RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 FDX1P10109 184 aa21.71■■□□□ 1.07
PCDHB11-202ENST00000624887 VAV2P52735 878 aa21.71■■□□□ 1.07
PCDHB11-202ENST00000624887 ZNF131P52739 623 aa21.71■■□□□ 1.07
PCDHB11-202ENST00000624887 SPA17Q15506 151 aa21.71■■□□□ 1.07
PCDHB11-202ENST00000624887 LXNQ9BS40 222 aa21.71■■□□□ 1.07
PCDHB11-202ENST00000624887 LACRTQ9GZZ8 138 aa21.71■■□□□ 1.07
PCDHB11-202ENST00000624887 PARVGQ9HBI0 331 aa21.71■■□□□ 1.07
PCDHB11-202ENST00000624887 POLD4Q9HCU8 107 aa21.71■■□□□ 1.07
PCDHB11-202ENST00000624887 TFR2Q9UP52 801 aa21.71■■□□□ 1.07
PCDHB11-202ENST00000624887 SFI1A8K8P3 1242 aa21.7■■□□□ 1.07
PCDHB11-202ENST00000624887 ZBED4O75132 1171 aa21.7■■□□□ 1.07
PCDHB11-202ENST00000624887 LCA5LO95447 670 aa21.7■■□□□ 1.07
PCDHB11-202ENST00000624887 RPL13P26373 211 aaKnown RBP21.7■■□□□ 1.07
PCDHB11-202ENST00000624887 KCNH2Q12809 1159 aa21.7■■□□□ 1.07
PCDHB11-202ENST00000624887 TKFCQ3LXA3 575 aa21.7■■□□□ 1.07
PCDHB11-202ENST00000624887 SCYL3Q8IZE3 742 aa21.7■■□□□ 1.07
PCDHB11-202ENST00000624887 MYCT1Q8N699 235 aa21.7■■□□□ 1.07
PCDHB11-202ENST00000624887 SYN2Q92777 582 aaPredicted RBP21.7■■□□□ 1.07
PCDHB11-202ENST00000624887 GOLGA1Q92805 767 aa21.7■■□□□ 1.07
PCDHB11-202ENST00000624887 LSM14BQ9BX40 385 aaKnown RBP21.7■■□□□ 1.07
PCDHB11-202ENST00000624887 ARMCX3Q9UH62 379 aaPredicted RBP21.7■■□□□ 1.07
PCDHB11-202ENST00000624887 ODF2LQ9ULJ1 636 aa21.7■■□□□ 1.07
PCDHB11-202ENST00000624887 PARP14Q460N5 1801 aa21.7■■□□□ 1.06
PCDHB11-202ENST00000624887 NR3C1P04150 777 aa21.7■■□□□ 1.06
PCDHB11-202ENST00000624887 EIF4A3P38919 411 aaKnown RBP21.7■■□□□ 1.06
PCDHB11-202ENST00000624887 KIF11P52732 1056 aa21.7■■□□□ 1.06
PCDHB11-202ENST00000624887 AMPD2Q01433 879 aa21.7■■□□□ 1.06
PCDHB11-202ENST00000624887 CYP27A1Q02318 531 aa21.7■■□□□ 1.06
PCDHB11-202ENST00000624887 SPP2Q13103 211 aa21.7■■□□□ 1.06
PCDHB11-202ENST00000624887 UTP14CQ5TAP6 766 aaKnown RBP21.7■■□□□ 1.06
PCDHB11-202ENST00000624887 GPR161Q8N6U8 529 aaKnown RBP21.7■■□□□ 1.06
PCDHB11-202ENST00000624887 RABGGTAQ92696 567 aa21.7■■□□□ 1.06
PCDHB11-202ENST00000624887 PURBQ96QR8 312 aaKnown RBP21.7■■□□□ 1.06
PCDHB11-202ENST00000624887 TSGA10Q9BZW7 698 aa21.7■■□□□ 1.06
PCDHB11-202ENST00000624887 JADE2Q9NQC1 790 aa21.7■■□□□ 1.06
PCDHB11-202ENST00000624887 HOMER2Q9NSB8 354 aa21.7■■□□□ 1.06
PCDHB11-202ENST00000624887 SLC16A3O15427 465 aaKnown RBP21.69■■□□□ 1.06
PCDHB11-202ENST00000624887 DHX15O43143 795 aaKnown RBP21.69■■□□□ 1.06
PCDHB11-202ENST00000624887 EPS15P42566 896 aa21.69■■□□□ 1.06
PCDHB11-202ENST00000624887 BACE1P56817 501 aa21.69■■□□□ 1.06
PCDHB11-202ENST00000624887 MRPS9P82933 396 aaKnown RBP21.69■■□□□ 1.06
PCDHB11-202ENST00000624887 WHAMMP3Q1A5X7 153 aa21.69■■□□□ 1.06
PCDHB11-202ENST00000624887 AGO4Q9HCK5 861 aaKnown RBP21.69■■□□□ 1.06
PCDHB11-202ENST00000624887 CTDP1Q9Y5B0 961 aaPredicted RBP21.69■■□□□ 1.06
PCDHB11-202ENST00000624887 SSU72P8A0A1W2PR75 194 aa21.68■■□□□ 1.06
PCDHB11-202ENST00000624887 TGFB1I1O43294 461 aa21.68■■□□□ 1.06
PCDHB11-202ENST00000624887 GUCY2CP25092 1073 aa21.68■■□□□ 1.06
PCDHB11-202ENST00000624887 CHMP4BP1P59074 171 aa21.68■■□□□ 1.06
PCDHB11-202ENST00000624887 RPS6P62753 249 aaKnown RBP21.68■■□□□ 1.06
PCDHB11-202ENST00000624887 KCNA1Q09470 495 aa21.68■■□□□ 1.06
PCDHB11-202ENST00000624887 KIF5AQ12840 1032 aa21.68■■□□□ 1.06
PCDHB11-202ENST00000624887 MAPK8IP2Q13387 824 aaPredicted RBP21.68■■□□□ 1.06
PCDHB11-202ENST00000624887 TEX35Q5T0J7 233 aa21.68■■□□□ 1.06
PCDHB11-202ENST00000624887 MIER3Q7Z3K6 550 aa21.68■■□□□ 1.06
PCDHB11-202ENST00000624887 BANK1Q8NDB2 785 aa21.68■■□□□ 1.06
PCDHB11-202ENST00000624887 FIZ1Q96SL8 496 aa21.68■■□□□ 1.06
PCDHB11-202ENST00000624887 CRACR2AQ9BSW2 395 aa21.68■■□□□ 1.06
PCDHB11-202ENST00000624887 DEF6Q9H4E7 631 aa21.68■■□□□ 1.06
PCDHB11-202ENST00000624887 AS3MTQ9HBK9 375 aa21.68■■□□□ 1.06
PCDHB11-202ENST00000624887 METTL14Q9HCE5 456 aaKnown RBP21.68■■□□□ 1.06
PCDHB11-202ENST00000624887 DDX41Q9UJV9 622 aaKnown RBP21.68■■□□□ 1.06
PCDHB11-202ENST00000624887 UBE4BO95155 1302 aa21.68■■□□□ 1.06
PCDHB11-202ENST00000624887 UTRNP46939 3433 aa21.68■■□□□ 1.06
PCDHB11-202ENST00000624887 DDX39AO00148 427 aaKnown RBP21.68■■□□□ 1.06
PCDHB11-202ENST00000624887 VWA5AO00534 786 aa21.68■■□□□ 1.06
PCDHB11-202ENST00000624887 AKAP3O75969 853 aa21.68■■□□□ 1.06
PCDHB11-202ENST00000624887 P4HBP07237 508 aaKnown RBP21.68■■□□□ 1.06
PCDHB11-202ENST00000624887 NMT1P30419 496 aaKnown RBP21.68■■□□□ 1.06
PCDHB11-202ENST00000624887 ITGB3BPQ13352 177 aaPredicted RBP21.68■■□□□ 1.06
PCDHB11-202ENST00000624887 NFIL3Q16649 462 aa21.68■■□□□ 1.06
PCDHB11-202ENST00000624887 ASTE1Q2TB18 679 aaPredicted RBP21.68■■□□□ 1.06
PCDHB11-202ENST00000624887 HGSNATQ68CP4 663 aa21.68■■□□□ 1.06
PCDHB11-202ENST00000624887 APOBEC3FQ8IUX4 373 aaKnown RBP21.68■■□□□ 1.06
PCDHB11-202ENST00000624887 GPC2Q8N158 579 aa21.68■■□□□ 1.06
PCDHB11-202ENST00000624887 ZNF280CQ8ND82 737 aa21.68■■□□□ 1.06
PCDHB11-202ENST00000624887 TAAR1Q96RJ0 339 aa21.68■■□□□ 1.06
PCDHB11-202ENST00000624887 NLRC4Q9NPP4 1024 aa21.68■■□□□ 1.06
PCDHB11-202ENST00000624887 ARGLU1Q9NWB6 273 aaPredicted RBP21.68■■□□□ 1.06
PCDHB11-202ENST00000624887 MYO6Q9UM54 1294 aa21.68■■□□□ 1.06
PCDHB11-202ENST00000624887 PCDHA13Q9Y5I0 950 aa21.68■■□□□ 1.06
PCDHB11-202ENST00000624887 ZMYM2Q9UBW7 1377 aa21.68■■□□□ 1.06
PCDHB11-202ENST00000624887 AKR1B10O60218 316 aa21.67■■□□□ 1.06
PCDHB11-202ENST00000624887 PTPRAP18433 802 aa21.67■■□□□ 1.06
PCDHB11-202ENST00000624887 CLCN6P51797 869 aa21.67■■□□□ 1.06
PCDHB11-202ENST00000624887 POLR2FP61218 127 aaKnown RBP21.67■■□□□ 1.06
PCDHB11-202ENST00000624887 MTMR1Q13613 665 aa21.67■■□□□ 1.06
PCDHB11-202ENST00000624887 TRERF1Q96PN7 1200 aa21.67■■□□□ 1.06
PCDHB11-202ENST00000624887 WRNIP1Q96S55 665 aa21.67■■□□□ 1.06
PCDHB11-202ENST00000624887 IFIH1Q9BYX4 1025 aaKnown RBP21.67■■□□□ 1.06
PCDHB11-202ENST00000624887 ARHGEF35A5YM69 484 aa21.67■■□□□ 1.06
PCDHB11-202ENST00000624887 USO1O60763 962 aaKnown RBP21.67■■□□□ 1.06
PCDHB11-202ENST00000624887 AFPP02771 609 aaKnown RBP21.67■■□□□ 1.06
PCDHB11-202ENST00000624887 EPB41P11171 864 aaKnown RBP21.67■■□□□ 1.06
PCDHB11-202ENST00000624887 XRCC5P13010 732 aaKnown RBP21.67■■□□□ 1.06
PCDHB11-202ENST00000624887 TUBB4BP68371 445 aa21.67■■□□□ 1.06
PCDHB11-202ENST00000624887 PGM5Q15124 567 aa21.67■■□□□ 1.06
PCDHB11-202ENST00000624887 ANGEL2Q5VTE6 544 aaKnown RBP21.67■■□□□ 1.06
PCDHB11-202ENST00000624887 SFMBT2Q5VUG0 894 aa21.67■■□□□ 1.06
PCDHB11-202ENST00000624887 ZNF720Q7Z2F6 126 aa21.67■■□□□ 1.06
PCDHB11-202ENST00000624887 TRAPPC11Q7Z392 1133 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms