RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 GIMAP6Q6P9H5 292 aa7.34□□□□□ -1.23
SCAMP1-205ENST00000614488 DPP8Q6V1X1 898 aaPredicted RBP7.34□□□□□ -1.23
SCAMP1-205ENST00000614488 KIF18BQ86Y91 864 aa7.34□□□□□ -1.23
SCAMP1-205ENST00000614488 ZDHHC14Q8IZN3 488 aa7.34□□□□□ -1.23
SCAMP1-205ENST00000614488 KLHL36Q8N4N3 616 aa7.34□□□□□ -1.23
SCAMP1-205ENST00000614488 STPG3Q8N7X2 389 aa7.34□□□□□ -1.23
SCAMP1-205ENST00000614488 ASB15Q8WXK1 588 aa7.34□□□□□ -1.23
SCAMP1-205ENST00000614488 C20orf173Q96LM9 149 aa7.34□□□□□ -1.23
SCAMP1-205ENST00000614488 TACO1Q9BSH4 297 aaKnown RBP7.34□□□□□ -1.23
SCAMP1-205ENST00000614488 GALNT8Q9NY28 637 aa7.34□□□□□ -1.23
SCAMP1-205ENST00000614488 PTPDC1A2A3K4 754 aa7.33□□□□□ -1.24
SCAMP1-205ENST00000614488 H0Y858 1186 aa7.33□□□□□ -1.24
SCAMP1-205ENST00000614488 MPIG6BO95866 241 aa7.33□□□□□ -1.24
SCAMP1-205ENST00000614488 MC4RP32245 332 aa7.33□□□□□ -1.24
SCAMP1-205ENST00000614488 FNTBP49356 437 aa7.33□□□□□ -1.24
SCAMP1-205ENST00000614488 CTSWP56202 376 aa7.33□□□□□ -1.24
SCAMP1-205ENST00000614488 NFIXQ14938 502 aa7.33□□□□□ -1.24
SCAMP1-205ENST00000614488 C21orf62-AS1Q17RA5 79 aa7.33□□□□□ -1.24
SCAMP1-205ENST00000614488 TAF7LQ5H9L4 462 aa7.33□□□□□ -1.24
SCAMP1-205ENST00000614488 BORAQ6PGQ7 559 aa7.33□□□□□ -1.24
SCAMP1-205ENST00000614488 LGI4Q8N135 537 aa7.33□□□□□ -1.24
SCAMP1-205ENST00000614488 MBD6Q96DN6 1003 aa7.33□□□□□ -1.24
SCAMP1-205ENST00000614488 FAM83GA6ND36 823 aa7.32□□□□□ -1.24
SCAMP1-205ENST00000614488 RASSF10A6NK89 507 aa7.32□□□□□ -1.24
SCAMP1-205ENST00000614488 TMEM132BQ14DG7 1078 aa7.32□□□□□ -1.24
SCAMP1-205ENST00000614488 STILQ15468 1287 aa7.32□□□□□ -1.24
SCAMP1-205ENST00000614488 CATSPEREQ5SY80 951 aa7.32□□□□□ -1.24
SCAMP1-205ENST00000614488 CXXC5Q7LFL8 322 aaKnown RBP7.32□□□□□ -1.24
SCAMP1-205ENST00000614488 REXO1L1PQ8IX06 675 aa7.32□□□□□ -1.24
SCAMP1-205ENST00000614488 PPM1KQ8N3J5 372 aa7.32□□□□□ -1.24
SCAMP1-205ENST00000614488 NUDT10Q8NFP7 164 aa7.32□□□□□ -1.24
SCAMP1-205ENST00000614488 DDX1Q92499 740 aaKnown RBP7.32□□□□□ -1.24
SCAMP1-205ENST00000614488 NUDT11Q96G61 164 aa7.32□□□□□ -1.24
SCAMP1-205ENST00000614488 GBP4Q96PP9 640 aa7.32□□□□□ -1.24
SCAMP1-205ENST00000614488 ADAM7Q9H2U9 754 aa7.32□□□□□ -1.24
SCAMP1-205ENST00000614488 BARX1Q9HBU1 254 aaPredicted RBP7.32□□□□□ -1.24
SCAMP1-205ENST00000614488 ACSS2Q9NR19 701 aa7.32□□□□□ -1.24
SCAMP1-205ENST00000614488 H7C1D1 291 aa7.31□□□□□ -1.24
SCAMP1-205ENST00000614488 KRT37O76014 449 aa7.31□□□□□ -1.24
SCAMP1-205ENST00000614488 HSD3B2P26439 372 aa7.31□□□□□ -1.24
SCAMP1-205ENST00000614488 NFATC3Q12968 1075 aa7.31□□□□□ -1.24
SCAMP1-205ENST00000614488 SDE2Q6IQ49 451 aa7.31□□□□□ -1.24
SCAMP1-205ENST00000614488 LILRA6Q6PI73 481 aa7.31□□□□□ -1.24
SCAMP1-205ENST00000614488 PLEKHH3Q7Z736 793 aa7.31□□□□□ -1.24
SCAMP1-205ENST00000614488 DHX37Q8IY37 1157 aaKnown RBP7.31□□□□□ -1.24
SCAMP1-205ENST00000614488 CXorf38Q8TB03 319 aa7.31□□□□□ -1.24
SCAMP1-205ENST00000614488 BTBD2Q9BX70 525 aa7.31□□□□□ -1.24
SCAMP1-205ENST00000614488 ADAM29Q9UKF5 820 aa7.31□□□□□ -1.24
SCAMP1-205ENST00000614488 KPNA6O60684 536 aa7.3□□□□□ -1.24
SCAMP1-205ENST00000614488 CUTAO60888 179 aa7.3□□□□□ -1.24
SCAMP1-205ENST00000614488 CNR2P34972 360 aa7.3□□□□□ -1.24
SCAMP1-205ENST00000614488 NEK4P51957 841 aa7.3□□□□□ -1.24
SCAMP1-205ENST00000614488 KIF11P52732 1056 aa7.3□□□□□ -1.24
SCAMP1-205ENST00000614488 IL13RA1P78552 427 aa7.3□□□□□ -1.24
SCAMP1-205ENST00000614488 ZNF174Q15697 407 aa7.3□□□□□ -1.24
SCAMP1-205ENST00000614488 CNNM4Q6P4Q7 775 aa7.3□□□□□ -1.24
SCAMP1-205ENST00000614488 Q6ZUG5 572 aa7.3□□□□□ -1.24
SCAMP1-205ENST00000614488 AHI1Q8N157 1196 aa7.3□□□□□ -1.24
SCAMP1-205ENST00000614488 HIPK4Q8NE63 616 aa7.3□□□□□ -1.24
SCAMP1-205ENST00000614488 AJUBAQ96IF1 538 aa7.3□□□□□ -1.24
SCAMP1-205ENST00000614488 AMNQ9BXJ7 453 aa7.3□□□□□ -1.24
SCAMP1-205ENST00000614488 PCIF1Q9H4Z3 704 aa7.3□□□□□ -1.24
SCAMP1-205ENST00000614488 UCKL1Q9NWZ5 548 aa7.3□□□□□ -1.24
SCAMP1-205ENST00000614488 FBXO10Q9UK96 956 aa7.3□□□□□ -1.24
SCAMP1-205ENST00000614488 GOLGA6L22H0YM25 854 aa7.29□□□□□ -1.24
SCAMP1-205ENST00000614488 DVL2O14641 736 aa7.29□□□□□ -1.24
SCAMP1-205ENST00000614488 MAFO75444 373 aaPredicted RBP7.29□□□□□ -1.24
SCAMP1-205ENST00000614488 F2P00734 622 aa7.29□□□□□ -1.24
SCAMP1-205ENST00000614488 CYP17A1P05093 508 aa7.29□□□□□ -1.24
SCAMP1-205ENST00000614488 POLD1P28340 1107 aa7.29□□□□□ -1.24
SCAMP1-205ENST00000614488 ECE1P42892 770 aa7.29□□□□□ -1.24
SCAMP1-205ENST00000614488 UBXN11Q5T124 520 aa7.29□□□□□ -1.24
SCAMP1-205ENST00000614488 ERICH6BQ5W0A0 696 aa7.29□□□□□ -1.24
SCAMP1-205ENST00000614488 CREB3L3Q68CJ9 461 aa7.29□□□□□ -1.24
SCAMP1-205ENST00000614488 RTN4RL1Q86UN2 441 aaPredicted RBP7.29□□□□□ -1.24
SCAMP1-205ENST00000614488 KIAA1958Q8N8K9 716 aa7.29□□□□□ -1.24
SCAMP1-205ENST00000614488 CALML6Q8TD86 181 aa7.29□□□□□ -1.24
SCAMP1-205ENST00000614488 E2F7Q96AV8 911 aa7.29□□□□□ -1.24
SCAMP1-205ENST00000614488 TARS2Q9BW92 718 aaKnown RBP7.29□□□□□ -1.24
SCAMP1-205ENST00000614488 MTFR1LQ9H019 292 aa7.29□□□□□ -1.24
SCAMP1-205ENST00000614488 KATNBL1Q9H079 304 aa7.29□□□□□ -1.24
SCAMP1-205ENST00000614488 OR10A5Q9H207 317 aa7.29□□□□□ -1.24
SCAMP1-205ENST00000614488 ZKSCAN5Q9Y2L8 839 aa7.29□□□□□ -1.24
SCAMP1-205ENST00000614488 DUSP10Q9Y6W6 482 aa7.29□□□□□ -1.24
SCAMP1-205ENST00000614488 PRAMEF22A3QJZ6 481 aa7.28□□□□□ -1.24
SCAMP1-205ENST00000614488 PRICKLE3O43900 615 aaPredicted RBP7.28□□□□□ -1.24
SCAMP1-205ENST00000614488 B4GALT3O60512 393 aa7.28□□□□□ -1.24
SCAMP1-205ENST00000614488 GAS7O60861 476 aa7.28□□□□□ -1.24
SCAMP1-205ENST00000614488 ALDH6A1Q02252 535 aaKnown RBP7.28□□□□□ -1.24
SCAMP1-205ENST00000614488 DSG1Q02413 1049 aa7.28□□□□□ -1.24
SCAMP1-205ENST00000614488 TOP3AQ13472 1001 aaPredicted RBP7.28□□□□□ -1.24
SCAMP1-205ENST00000614488 SURF1Q15526 300 aa7.28□□□□□ -1.24
SCAMP1-205ENST00000614488 WDR72Q3MJ13 1102 aa7.28□□□□□ -1.24
SCAMP1-205ENST00000614488 KANK2Q63ZY3 851 aa7.28□□□□□ -1.24
SCAMP1-205ENST00000614488 RELTQ969Z4 430 aa7.28□□□□□ -1.24
SCAMP1-205ENST00000614488 FOXRED1Q96CU9 486 aaPredicted RBP7.28□□□□□ -1.24
SCAMP1-205ENST00000614488 FOXB1Q99853 325 aa7.28□□□□□ -1.24
SCAMP1-205ENST00000614488 INVSQ9Y283 1065 aa7.28□□□□□ -1.24
SCAMP1-205ENST00000614488 SPO11Q9Y5K1 396 aa7.28□□□□□ -1.24
SCAMP1-205ENST00000614488 GSG1L2A8MUP6 293 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms