RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 RIT2Q99578 217 aa25.27■■□□□ 1.64
GTF2F1-204ENST00000594965 MAFBQ9Y5Q3 323 aaPredicted RBP25.27■■□□□ 1.64
GTF2F1-204ENST00000594965 KCNJ6P48051 423 aa25.26■■□□□ 1.63
GTF2F1-204ENST00000594965 RBM25P49756 843 aaKnown RBP25.26■■□□□ 1.63
GTF2F1-204ENST00000594965 PDXDC2PQ6P474 469 aa25.26■■□□□ 1.63
GTF2F1-204ENST00000594965 TNPO1Q92973 898 aaKnown RBP25.26■■□□□ 1.63
GTF2F1-204ENST00000594965 LIMCH1Q9UPQ0 1083 aa25.26■■□□□ 1.63
GTF2F1-204ENST00000594965 PCDHA2Q9Y5H9 948 aa25.26■■□□□ 1.63
GTF2F1-204ENST00000594965 CCDC194A0A1B0GVG4 234 aa25.25■■□□□ 1.63
GTF2F1-204ENST00000594965 ZBTB42B2RXF5 422 aa25.25■■□□□ 1.63
GTF2F1-204ENST00000594965 HBP1O60381 514 aa25.25■■□□□ 1.63
GTF2F1-204ENST00000594965 PSMD10O75832 226 aa25.25■■□□□ 1.63
GTF2F1-204ENST00000594965 PSAPP07602 524 aa25.25■■□□□ 1.63
GTF2F1-204ENST00000594965 MTHFD1LQ6UB35 978 aa25.25■■□□□ 1.63
GTF2F1-204ENST00000594965 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.25■■□□□ 1.635e-8■■□□□ 13.9
GTF2F1-204ENST00000594965 ETNPPLQ8TBG4 499 aa25.25■■□□□ 1.63
GTF2F1-204ENST00000594965 TNFRSF25Q93038 417 aa25.25■■□□□ 1.63
GTF2F1-204ENST00000594965 UNC45AQ9H3U1 944 aa25.25■■□□□ 1.63
GTF2F1-204ENST00000594965 SLC28A3Q9HAS3 691 aa25.25■■□□□ 1.63
GTF2F1-204ENST00000594965 IGSF9BQ9UPX0 1349 aa25.24■■□□□ 1.63
GTF2F1-204ENST00000594965 SLC37A4O43826 429 aa25.24■■□□□ 1.63
GTF2F1-204ENST00000594965 GAS7O60861 476 aa25.24■■□□□ 1.63
GTF2F1-204ENST00000594965 EFCAB14O75071 495 aa25.24■■□□□ 1.63
GTF2F1-204ENST00000594965 ARHGEF15O94989 841 aa25.24■■□□□ 1.63
GTF2F1-204ENST00000594965 CA3P07451 260 aa25.24■■□□□ 1.63
GTF2F1-204ENST00000594965 LRCH2Q5VUJ6 765 aa25.24■■□□□ 1.63
GTF2F1-204ENST00000594965 B3GNT9Q6UX72 402 aa25.24■■□□□ 1.63
GTF2F1-204ENST00000594965 PIK3AP1Q6ZUJ8 805 aa25.24■■□□□ 1.63
GTF2F1-204ENST00000594965 TEKT3Q9BXF9 490 aa25.24■■□□□ 1.63
GTF2F1-204ENST00000594965 FAM49AQ9H0Q0 323 aaPredicted RBP25.24■■□□□ 1.63
GTF2F1-204ENST00000594965 DISC1Q9NRI5 854 aa25.24■■□□□ 1.63
GTF2F1-204ENST00000594965 GABBR1Q9UBS5 961 aa25.24■■□□□ 1.63
GTF2F1-204ENST00000594965 COL1A2P08123 1366 aa25.23■■□□□ 1.63
GTF2F1-204ENST00000594965 FAM205CA6NFA0 338 aa25.23■■□□□ 1.63
GTF2F1-204ENST00000594965 WDR64B1ANS9 1081 aa25.23■■□□□ 1.63
GTF2F1-204ENST00000594965 NR5A1Q13285 461 aa25.23■■□□□ 1.63
GTF2F1-204ENST00000594965 LETM2Q2VYF4 491 aa25.23■■□□□ 1.63
GTF2F1-204ENST00000594965 PPP2R2DQ66LE6 453 aa25.23■■□□□ 1.63
GTF2F1-204ENST00000594965 NEK8Q86SG6 692 aa25.23■■□□□ 1.63
GTF2F1-204ENST00000594965 RSPH3Q86UC2 560 aa25.23■■□□□ 1.63
GTF2F1-204ENST00000594965 BBXQ8WY36 941 aaPredicted RBP25.23■■□□□ 1.63
GTF2F1-204ENST00000594965 SEPT8Q92599 483 aa25.23■■□□□ 1.63
GTF2F1-204ENST00000594965 DDX25Q9UHL0 483 aaKnown RBP25.23■■□□□ 1.63
GTF2F1-204ENST00000594965 TCEAL9Q9UHQ7 104 aa25.23■■□□□ 1.63
GTF2F1-204ENST00000594965 SAMM50Q9Y512 469 aa25.23■■□□□ 1.63
GTF2F1-204ENST00000594965 CDY2AQ9Y6F7 541 aa25.23■■□□□ 1.63
GTF2F1-204ENST00000594965 CHD9Q3L8U1 2897 aa25.23■■□□□ 1.63
GTF2F1-204ENST00000594965 SMIM35A0A1B0GVV1 85 aa25.22■■□□□ 1.63
GTF2F1-204ENST00000594965 KLRC1P26715 233 aa25.22■■□□□ 1.63
GTF2F1-204ENST00000594965 KRT2P35908 639 aa25.22■■□□□ 1.63
GTF2F1-204ENST00000594965 MRPS6P82932 125 aaKnown RBP25.22■■□□□ 1.63
GTF2F1-204ENST00000594965 LPIN1Q14693 890 aa25.22■■□□□ 1.63
GTF2F1-204ENST00000594965 ZNF484Q5JVG2 852 aa25.22■■□□□ 1.63
GTF2F1-204ENST00000594965 CCDC83Q8IWF9 413 aa25.22■■□□□ 1.63
GTF2F1-204ENST00000594965 PRDM12Q9H4Q4 367 aa25.22■■□□□ 1.63
GTF2F1-204ENST00000594965 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.21■■□□□ 1.63
GTF2F1-204ENST00000594965 CHMP2AO43633 222 aa25.21■■□□□ 1.63
GTF2F1-204ENST00000594965 ZNF862O60290 1169 aa25.21■■□□□ 1.63
GTF2F1-204ENST00000594965 GJB5O95377 273 aa25.21■■□□□ 1.63
GTF2F1-204ENST00000594965 GHRP10912 638 aa25.21■■□□□ 1.63
GTF2F1-204ENST00000594965 FOSL2P15408 326 aa25.21■■□□□ 1.63
GTF2F1-204ENST00000594965 FOSBP53539 338 aa25.21■■□□□ 1.63
GTF2F1-204ENST00000594965 UGCGQ16739 394 aa25.21■■□□□ 1.63
GTF2F1-204ENST00000594965 FBXO47Q5MNV8 452 aa25.21■■□□□ 1.63
GTF2F1-204ENST00000594965 PPP4R3AQ6IN85 833 aa25.21■■□□□ 1.63
GTF2F1-204ENST00000594965 LCHNA4D1U4 455 aa25.2■■□□□ 1.62
GTF2F1-204ENST00000594965 KIF28PB7ZC32 967 aa25.2■■□□□ 1.62
GTF2F1-204ENST00000594965 MMP1P03956 469 aa25.2■■□□□ 1.62
GTF2F1-204ENST00000594965 RPLP2P05387 115 aaKnown RBP25.2■■□□□ 1.62
GTF2F1-204ENST00000594965 SFNP31947 248 aa25.2■■□□□ 1.62
GTF2F1-204ENST00000594965 JAK3P52333 1124 aa25.2■■□□□ 1.62
GTF2F1-204ENST00000594965 TMEM62Q0P6H9 643 aa25.2■■□□□ 1.62
GTF2F1-204ENST00000594965 KRT40Q6A162 431 aa25.2■■□□□ 1.62
GTF2F1-204ENST00000594965 CKAP2LQ8IYA6 745 aa25.2■■□□□ 1.62
GTF2F1-204ENST00000594965 APBB2Q92870 758 aa25.2■■□□□ 1.62
GTF2F1-204ENST00000594965 IFIH1Q9BYX4 1025 aaKnown RBP25.2■■□□□ 1.62
GTF2F1-204ENST00000594965 KCNMB3Q9NPA1 279 aa25.2■■□□□ 1.62
GTF2F1-204ENST00000594965 BTBD18B2RXH4 712 aa25.19■■□□□ 1.62
GTF2F1-204ENST00000594965 TLL1O43897 1013 aa25.19■■□□□ 1.62
GTF2F1-204ENST00000594965 C22orf31O95567 290 aa25.19■■□□□ 1.62
GTF2F1-204ENST00000594965 TAP1Q03518 808 aa25.19■■□□□ 1.62
GTF2F1-204ENST00000594965 ADGRE1Q14246 886 aa25.19■■□□□ 1.62
GTF2F1-204ENST00000594965 TRMT1LQ7Z2T5 733 aaKnown RBP25.19■■□□□ 1.62
GTF2F1-204ENST00000594965 ZSCAN31Q96LW9 406 aaPredicted RBP25.19■■□□□ 1.62
GTF2F1-204ENST00000594965 AGO3Q9H9G7 860 aaKnown RBP25.19■■□□□ 1.62
GTF2F1-204ENST00000594965 TRPV2Q9Y5S1 764 aa25.19■■□□□ 1.62
GTF2F1-204ENST00000594965 CCNT1O60563 726 aaKnown RBP25.18■■□□□ 1.62
GTF2F1-204ENST00000594965 IER5Q5VY09 327 aa25.18■■□□□ 1.62
GTF2F1-204ENST00000594965 MIER3Q7Z3K6 550 aa25.18■■□□□ 1.62
GTF2F1-204ENST00000594965 SPRED2Q7Z698 418 aa25.18■■□□□ 1.62
GTF2F1-204ENST00000594965 KIAA0319LQ8IZA0 1049 aa25.18■■□□□ 1.62
GTF2F1-204ENST00000594965 RDM1Q8NG50 284 aa25.18■■□□□ 1.62
GTF2F1-204ENST00000594965 HAS1Q92839 578 aa25.18■■□□□ 1.62
GTF2F1-204ENST00000594965 LLPHQ9BRT6 129 aaKnown RBP25.18■■□□□ 1.62
GTF2F1-204ENST00000594965 COL4A4P53420 1690 aaPredicted RBP25.17■■□□□ 1.62
GTF2F1-204ENST00000594965 AMHP03971 560 aa25.17■■□□□ 1.62
GTF2F1-204ENST00000594965 GCFC2P16383 781 aaKnown RBP25.17■■□□□ 1.62
GTF2F1-204ENST00000594965 PRKCEQ02156 737 aa25.17■■□□□ 1.62
GTF2F1-204ENST00000594965 FAM117BQ6P1L5 589 aa25.17■■□□□ 1.62
GTF2F1-204ENST00000594965 DIS3L2Q8IYB7 885 aaKnown RBP25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms