGDH-234ENST00000642041 ATP2A1O14983 1001 aa19.21■□□□□ 0.67
PHGDH-234ENST00000642041 ZNF76P36508 570 aa19.21■□□□□ 0.67
PHGDH-234ENST00000642041 STAT3P40763 770 aa19.21■□□□□ 0.67
PHGDH-234ENST00000642041 STIM1Q13586 685 aa19.21■□□□□ 0.67
PHGDH-234ENST00000642041 IQCB1Q15051 598 aa19.21■□□□□ 0.67
PHGDH-234ENST00000642041 NIPA1Q7RTP0 329 aa19.21■□□□□ 0.67
PHGDH-234ENST00000642041 ARNTL2Q8WYA1 636 aa19.21■□□□□ 0.67
PHGDH-234ENST00000642041 WNT8AQ9H1J5 351 aa19.21■□□□□ 0.67
PHGDH-234ENST00000642041 BMP2KQ9NSY1 1161 aaPredicted RBP19.21■□□□□ 0.67
PHGDH-234ENST00000642041 CCPG1Q9ULG6 757 aa19.21■□□□□ 0.67
PHGDH-234ENST00000642041 COL11A1P12107 1806 aaPredicted RBP19.21■□□□□ 0.67
PHGDH-234ENST00000642041 ZNF318Q5VUA4 2279 aa19.2■□□□□ 0.66
PHGDH-234ENST00000642041 ADCY6O43306 1168 aa19.2■□□□□ 0.66
PHGDH-234ENST00000642041 CBFA2T2O43439 604 aa19.2■□□□□ 0.66
PHGDH-234ENST00000642041 PRKCSHP14314 528 aaPredicted RBP19.2■□□□□ 0.66
PHGDH-234ENST00000642041 CDC25BP30305 580 aa19.2■□□□□ 0.66
PHGDH-234ENST00000642041 TXKP42681 527 aa19.2■□□□□ 0.66
PHGDH-234ENST00000642041 NKX3-2P78367 333 aa19.2■□□□□ 0.66
PHGDH-234ENST00000642041 TAP1Q03518 808 aa19.2■□□□□ 0.66
PHGDH-234ENST00000642041 ACVR2BQ13705 512 aa19.2■□□□□ 0.66
PHGDH-234ENST00000642041 MORC3Q14149 939 aa19.2■□□□□ 0.66
PHGDH-234ENST00000642041 E2F4Q16254 413 aa19.2■□□□□ 0.66
PHGDH-234ENST00000642041 PDILTQ8N807 584 aa19.2■□□□□ 0.66
PHGDH-234ENST00000642041 CRYGNQ8WXF5 182 aa19.2■□□□□ 0.66
PHGDH-234ENST00000642041 SEZ6LQ9BYH1 1024 aa19.2■□□□□ 0.66
PHGDH-234ENST00000642041 TMEM60Q9H2L4 133 aa19.2■□□□□ 0.66
PHGDH-234ENST00000642041 TMEM260Q9NX78 707 aa19.2■□□□□ 0.66
PHGDH-234ENST00000642041 CFAP54Q96N23 3096 aa19.19■□□□□ 0.66
PHGDH-234ENST00000642041 PFKMP08237 780 aa19.19■□□□□ 0.66
PHGDH-234ENST00000642041 SNAP25P60880 206 aa19.19■□□□□ 0.66
PHGDH-234ENST00000642041 MYL5Q02045 173 aa19.19■□□□□ 0.66
PHGDH-234ENST00000642041 GRIN1Q05586 938 aa19.19■□□□□ 0.66
PHGDH-234ENST00000642041 GRB10Q13322 594 aa19.19■□□□□ 0.66
PHGDH-234ENST00000642041 PNOCQ13519 176 aa19.19■□□□□ 0.66
PHGDH-234ENST00000642041 TTLL4Q14679 1199 aa19.19■□□□□ 0.66
PHGDH-234ENST00000642041 USH1GQ495M9 461 aa19.19■□□□□ 0.66
PHGDH-234ENST00000642041 SPECC1Q5M775 1068 aa19.19■□□□□ 0.66
PHGDH-234ENST00000642041 CNNM4Q6P4Q7 775 aa19.19■□□□□ 0.66
PHGDH-234ENST00000642041 ENOX1Q8TC92 643 aaKnown RBP19.19■□□□□ 0.66
PHGDH-234ENST00000642041 TTC12Q9H892 705 aaPredicted RBP19.19■□□□□ 0.66
PHGDH-234ENST00000642041 KCNMB3Q9NPA1 279 aa19.19■□□□□ 0.66
PHGDH-234ENST00000642041 KBTBD4Q9NVX7 518 aa19.19■□□□□ 0.66
PHGDH-234ENST00000642041 USP34Q70CQ2 3546 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms