RNA–Protein interactions for RNA: ENST00000639628.1

HNRNPU-219, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 1 (best) BASIC

Gene HNRNPU, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-219ENST00000639628 MASTLQ96GX5 879 aa9.32□□□□□ -0.92
HNRNPU-219ENST00000639628 FUT8Q9BYC5 575 aa9.32□□□□□ -0.92
HNRNPU-219ENST00000639628 INTS9Q9NV88 658 aaKnown RBP9.32□□□□□ -0.92
HNRNPU-219ENST00000639628 ABCB11O95342 1321 aa9.32□□□□□ -0.92
HNRNPU-219ENST00000639628 GPR75-ASB3A0A0A6YYF3 556 aa9.32□□□□□ -0.92
HNRNPU-219ENST00000639628 MIF4GDA9UHW6 222 aaKnown RBP9.32□□□□□ -0.92
HNRNPU-219ENST00000639628 PDXKO00764 312 aa9.32□□□□□ -0.92
HNRNPU-219ENST00000639628 THAP12O43422 761 aa9.32□□□□□ -0.92
HNRNPU-219ENST00000639628 ATF2P15336 505 aa9.32□□□□□ -0.92
HNRNPU-219ENST00000639628 ANXA13P27216 316 aa9.32□□□□□ -0.92
HNRNPU-219ENST00000639628 MAGEA9P43362 315 aa9.32□□□□□ -0.92
HNRNPU-219ENST00000639628 IFT88Q13099 833 aa9.32□□□□□ -0.92
HNRNPU-219ENST00000639628 SLMAPQ14BN4 828 aa9.32□□□□□ -0.92
HNRNPU-219ENST00000639628 RSRC2Q7L4I2 434 aaKnown RBP9.32□□□□□ -0.92
HNRNPU-219ENST00000639628 VSIG1Q86XK7 387 aa9.32□□□□□ -0.92
HNRNPU-219ENST00000639628 SP8Q8IXZ3 490 aa9.32□□□□□ -0.92
HNRNPU-219ENST00000639628 SREK1Q8WXA9 508 aaKnown RBP9.32□□□□□ -0.92
HNRNPU-219ENST00000639628 P3H4Q92791 437 aa9.32□□□□□ -0.92
HNRNPU-219ENST00000639628 ATP6V0A1Q93050 837 aa9.32□□□□□ -0.92
HNRNPU-219ENST00000639628 CALR3Q96L12 384 aaKnown RBP9.32□□□□□ -0.92
HNRNPU-219ENST00000639628 LRRC1Q9BTT6 524 aa9.32□□□□□ -0.92
HNRNPU-219ENST00000639628 RAB20Q9NX57 234 aa9.32□□□□□ -0.92
HNRNPU-219ENST00000639628 PLAGL2Q9UPG8 496 aa9.32□□□□□ -0.92
HNRNPU-219ENST00000639628 PLAAQ9Y263 795 aa9.32□□□□□ -0.92
HNRNPU-219ENST00000639628 ATRNO75882 1429 aa9.32□□□□□ -0.92
HNRNPU-219ENST00000639628 HNRNPDLO14979 420 aaKnown RBP9.32□□□□□ -0.92
HNRNPU-219ENST00000639628 ZNF185O15231 689 aa9.32□□□□□ -0.92
HNRNPU-219ENST00000639628 HHATQ5VTY9 493 aa9.32□□□□□ -0.92
HNRNPU-219ENST00000639628 TTI2Q6NXR4 508 aa9.32□□□□□ -0.92
HNRNPU-219ENST00000639628 ANKRD42Q8N9B4 389 aa9.32□□□□□ -0.92
HNRNPU-219ENST00000639628 PIGOQ8TEQ8 1089 aa9.32□□□□□ -0.92
HNRNPU-219ENST00000639628 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.32□□□□□ -0.924e-7■■■■■ 58.1
HNRNPU-219ENST00000639628 PCIF1Q9H4Z3 704 aa9.32□□□□□ -0.92
HNRNPU-219ENST00000639628 AS3MTQ9HBK9 375 aa9.32□□□□□ -0.92
HNRNPU-219ENST00000639628 CLRN2A0PK11 232 aa9.31□□□□□ -0.92
HNRNPU-219ENST00000639628 SFI1A8K8P3 1242 aa9.31□□□□□ -0.92
HNRNPU-219ENST00000639628 PRELPP51888 382 aa9.31□□□□□ -0.92
HNRNPU-219ENST00000639628 YWHAEP62258 255 aaKnown RBP9.31□□□□□ -0.92
HNRNPU-219ENST00000639628 EDRF1Q3B7T1 1238 aa9.31□□□□□ -0.92
HNRNPU-219ENST00000639628 BEND6Q5SZJ8 279 aaPredicted RBP9.31□□□□□ -0.92
HNRNPU-219ENST00000639628 WDR93Q6P2C0 686 aa9.31□□□□□ -0.92
HNRNPU-219ENST00000639628 TBC1D16Q8TBP0 767 aa9.31□□□□□ -0.92
HNRNPU-219ENST00000639628 MGARPQ8TDB4 240 aa9.31□□□□□ -0.92
HNRNPU-219ENST00000639628 PSMD1Q99460 953 aa9.31□□□□□ -0.92
HNRNPU-219ENST00000639628 AZI2Q9H6S1 392 aa9.31□□□□□ -0.92
HNRNPU-219ENST00000639628 A0A1B0GUA9 196 aa9.31□□□□□ -0.92
HNRNPU-219ENST00000639628 F5H6K3 240 aa9.31□□□□□ -0.92
HNRNPU-219ENST00000639628 ECEL1O95672 775 aa9.31□□□□□ -0.92
HNRNPU-219ENST00000639628 CD19P15391 556 aa9.31□□□□□ -0.92
HNRNPU-219ENST00000639628 KCNA4P22459 653 aa9.31□□□□□ -0.92
HNRNPU-219ENST00000639628 KLRK1P26718 216 aa9.31□□□□□ -0.92
HNRNPU-219ENST00000639628 KLRC3Q07444 240 aa9.31□□□□□ -0.92
HNRNPU-219ENST00000639628 PDCLQ13371 301 aa9.31□□□□□ -0.92
HNRNPU-219ENST00000639628 CCDC93Q567U6 631 aa9.31□□□□□ -0.92
HNRNPU-219ENST00000639628 ARHGAP27Q6ZUM4 889 aa9.31□□□□□ -0.92
HNRNPU-219ENST00000639628 TRAPPC11Q7Z392 1133 aa9.31□□□□□ -0.92
HNRNPU-219ENST00000639628 CCDC197Q8NCU1 140 aa9.31□□□□□ -0.92
HNRNPU-219ENST00000639628 UHMK1Q8TAS1 419 aaKnown RBP9.31□□□□□ -0.92
HNRNPU-219ENST00000639628 SMC6Q96SB8 1091 aa9.31□□□□□ -0.92
HNRNPU-219ENST00000639628 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.31□□□□□ -0.923e-8■■■■□ 19.5
HNRNPU-219ENST00000639628 TAF1DQ9H5J8 278 aaPredicted RBP9.31□□□□□ -0.92
HNRNPU-219ENST00000639628 NOVA2Q9UNW9 492 aaKnown RBP9.31□□□□□ -0.92
HNRNPU-219ENST00000639628 XRN1Q8IZH2 1706 aaKnown RBP9.31□□□□□ -0.92
HNRNPU-219ENST00000639628 SYNGAP1Q96PV0 1343 aa9.31□□□□□ -0.92
HNRNPU-219ENST00000639628 TBX3O15119 743 aa9.31□□□□□ -0.92
HNRNPU-219ENST00000639628 STAT3P40763 770 aa9.31□□□□□ -0.92
HNRNPU-219ENST00000639628 CACNB3P54284 484 aa9.31□□□□□ -0.92
HNRNPU-219ENST00000639628 SNAP25P60880 206 aa9.31□□□□□ -0.92
HNRNPU-219ENST00000639628 UAP1Q16222 522 aaPredicted RBP9.31□□□□□ -0.92
HNRNPU-219ENST00000639628 EARS2Q5JPH6 523 aaKnown RBP9.31□□□□□ -0.92
HNRNPU-219ENST00000639628 SH3RF1Q7Z6J0 888 aa9.31□□□□□ -0.92
HNRNPU-219ENST00000639628 TSNARE1Q96NA8 513 aa9.31□□□□□ -0.92
HNRNPU-219ENST00000639628 CRAMP1Q96RY5 1269 aa9.31□□□□□ -0.92
HNRNPU-219ENST00000639628 KLHL14Q9P2G3 628 aa9.31□□□□□ -0.92
HNRNPU-219ENST00000639628 SART1O43290 800 aaKnown RBP9.3□□□□□ -0.92
HNRNPU-219ENST00000639628 MAPK4P31152 587 aa9.3□□□□□ -0.92
HNRNPU-219ENST00000639628 ABCD1P33897 745 aa9.3□□□□□ -0.92
HNRNPU-219ENST00000639628 VPS41P49754 854 aa9.3□□□□□ -0.92
HNRNPU-219ENST00000639628 MXRA7P84157 204 aa9.3□□□□□ -0.92
HNRNPU-219ENST00000639628 CDK17Q00537 523 aa9.3□□□□□ -0.92
HNRNPU-219ENST00000639628 LMNB2Q03252 620 aa9.3□□□□□ -0.92
HNRNPU-219ENST00000639628 PPP1R2P3Q6NXS1 205 aa9.3□□□□□ -0.92
HNRNPU-219ENST00000639628 SLITRK6Q9H5Y7 841 aa9.3□□□□□ -0.92
HNRNPU-219ENST00000639628 VPS37BQ9H9H4 285 aa9.3□□□□□ -0.92
HNRNPU-219ENST00000639628 KMT5AQ9NQR1 393 aa9.3□□□□□ -0.92
HNRNPU-219ENST00000639628 PTPN22Q9Y2R2 807 aa9.3□□□□□ -0.92
HNRNPU-219ENST00000639628 TNS2Q63HR2 1409 aa9.3□□□□□ -0.92
HNRNPU-219ENST00000639628 SPATA31A5Q5VU36 1347 aa9.3□□□□□ -0.92
HNRNPU-219ENST00000639628 SPATA31A7Q8IWB4 1347 aa9.3□□□□□ -0.92
HNRNPU-219ENST00000639628 ESYT3A0FGR9 886 aa9.3□□□□□ -0.92
HNRNPU-219ENST00000639628 PODXLO00592 558 aa9.3□□□□□ -0.92
HNRNPU-219ENST00000639628 CTNND1O60716 968 aaKnown RBP9.3□□□□□ -0.92
HNRNPU-219ENST00000639628 RFX1P22670 979 aa9.3□□□□□ -0.92
HNRNPU-219ENST00000639628 SGO2Q562F6 1265 aa9.3□□□□□ -0.92
HNRNPU-219ENST00000639628 TTBK2Q6IQ55 1244 aa9.3□□□□□ -0.92
HNRNPU-219ENST00000639628 PRR5LQ6MZQ0 368 aa9.3□□□□□ -0.92
HNRNPU-219ENST00000639628 MMGT1Q8N4V1 131 aa9.3□□□□□ -0.92
HNRNPU-219ENST00000639628 SYN2Q92777 582 aaPredicted RBP9.3□□□□□ -0.92
HNRNPU-219ENST00000639628 HPCAL4Q9UM19 191 aa9.3□□□□□ -0.92
HNRNPU-219ENST00000639628 TOPAZ1Q8N9V7 1692 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms