RNA–Protein interactions for RNA: ENST00000602171.5

FARP1-239, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-239ENST00000602171 IKQ13123 557 aaPredicted RBP8.6□□□□□ -1.03
FARP1-239ENST00000602171 COG2Q14746 738 aa8.6□□□□□ -1.03
FARP1-239ENST00000602171 CCDC96Q2M329 555 aa8.6□□□□□ -1.03
FARP1-239ENST00000602171 ASPRV1Q53RT3 343 aa8.6□□□□□ -1.03
FARP1-239ENST00000602171 Q6ZUG5 572 aa8.6□□□□□ -1.03
FARP1-239ENST00000602171 FAM160B2Q86V87 743 aa8.6□□□□□ -1.03
FARP1-239ENST00000602171 SPICE1Q8N0Z3 855 aa8.6□□□□□ -1.03
FARP1-239ENST00000602171 CTCFLQ8NI51 663 aaPredicted RBP8.6□□□□□ -1.03
FARP1-239ENST00000602171 SMCR8Q8TEV9 937 aaPredicted RBP8.6□□□□□ -1.03
FARP1-239ENST00000602171 UPF3BQ9BZI7 483 aaKnown RBP8.6□□□□□ -1.03
FARP1-239ENST00000602171 TANGO6Q9C0B7 1094 aa8.6□□□□□ -1.03
FARP1-239ENST00000602171 RPAP3Q9H6T3 665 aaPredicted RBP8.6□□□□□ -1.03
FARP1-239ENST00000602171 C7orf69Q9H7B7 122 aa8.6□□□□□ -1.03
FARP1-239ENST00000602171 LY9Q9HBG7 655 aa8.6□□□□□ -1.03
FARP1-239ENST00000602171 ZFYVE28Q9HCC9 887 aa8.6□□□□□ -1.03
FARP1-239ENST00000602171 SAGE1Q9NXZ1 904 aa8.6□□□□□ -1.03
FARP1-239ENST00000602171 FEM1BQ9UK73 627 aa8.6□□□□□ -1.03
FARP1-239ENST00000602171 PNMA2Q9UL42 364 aa8.6□□□□□ -1.03
FARP1-239ENST00000602171 HIF3AQ9Y2N7 669 aa8.6□□□□□ -1.03
FARP1-239ENST00000602171 CTDP1Q9Y5B0 961 aaPredicted RBP8.6□□□□□ -1.03
FARP1-239ENST00000602171 MYPNQ86TC9 1320 aa8.59□□□□□ -1.03
FARP1-239ENST00000602171 OTOFQ9HC10 1997 aa8.59□□□□□ -1.03
FARP1-239ENST00000602171 MYH8P13535 1937 aa8.59□□□□□ -1.03
FARP1-239ENST00000602171 ZBTB43O43298 467 aa8.59□□□□□ -1.03
FARP1-239ENST00000602171 FLOT1O75955 427 aa8.59□□□□□ -1.03
FARP1-239ENST00000602171 TGFB1P01137 390 aa8.59□□□□□ -1.03
FARP1-239ENST00000602171 PDHBP11177 359 aa8.59□□□□□ -1.03
FARP1-239ENST00000602171 GCLCP48506 637 aaPredicted RBP8.59□□□□□ -1.03
FARP1-239ENST00000602171 MCM2P49736 904 aa8.59□□□□□ -1.03
FARP1-239ENST00000602171 IRAK1P51617 712 aa8.59□□□□□ -1.03
FARP1-239ENST00000602171 STAT2P52630 851 aa8.59□□□□□ -1.03
FARP1-239ENST00000602171 MOGSQ13724 837 aa8.59□□□□□ -1.03
FARP1-239ENST00000602171 TAF1CQ15572 869 aaPredicted RBP8.59□□□□□ -1.03
FARP1-239ENST00000602171 NOM1Q5C9Z4 860 aaKnown RBP8.59□□□□□ -1.03
FARP1-239ENST00000602171 FAM83BQ5T0W9 1011 aa8.59□□□□□ -1.03
FARP1-239ENST00000602171 CATSPERGQ6ZRH7 1159 aa8.59□□□□□ -1.03
FARP1-239ENST00000602171 ZDHHC13Q8IUH4 622 aa8.59□□□□□ -1.03
FARP1-239ENST00000602171 TRIM42Q8IWZ5 723 aa8.59□□□□□ -1.03
FARP1-239ENST00000602171 FAM20CQ8IXL6 584 aa8.59□□□□□ -1.03
FARP1-239ENST00000602171 ZNF654Q8IZM8 581 aa8.59□□□□□ -1.03
FARP1-239ENST00000602171 DNAJC5GQ8N7S2 189 aa8.59□□□□□ -1.03
FARP1-239ENST00000602171 PRPF38AQ8NAV1 312 aaKnown RBP8.59□□□□□ -1.03
FARP1-239ENST00000602171 NUP133Q8WUM0 1156 aa8.59□□□□□ -1.03
FARP1-239ENST00000602171 FOXD4L4Q8WXT5 416 aaPredicted RBP8.59□□□□□ -1.03
FARP1-239ENST00000602171 BRF1Q92994 677 aa8.59□□□□□ -1.03
FARP1-239ENST00000602171 FAM83CQ9BQN1 747 aa8.59□□□□□ -1.03
FARP1-239ENST00000602171 LZTS2Q9BRK4 669 aa8.59□□□□□ -1.03
FARP1-239ENST00000602171 LRRC2Q9BYS8 371 aa8.59□□□□□ -1.03
FARP1-239ENST00000602171 AGXT2Q9BYV1 514 aa8.59□□□□□ -1.03
FARP1-239ENST00000602171 RBM28Q9NW13 759 aaKnown RBP8.59□□□□□ -1.03
FARP1-239ENST00000602171 CNTN3Q9P232 1028 aa8.59□□□□□ -1.03
FARP1-239ENST00000602171 KANSL3Q9P2N6 904 aa8.59□□□□□ -1.03
FARP1-239ENST00000602171 SEPT3Q9UH03 358 aa8.59□□□□□ -1.03
FARP1-239ENST00000602171 NAP1L2Q9ULW6 460 aaPredicted RBP8.59□□□□□ -1.03
FARP1-239ENST00000602171 MTMR7Q9Y216 660 aa8.59□□□□□ -1.03
FARP1-239ENST00000602171 KLF18A0A0U1RQI7 1052 aa8.58□□□□□ -1.04
FARP1-239ENST00000602171 TMEM232C9JQI7 657 aa8.58□□□□□ -1.04
FARP1-239ENST00000602171 PDE2AO00408 941 aaPredicted RBP8.58□□□□□ -1.04
FARP1-239ENST00000602171 IGF2BP3O00425 579 aaKnown RBP eCLIP8.58□□□□□ -1.04
FARP1-239ENST00000602171 DHX16O60231 1041 aaKnown RBP8.58□□□□□ -1.04
FARP1-239ENST00000602171 EIF4EBP3O60516 100 aaPredicted RBP8.58□□□□□ -1.04
FARP1-239ENST00000602171 SNHG28P0DPA3 235 aa8.58□□□□□ -1.04
FARP1-239ENST00000602171 CPA1P15085 419 aa8.58□□□□□ -1.04
FARP1-239ENST00000602171 MZF1P28698 734 aaPredicted RBP8.58□□□□□ -1.04
FARP1-239ENST00000602171 EVCP57679 992 aa8.58□□□□□ -1.04
FARP1-239ENST00000602171 ZNF543Q08ER8 600 aa8.58□□□□□ -1.04
FARP1-239ENST00000602171 TROAPQ12815 778 aa8.58□□□□□ -1.04
FARP1-239ENST00000602171 TRAF1Q13077 416 aa8.58□□□□□ -1.04
FARP1-239ENST00000602171 TREML2Q5T2D2 321 aa8.58□□□□□ -1.04
FARP1-239ENST00000602171 ALKBH2Q6NS38 261 aa8.58□□□□□ -1.04
FARP1-239ENST00000602171 CPLX2Q6PUV4 134 aaKnown RBP8.58□□□□□ -1.04
FARP1-239ENST00000602171 FAM43AQ8N2R8 423 aa8.58□□□□□ -1.04
FARP1-239ENST00000602171 MB21D1Q8N884 522 aa8.58□□□□□ -1.04
FARP1-239ENST00000602171 FANCBQ8NB91 859 aa8.58□□□□□ -1.04
FARP1-239ENST00000602171 EDEM1Q92611 657 aa8.58□□□□□ -1.04
FARP1-239ENST00000602171 ZNF274Q96GC6 653 aaPredicted RBP8.58□□□□□ -1.04
FARP1-239ENST00000602171 TCEANC2Q96MN5 208 aa8.58□□□□□ -1.04
FARP1-239ENST00000602171 PTPN18Q99952 460 aa8.58□□□□□ -1.04
FARP1-239ENST00000602171 KRTAP4-12Q9BQ66 201 aa8.58□□□□□ -1.04
FARP1-239ENST00000602171 SLF1Q9BQI6 1058 aa8.58□□□□□ -1.04
FARP1-239ENST00000602171 ASCC2Q9H1I8 757 aaPredicted RBP8.58□□□□□ -1.04
FARP1-239ENST00000602171 DZANK1Q9NVP4 752 aa8.58□□□□□ -1.04
FARP1-239ENST00000602171 ATAD5Q96QE3 1844 aa8.58□□□□□ -1.04
FARP1-239ENST00000602171 GREB1LQ9C091 1923 aaPredicted RBP8.58□□□□□ -1.04
FARP1-239ENST00000602171 GOLGA8AA7E2F4 631 aa8.57□□□□□ -1.04
FARP1-239ENST00000602171 GOLGA8BA8MQT2 603 aa8.57□□□□□ -1.04
FARP1-239ENST00000602171 DDX3YO15523 660 aaKnown RBP8.57□□□□□ -1.04
FARP1-239ENST00000602171 TLR2O60603 784 aa8.57□□□□□ -1.04
FARP1-239ENST00000602171 ADAM11O75078 769 aa8.57□□□□□ -1.04
FARP1-239ENST00000602171 ZBED4O75132 1171 aa8.57□□□□□ -1.04
FARP1-239ENST00000602171 SMARCA1P28370 1054 aa8.57□□□□□ -1.04
FARP1-239ENST00000602171 COPB2P35606 906 aa8.57□□□□□ -1.04
FARP1-239ENST00000602171 METAP2P50579 478 aaKnown RBP eCLIP8.57□□□□□ -1.04
FARP1-239ENST00000602171 HERVK_113P62684 666 aa8.57□□□□□ -1.04
FARP1-239ENST00000602171 CCNA1P78396 465 aa8.57□□□□□ -1.04
FARP1-239ENST00000602171 DNM1Q05193 864 aaKnown RBP8.57□□□□□ -1.04
FARP1-239ENST00000602171 GRM4Q14833 912 aa8.57□□□□□ -1.04
FARP1-239ENST00000602171 ARHGEF6Q15052 776 aa8.57□□□□□ -1.04
FARP1-239ENST00000602171 FDX2Q6P4F2 183 aa8.57□□□□□ -1.04
FARP1-239ENST00000602171 APOA5Q6Q788 366 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms