RNA–Protein interactions for RNA: ENST00000610884.4

SNAPC3-207, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-207ENST00000610884 USO1O60763 962 aaKnown RBP20.17■□□□□ 0.82
SNAPC3-207ENST00000610884 KCNA2P16389 499 aa20.17■□□□□ 0.82
SNAPC3-207ENST00000610884 ALDH5A1P51649 535 aaPredicted RBP20.17■□□□□ 0.82
SNAPC3-207ENST00000610884 RBL2Q08999 1139 aa20.17■□□□□ 0.82
SNAPC3-207ENST00000610884 LY6KQ17RY6 165 aa20.17■□□□□ 0.82
SNAPC3-207ENST00000610884 CENPPQ6IPU0 288 aa20.17■□□□□ 0.82
SNAPC3-207ENST00000610884 CNOT6LQ96LI5 555 aaKnown RBP20.17■□□□□ 0.82
SNAPC3-207ENST00000610884 LCTP09848 1927 aa20.17■□□□□ 0.82
SNAPC3-207ENST00000610884 GCNT3O95395 438 aa20.17■□□□□ 0.82
SNAPC3-207ENST00000610884 MAP3K20Q9NYL2 800 aaKnown RBP20.17■□□□□ 0.82
SNAPC3-207ENST00000610884 GABBR1Q9UBS5 961 aa20.17■□□□□ 0.82
SNAPC3-207ENST00000610884 PAXBP1Q9Y5B6 917 aa20.17■□□□□ 0.82
SNAPC3-207ENST00000610884 RBBP6Q7Z6E9 1792 aaKnown RBP20.17■□□□□ 0.82
SNAPC3-207ENST00000610884 CLIC2O15247 247 aa20.16■□□□□ 0.82
SNAPC3-207ENST00000610884 SPECC1LQ69YQ0 1117 aa20.16■□□□□ 0.82
SNAPC3-207ENST00000610884 NACC1Q96RE7 527 aa20.16■□□□□ 0.82
SNAPC3-207ENST00000610884 TUBGCP2Q9BSJ2 902 aa20.16■□□□□ 0.82
SNAPC3-207ENST00000610884 BACH1O14867 736 aa20.16■□□□□ 0.82
SNAPC3-207ENST00000610884 P4HBP07237 508 aaKnown RBP20.16■□□□□ 0.82
SNAPC3-207ENST00000610884 SFPQP23246 707 aaKnown RBP eCLIP20.16■□□□□ 0.82
SNAPC3-207ENST00000610884 PADI6Q6TGC4 694 aa20.16■□□□□ 0.82
SNAPC3-207ENST00000610884 FASTKD5Q7L8L6 764 aaKnown RBP20.16■□□□□ 0.82
SNAPC3-207ENST00000610884 CHST13Q8NET6 341 aa20.16■□□□□ 0.82
SNAPC3-207ENST00000610884 ZC3H4Q9UPT8 1303 aaKnown RBP20.16■□□□□ 0.82
SNAPC3-207ENST00000610884 ARHGEF35A5YM69 484 aa20.15■□□□□ 0.82
SNAPC3-207ENST00000610884 ZNF862O60290 1169 aa20.15■□□□□ 0.82
SNAPC3-207ENST00000610884 TBCAO75347 108 aaKnown RBP20.15■□□□□ 0.82
SNAPC3-207ENST00000610884 YWHABP31946 246 aaKnown RBP20.15■□□□□ 0.82
SNAPC3-207ENST00000610884 MTIF2P46199 727 aaKnown RBP20.15■□□□□ 0.82
SNAPC3-207ENST00000610884 QARSP47897 775 aaKnown RBP20.15■□□□□ 0.82
SNAPC3-207ENST00000610884 STXBP2Q15833 593 aa20.15■□□□□ 0.82
SNAPC3-207ENST00000610884 GJC2Q5T442 439 aaPredicted RBP20.15■□□□□ 0.82
SNAPC3-207ENST00000610884 GUF1Q8N442 669 aaKnown RBP20.15■□□□□ 0.82
SNAPC3-207ENST00000610884 TBC1D22BQ9NU19 505 aa20.15■□□□□ 0.82
SNAPC3-207ENST00000610884 MYPNQ86TC9 1320 aa20.15■□□□□ 0.82
SNAPC3-207ENST00000610884 TISP43B9A030 160 aa20.15■□□□□ 0.82
SNAPC3-207ENST00000610884 CASP14P31944 242 aa20.15■□□□□ 0.82
SNAPC3-207ENST00000610884 FXR1P51114 621 aaKnown RBP eCLIP20.15■□□□□ 0.82
SNAPC3-207ENST00000610884 ERVK-9P63128 1117 aa20.15■□□□□ 0.82
SNAPC3-207ENST00000610884 ERVK-24P63145 666 aa20.15■□□□□ 0.82
SNAPC3-207ENST00000610884 CCDC60Q8IWA6 550 aaPredicted RBP20.15■□□□□ 0.82
SNAPC3-207ENST00000610884 DAW1Q8N136 415 aa20.15■□□□□ 0.82
SNAPC3-207ENST00000610884 C2orf69Q8N8R5 385 aa20.15■□□□□ 0.82
SNAPC3-207ENST00000610884 LRRC27Q9C0I9 530 aa20.15■□□□□ 0.82
SNAPC3-207ENST00000610884 ZSWIM4Q9H7M6 989 aa20.15■□□□□ 0.82
SNAPC3-207ENST00000610884 LIMA1Q9UHB6 759 aaKnown RBP20.15■□□□□ 0.82
SNAPC3-207ENST00000610884 HIP1RO75146 1068 aa20.14■□□□□ 0.82
SNAPC3-207ENST00000610884 OSBPP22059 807 aa20.14■□□□□ 0.82
SNAPC3-207ENST00000610884 HUNKP57058 714 aa20.14■□□□□ 0.82
SNAPC3-207ENST00000610884 APBA1Q02410 837 aa20.14■□□□□ 0.82
SNAPC3-207ENST00000610884 ANO5Q75V66 913 aa20.14■□□□□ 0.82
SNAPC3-207ENST00000610884 COPS5Q92905 334 aa20.14■□□□□ 0.82
SNAPC3-207ENST00000610884 FGD4Q96M96 766 aa20.14■□□□□ 0.82
SNAPC3-207ENST00000610884 KIFC3Q9BVG8 833 aa20.14■□□□□ 0.82
SNAPC3-207ENST00000610884 PDGFCQ9NRA1 345 aa20.14■□□□□ 0.82
SNAPC3-207ENST00000610884 MCM3APO60318 1980 aa20.14■□□□□ 0.81
SNAPC3-207ENST00000610884 FAM13AO94988 1023 aa20.14■□□□□ 0.81
SNAPC3-207ENST00000610884 ARIH2O95376 493 aa20.14■□□□□ 0.81
SNAPC3-207ENST00000610884 SYCP1Q15431 976 aa20.14■□□□□ 0.81
SNAPC3-207ENST00000610884 NIPA1Q7RTP0 329 aa20.14■□□□□ 0.81
SNAPC3-207ENST00000610884 FBXO16Q8IX29 292 aaPredicted RBP20.14■□□□□ 0.81
SNAPC3-207ENST00000610884 TC2NQ8N9U0 490 aa20.14■□□□□ 0.81
SNAPC3-207ENST00000610884 JPH1Q9HDC5 661 aaPredicted RBP20.14■□□□□ 0.81
SNAPC3-207ENST00000610884 MAGEC2Q9UBF1 373 aaPredicted RBP20.14■□□□□ 0.81
SNAPC3-207ENST00000610884 RARRES1P49788 294 aa20.13■□□□□ 0.81
SNAPC3-207ENST00000610884 ACTR2P61160 394 aa20.13■□□□□ 0.81
SNAPC3-207ENST00000610884 MTF1Q14872 753 aa20.13■□□□□ 0.81
SNAPC3-207ENST00000610884 XKR9Q5GH70 373 aa20.13■□□□□ 0.81
SNAPC3-207ENST00000610884 CT47A1Q5JQC4 288 aaPredicted RBP20.13■□□□□ 0.81
SNAPC3-207ENST00000610884 ODR4Q5SWX8 454 aa20.13■□□□□ 0.81
SNAPC3-207ENST00000610884 USP20Q9Y2K6 914 aa20.13■□□□□ 0.81
SNAPC3-207ENST00000610884 FRMD3A2A2Y4 597 aa20.13■□□□□ 0.81
SNAPC3-207ENST00000610884 LRRC10BA6NIK2 292 aa20.13■□□□□ 0.81
SNAPC3-207ENST00000610884 ITGBL1O95965 494 aaPredicted RBP20.13■□□□□ 0.81
SNAPC3-207ENST00000610884 MB21D1Q8N884 522 aa20.13■□□□□ 0.81
SNAPC3-207ENST00000610884 MMP19Q99542 508 aa20.13■□□□□ 0.81
SNAPC3-207ENST00000610884 NOC4LQ9BVI4 516 aaKnown RBP20.13■□□□□ 0.81
SNAPC3-207ENST00000610884 KCTD10Q9H3F6 313 aa20.13■□□□□ 0.81
SNAPC3-207ENST00000610884 BICDL2A1A5D9 508 aa20.12■□□□□ 0.81
SNAPC3-207ENST00000610884 SPATA31C2B4DYI2 1134 aa20.12■□□□□ 0.81
SNAPC3-207ENST00000610884 TBX2Q13207 712 aaPredicted RBP20.12■□□□□ 0.81
SNAPC3-207ENST00000610884 FILIP1LQ4L180 1135 aa20.12■□□□□ 0.81
SNAPC3-207ENST00000610884 MIIPQ5JXC2 388 aa20.12■□□□□ 0.81
SNAPC3-207ENST00000610884 LRRC55Q6ZSA7 311 aa20.12■□□□□ 0.81
SNAPC3-207ENST00000610884 FAM133AQ8N9E0 248 aa20.12■□□□□ 0.81
SNAPC3-207ENST00000610884 SLC9A2Q9UBY0 812 aa20.12■□□□□ 0.81
SNAPC3-207ENST00000610884 PCDHA10Q9Y5I2 948 aa20.12■□□□□ 0.81
SNAPC3-207ENST00000610884 WDR64B1ANS9 1081 aa20.12■□□□□ 0.81
SNAPC3-207ENST00000610884 GYPCP04921 128 aa20.12■□□□□ 0.81
SNAPC3-207ENST00000610884 PBX1P40424 430 aa20.12■□□□□ 0.81
SNAPC3-207ENST00000610884 PSMD2Q13200 908 aa20.12■□□□□ 0.81
SNAPC3-207ENST00000610884 PTPN14Q15678 1187 aa20.12■□□□□ 0.81
SNAPC3-207ENST00000610884 NOC3LQ8WTT2 800 aaKnown RBP20.12■□□□□ 0.81
SNAPC3-207ENST00000610884 GPRASP2Q96D09 838 aa20.12■□□□□ 0.81
SNAPC3-207ENST00000610884 GTPBP4Q9BZE4 634 aaKnown RBP20.12■□□□□ 0.81
SNAPC3-207ENST00000610884 THAP9Q9H5L6 903 aa20.12■□□□□ 0.81
SNAPC3-207ENST00000610884 IMPACTQ9P2X3 320 aa20.12■□□□□ 0.81
SNAPC3-207ENST00000610884 SOCS7O14512 581 aa20.11■□□□□ 0.81
SNAPC3-207ENST00000610884 EIF3JO75822 258 aaKnown RBP20.11■□□□□ 0.81
SNAPC3-207ENST00000610884 MAPK7Q13164 816 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 148.3 ms