RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 SDF4Q9BRK5 362 aa11.79□□□□□ -0.52
SDF2-208ENST00000589788 PPP1R12CQ9BZL4 782 aa11.79□□□□□ -0.52
SDF2-208ENST00000589788 TRMT13Q9NUP7 481 aaKnown RBP11.79□□□□□ -0.52
SDF2-208ENST00000589788 H3BRB1 525 aa11.78□□□□□ -0.52
SDF2-208ENST00000589788 MEIS1O00470 390 aa11.78□□□□□ -0.52
SDF2-208ENST00000589788 ADAMTS3O15072 1205 aa11.78□□□□□ -0.52
SDF2-208ENST00000589788 CTDNEP1O95476 244 aa11.78□□□□□ -0.52
SDF2-208ENST00000589788 CYP3A4P08684 503 aa11.78□□□□□ -0.52
SDF2-208ENST00000589788 CYP2C18P33260 490 aa11.78□□□□□ -0.52
SDF2-208ENST00000589788 RABEP1Q15276 862 aa11.78□□□□□ -0.52
SDF2-208ENST00000589788 UTP14CQ5TAP6 766 aaKnown RBP11.78□□□□□ -0.52
SDF2-208ENST00000589788 MFSD5Q6N075 450 aa11.78□□□□□ -0.52
SDF2-208ENST00000589788 SESTD1Q86VW0 696 aa11.78□□□□□ -0.52
SDF2-208ENST00000589788 PLA2G4DQ86XP0 818 aa11.78□□□□□ -0.52
SDF2-208ENST00000589788 BLIDQ8IZY5 108 aa11.78□□□□□ -0.52
SDF2-208ENST00000589788 SEPT1Q8WYJ6 367 aa11.78□□□□□ -0.52
SDF2-208ENST00000589788 KCTD12Q96CX2 325 aaKnown RBP11.78□□□□□ -0.52
SDF2-208ENST00000589788 ZSCAN31Q96LW9 406 aaPredicted RBP11.78□□□□□ -0.52
SDF2-208ENST00000589788 KIF2CQ99661 725 aa11.78□□□□□ -0.52
SDF2-208ENST00000589788 C16orf70Q9BSU1 422 aa11.78□□□□□ -0.52
SDF2-208ENST00000589788 TUT1Q9H6E5 874 aaKnown RBP11.78□□□□□ -0.52
SDF2-208ENST00000589788 SLC9A2Q9UBY0 812 aa11.78□□□□□ -0.52
SDF2-208ENST00000589788 ZNF215Q9UL58 517 aaPredicted RBP11.78□□□□□ -0.52
SDF2-208ENST00000589788 FAM86B1E9PN63 330 aa11.77□□□□□ -0.53
SDF2-208ENST00000589788 HAS3O00219 553 aa11.77□□□□□ -0.53
SDF2-208ENST00000589788 DTNBO60941 627 aa11.77□□□□□ -0.53
SDF2-208ENST00000589788 F12P00748 615 aaPredicted RBP11.77□□□□□ -0.53
SDF2-208ENST00000589788 FAM86B2P0C5J1 330 aa11.77□□□□□ -0.53
SDF2-208ENST00000589788 ARP10275 920 aa11.77□□□□□ -0.53
SDF2-208ENST00000589788 CYP2C9P11712 490 aa11.77□□□□□ -0.53
SDF2-208ENST00000589788 TCF7P36402 384 aaPredicted RBP11.77□□□□□ -0.53
SDF2-208ENST00000589788 SETQ01105 290 aaPredicted RBP11.77□□□□□ -0.53
SDF2-208ENST00000589788 PPIGQ13427 754 aaKnown RBP eCLIP11.77□□□□□ -0.53
SDF2-208ENST00000589788 BFSP2Q13515 415 aa11.77□□□□□ -0.53
SDF2-208ENST00000589788 PTGISQ16647 500 aa11.77□□□□□ -0.53
SDF2-208ENST00000589788 CCDC155Q8N6L0 562 aa11.77□□□□□ -0.53
SDF2-208ENST00000589788 DAGLBQ8NCG7 672 aa11.77□□□□□ -0.53
SDF2-208ENST00000589788 NSUN7Q8NE18 718 aaKnown RBP11.77□□□□□ -0.53
SDF2-208ENST00000589788 CCDC97Q96F63 343 aaPredicted RBP11.77□□□□□ -0.53
SDF2-208ENST00000589788 PHF20Q9BVI0 1012 aa11.77□□□□□ -0.53
SDF2-208ENST00000589788 NOC4LQ9BVI4 516 aaKnown RBP11.77□□□□□ -0.53
SDF2-208ENST00000589788 AGO4Q9HCK5 861 aaKnown RBP11.77□□□□□ -0.53
SDF2-208ENST00000589788 JPH1Q9HDC5 661 aaPredicted RBP11.77□□□□□ -0.53
SDF2-208ENST00000589788 HDAC6Q9UBN7 1215 aa11.77□□□□□ -0.53
SDF2-208ENST00000589788 GTF2IRD1Q9UHL9 959 aa11.77□□□□□ -0.53
SDF2-208ENST00000589788 KCNJ14Q9UNX9 436 aa11.77□□□□□ -0.53
SDF2-208ENST00000589788 DNAH12Q6ZR08 3092 aa11.77□□□□□ -0.53
SDF2-208ENST00000589788 NFASCO94856 1347 aa11.76□□□□□ -0.53
SDF2-208ENST00000589788 IPO5O00410 1097 aaKnown RBP11.76□□□□□ -0.53
SDF2-208ENST00000589788 CSF2RAP15509 400 aa11.76□□□□□ -0.53
SDF2-208ENST00000589788 JUNDP17535 347 aa11.76□□□□□ -0.53
SDF2-208ENST00000589788 USP11P51784 963 aa11.76□□□□□ -0.53
SDF2-208ENST00000589788 CCL23P55773 120 aa11.76□□□□□ -0.53
SDF2-208ENST00000589788 TRIM29Q14134 588 aa11.76□□□□□ -0.53
SDF2-208ENST00000589788 NONOQ15233 471 aaKnown RBP eCLIP11.76□□□□□ -0.53
SDF2-208ENST00000589788 MSS51Q4VC12 460 aa11.76□□□□□ -0.53
SDF2-208ENST00000589788 PRR16Q569H4 304 aa11.76□□□□□ -0.53
SDF2-208ENST00000589788 GDF6Q6KF10 455 aaPredicted RBP11.76□□□□□ -0.53
SDF2-208ENST00000589788 KRT25Q7Z3Z0 450 aa11.76□□□□□ -0.53
SDF2-208ENST00000589788 TRIM50Q86XT4 487 aa11.76□□□□□ -0.53
SDF2-208ENST00000589788 RETREG2Q8NC44 543 aa11.76□□□□□ -0.53
SDF2-208ENST00000589788 TBCKQ8TEA7 893 aa11.76□□□□□ -0.53
SDF2-208ENST00000589788 CRYGNQ8WXF5 182 aa11.76□□□□□ -0.53
SDF2-208ENST00000589788 GLG1Q92896 1179 aa11.76□□□□□ -0.53
SDF2-208ENST00000589788 SH2B1Q9NRF2 756 aaPredicted RBP11.76□□□□□ -0.53
SDF2-208ENST00000589788 TCEAL9Q9UHQ7 104 aa11.76□□□□□ -0.53
SDF2-208ENST00000589788 TELO2Q9Y4R8 837 aa11.76□□□□□ -0.53
SDF2-208ENST00000589788 UMODL1Q5DID0 1318 aa11.75□□□□□ -0.53
SDF2-208ENST00000589788 IGLV3-22A0A075B6J6 115 aa11.75□□□□□ -0.53
SDF2-208ENST00000589788 CCDC194A0A1B0GVG4 234 aa11.75□□□□□ -0.53
SDF2-208ENST00000589788 GSTTP1A0A1W2PQM5 241 aa11.75□□□□□ -0.53
SDF2-208ENST00000589788 JAK2O60674 1132 aa11.75□□□□□ -0.53
SDF2-208ENST00000589788 SMIM10L2AP0DMW4 78 aa11.75□□□□□ -0.53
SDF2-208ENST00000589788 SMIM10L2BP0DMW5 78 aa11.75□□□□□ -0.53
SDF2-208ENST00000589788 FDPSP14324 419 aaKnown RBP11.75□□□□□ -0.53
SDF2-208ENST00000589788 CIITAP33076 1130 aa11.75□□□□□ -0.53
SDF2-208ENST00000589788 ACTR2P61160 394 aa11.75□□□□□ -0.53
SDF2-208ENST00000589788 VAC14Q08AM6 782 aa11.75□□□□□ -0.53
SDF2-208ENST00000589788 ITGB3BPQ13352 177 aaPredicted RBP11.75□□□□□ -0.53
SDF2-208ENST00000589788 SHHQ15465 462 aa11.75□□□□□ -0.53
SDF2-208ENST00000589788 NPY5RQ15761 445 aa11.75□□□□□ -0.53
SDF2-208ENST00000589788 CCDC83Q8IWF9 413 aa11.75□□□□□ -0.53
SDF2-208ENST00000589788 FAM160A2Q8N612 972 aaPredicted RBP11.75□□□□□ -0.53
SDF2-208ENST00000589788 ZNF577Q9BSK1 485 aa11.75□□□□□ -0.53
SDF2-208ENST00000589788 SMARCAD1Q9H4L7 1026 aa11.75□□□□□ -0.53
SDF2-208ENST00000589788 AZI2Q9H6S1 392 aa11.75□□□□□ -0.53
SDF2-208ENST00000589788 BRMS1Q9HCU9 246 aa11.75□□□□□ -0.53
SDF2-208ENST00000589788 KAT6AQ92794 2004 aa11.75□□□□□ -0.53
SDF2-208ENST00000589788 C17orf102A2RUQ5 167 aa11.74□□□□□ -0.53
SDF2-208ENST00000589788 M0R2N6 131 aa11.74□□□□□ -0.53
SDF2-208ENST00000589788 DDX39AO00148 427 aaKnown RBP11.74□□□□□ -0.53
SDF2-208ENST00000589788 GNAT1P11488 350 aa11.74□□□□□ -0.53
SDF2-208ENST00000589788 MARK3P27448 753 aa11.74□□□□□ -0.53
SDF2-208ENST00000589788 FXR1P51114 621 aaKnown RBP eCLIP11.74□□□□□ -0.53
SDF2-208ENST00000589788 EPHB4P54760 987 aa11.74□□□□□ -0.53
SDF2-208ENST00000589788 COPS2P61201 443 aa11.74□□□□□ -0.53
SDF2-208ENST00000589788 PTK7Q13308 1070 aa11.74□□□□□ -0.53
SDF2-208ENST00000589788 C9orf50Q5SZB4 431 aa11.74□□□□□ -0.53
SDF2-208ENST00000589788 CAGE1Q8TC20 777 aa11.74□□□□□ -0.53
SDF2-208ENST00000589788 ATP6V0A1Q93050 837 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms