RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 ZSCAN10Q96SZ4 725 aaPredicted RBP10.61□□□□□ -0.71
TNFAIP3-210ENST00000620204 SLC5A4Q9NY91 659 aa10.61□□□□□ -0.71
TNFAIP3-210ENST00000620204 TACC3Q9Y6A5 838 aa10.61□□□□□ -0.71
TNFAIP3-210ENST00000620204 GSTTP1A0A1W2PQM5 241 aa10.61□□□□□ -0.71
TNFAIP3-210ENST00000620204 GRID2IPA4D2P6 1211 aa10.61□□□□□ -0.71
TNFAIP3-210ENST00000620204 ZNF131P52739 623 aa10.61□□□□□ -0.71
TNFAIP3-210ENST00000620204 PMS2P54278 862 aa10.61□□□□□ -0.71
TNFAIP3-210ENST00000620204 CUL3Q13618 768 aa10.61□□□□□ -0.71
TNFAIP3-210ENST00000620204 TXNRD1Q16881 649 aa10.61□□□□□ -0.71
TNFAIP3-210ENST00000620204 DCAF17Q5H9S7 520 aaPredicted RBP10.61□□□□□ -0.71
TNFAIP3-210ENST00000620204 SV2BQ7L1I2 683 aa10.61□□□□□ -0.71
TNFAIP3-210ENST00000620204 TMC3Q7Z5M5 1100 aa10.61□□□□□ -0.71
TNFAIP3-210ENST00000620204 SPATA5Q8NB90 893 aa10.61□□□□□ -0.71
TNFAIP3-210ENST00000620204 SHISA4Q96DD7 197 aa10.61□□□□□ -0.71
TNFAIP3-210ENST00000620204 QTRT2Q9H974 415 aaKnown RBP10.61□□□□□ -0.71
TNFAIP3-210ENST00000620204 METTL5Q9NRN9 209 aaKnown RBP10.61□□□□□ -0.71
TNFAIP3-210ENST00000620204 ZMYND8Q9ULU4 1186 aaPredicted RBP10.61□□□□□ -0.71
TNFAIP3-210ENST00000620204 A0A1W2PRG0 241 aa10.6□□□□□ -0.71
TNFAIP3-210ENST00000620204 GNPATO15228 680 aa10.6□□□□□ -0.71
TNFAIP3-210ENST00000620204 TNFRSF8P28908 595 aa10.6□□□□□ -0.71
TNFAIP3-210ENST00000620204 ABL2P42684 1182 aa10.6□□□□□ -0.71
TNFAIP3-210ENST00000620204 VPS41P49754 854 aa10.6□□□□□ -0.71
TNFAIP3-210ENST00000620204 KLC1Q07866 573 aa10.6□□□□□ -0.71
TNFAIP3-210ENST00000620204 NAB2Q15742 525 aa10.6□□□□□ -0.71
TNFAIP3-210ENST00000620204 PPP1R15BQ5SWA1 713 aa10.6□□□□□ -0.71
TNFAIP3-210ENST00000620204 INPP4AQ96PE3 977 aaPredicted RBP10.6□□□□□ -0.71
TNFAIP3-210ENST00000620204 SLC4A9Q96Q91 983 aa10.6□□□□□ -0.71
TNFAIP3-210ENST00000620204 ADAM33Q9BZ11 813 aa10.6□□□□□ -0.71
TNFAIP3-210ENST00000620204 RTL9Q8NET4 1388 aa10.6□□□□□ -0.71
TNFAIP3-210ENST00000620204 PRPF3O43395 683 aaKnown RBP10.6□□□□□ -0.71
TNFAIP3-210ENST00000620204 RHOBTB3O94955 611 aa10.6□□□□□ -0.71
TNFAIP3-210ENST00000620204 SERPING1P05155 500 aa10.6□□□□□ -0.71
TNFAIP3-210ENST00000620204 NBPF5PQ86XG9 351 aaPredicted RBP10.6□□□□□ -0.71
TNFAIP3-210ENST00000620204 CNBD1Q8NA66 436 aa10.6□□□□□ -0.71
TNFAIP3-210ENST00000620204 DTX3LQ8TDB6 740 aa10.6□□□□□ -0.71
TNFAIP3-210ENST00000620204 FGD4Q96M96 766 aa10.6□□□□□ -0.71
TNFAIP3-210ENST00000620204 RAB17Q9H0T7 212 aa10.6□□□□□ -0.71
TNFAIP3-210ENST00000620204 CCDC87Q9NVE4 849 aa10.6□□□□□ -0.71
TNFAIP3-210ENST00000620204 ADAM22Q9P0K1 906 aa10.6□□□□□ -0.71
TNFAIP3-210ENST00000620204 MYH6P13533 1939 aa10.6□□□□□ -0.71
TNFAIP3-210ENST00000620204 SPATA31A5Q5VU36 1347 aa10.6□□□□□ -0.71
TNFAIP3-210ENST00000620204 SPATA31A7Q8IWB4 1347 aa10.6□□□□□ -0.71
TNFAIP3-210ENST00000620204 IRS4O14654 1257 aaPredicted RBP10.6□□□□□ -0.71
TNFAIP3-210ENST00000620204 CASP7P55210 303 aa10.6□□□□□ -0.71
TNFAIP3-210ENST00000620204 RCN2Q14257 317 aa10.6□□□□□ -0.71
TNFAIP3-210ENST00000620204 LONRF1Q17RB8 773 aa10.6□□□□□ -0.71
TNFAIP3-210ENST00000620204 ALKBH5Q6P6C2 394 aaKnown RBP10.6□□□□□ -0.71
TNFAIP3-210ENST00000620204 ZNF662Q6ZS27 426 aa10.6□□□□□ -0.71
TNFAIP3-210ENST00000620204 TAOK1Q7L7X3 1001 aa10.6□□□□□ -0.71
TNFAIP3-210ENST00000620204 L3MBTL3Q96JM7 780 aaPredicted RBP10.6□□□□□ -0.71
TNFAIP3-210ENST00000620204 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.6□□□□□ -0.718e-7■■□□□ 14.5
TNFAIP3-210ENST00000620204 CDCA7Q9BWT1 371 aaPredicted RBP10.6□□□□□ -0.71
TNFAIP3-210ENST00000620204 TRIM9Q9C026 710 aa10.6□□□□□ -0.71
TNFAIP3-210ENST00000620204 CPVLQ9H3G5 476 aa10.6□□□□□ -0.71
TNFAIP3-210ENST00000620204 SEMA6BQ9H3T3 888 aa10.6□□□□□ -0.71
TNFAIP3-210ENST00000620204 TMEM165Q9HC07 324 aa10.6□□□□□ -0.71
TNFAIP3-210ENST00000620204 FAM114A2Q9NRY5 505 aa10.6□□□□□ -0.71
TNFAIP3-210ENST00000620204 MTRF1LQ9UGC7 380 aaKnown RBP10.6□□□□□ -0.71
TNFAIP3-210ENST00000620204 PCDHGC5Q9Y5F6 944 aa10.6□□□□□ -0.71
TNFAIP3-210ENST00000620204 CIAO1O76071 339 aa10.59□□□□□ -0.71
TNFAIP3-210ENST00000620204 ACTN1P12814 892 aa10.59□□□□□ -0.71
TNFAIP3-210ENST00000620204 TARSP26639 723 aaKnown RBP10.59□□□□□ -0.71
TNFAIP3-210ENST00000620204 DR1Q01658 176 aa10.59□□□□□ -0.71
TNFAIP3-210ENST00000620204 NAALADL2Q58DX5 795 aa10.59□□□□□ -0.71
TNFAIP3-210ENST00000620204 MEI1Q5TIA1 1274 aa10.59□□□□□ -0.71
TNFAIP3-210ENST00000620204 SRBD1Q8N5C6 995 aaKnown RBP10.59□□□□□ -0.71
TNFAIP3-210ENST00000620204 SEMA4AQ9H3S1 761 aa10.59□□□□□ -0.71
TNFAIP3-210ENST00000620204 SCOCQ9UIL1 159 aa10.59□□□□□ -0.71
TNFAIP3-210ENST00000620204 STX8Q9UNK0 236 aa10.59□□□□□ -0.71
TNFAIP3-210ENST00000620204 AHCYL1O43865 530 aa10.59□□□□□ -0.71
TNFAIP3-210ENST00000620204 GSTA1P08263 222 aa10.59□□□□□ -0.71
TNFAIP3-210ENST00000620204 BCAMP50895 628 aa10.59□□□□□ -0.71
TNFAIP3-210ENST00000620204 ZNF268Q14587 947 aaPredicted RBP10.59□□□□□ -0.71
TNFAIP3-210ENST00000620204 TNIP1Q15025 636 aa10.59□□□□□ -0.71
TNFAIP3-210ENST00000620204 NKX1-1Q15270 411 aaPredicted RBP10.59□□□□□ -0.71
TNFAIP3-210ENST00000620204 SEPT14Q6ZU15 432 aa10.59□□□□□ -0.71
TNFAIP3-210ENST00000620204 VPS36Q86VN1 386 aa10.59□□□□□ -0.71
TNFAIP3-210ENST00000620204 TTLL11Q8NHH1 800 aa10.59□□□□□ -0.71
TNFAIP3-210ENST00000620204 FBXO25Q8TCJ0 367 aa10.59□□□□□ -0.71
TNFAIP3-210ENST00000620204 EPAS1Q99814 870 aa10.59□□□□□ -0.71
TNFAIP3-210ENST00000620204 RGL1Q9NZL6 768 aa10.59□□□□□ -0.71
TNFAIP3-210ENST00000620204 CCNL1Q9UK58 526 aaPredicted RBP10.59□□□□□ -0.71
TNFAIP3-210ENST00000620204 H0YGN5 161 aa10.59□□□□□ -0.71
TNFAIP3-210ENST00000620204 RARAP10276 462 aa10.59□□□□□ -0.71
TNFAIP3-210ENST00000620204 CYP19A1P11511 503 aaPredicted RBP10.59□□□□□ -0.71
TNFAIP3-210ENST00000620204 SERPINB4P48594 390 aa10.59□□□□□ -0.71
TNFAIP3-210ENST00000620204 EIF3BP55884 814 aaKnown RBP10.59□□□□□ -0.71
TNFAIP3-210ENST00000620204 CWF19L1Q69YN2 538 aaKnown RBP10.59□□□□□ -0.71
TNFAIP3-210ENST00000620204 SPATA21Q7Z572 469 aa10.59□□□□□ -0.71
TNFAIP3-210ENST00000620204 APBB1IPQ7Z5R6 666 aaPredicted RBP10.59□□□□□ -0.71
TNFAIP3-210ENST00000620204 RAB3IPQ96QF0 476 aaPredicted RBP10.59□□□□□ -0.71
TNFAIP3-210ENST00000620204 TMX4Q9H1E5 349 aaPredicted RBP10.59□□□□□ -0.71
TNFAIP3-210ENST00000620204 HAO1Q9UJM8 370 aa10.59□□□□□ -0.71
TNFAIP3-210ENST00000620204 ATP6V0A2Q9Y487 856 aa10.59□□□□□ -0.71
TNFAIP3-210ENST00000620204 NFS1Q9Y697 457 aa10.59□□□□□ -0.71
TNFAIP3-210ENST00000620204 PPFIA2O75334 1257 aa10.58□□□□□ -0.72
TNFAIP3-210ENST00000620204 RTN3O95197 1032 aaPredicted RBP10.58□□□□□ -0.72
TNFAIP3-210ENST00000620204 UQCRFS1P1P0C7P4 283 aa10.58□□□□□ -0.72
TNFAIP3-210ENST00000620204 CALML3P27482 149 aa10.58□□□□□ -0.72
TNFAIP3-210ENST00000620204 TUBP50607 506 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms